Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 2.6e-272 941.4 464 100.0
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 6.3e-210 734.2 463 78.8
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 8.5e-207 723.8 457 78.3
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.1e-203 713.4 461 76.4
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.5e-203 713.0 461 76.4
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 2.0e-203 712.6 462 76.8
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 7.4e-203 710.7 461 76.1
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 2.6e-200 702.2 467 74.7
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 6.5e-199 697.6 461 74.6
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 7.2e-198 694.1 461 75.1
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.2e-197 693.3 461 74.8
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 1.6e-197 693.0 461 74.8
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 2.7e-197 692.2 461 75.3
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 3.6e-197 691.8 461 75.1
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 3.6e-197 691.8 461 74.8
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 4.4e-195 684.9 461 74.0
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 3.1e-193 678.7 461 72.7
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 1.0e-191 673.7 461 72.7
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.0e-191 671.4 476 71.6
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 6.5e-191 671.0 463 73.7
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 1.1e-190 670.2 461 73.3
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 1.2e-189 666.8 461 71.1
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 1.2e-189 666.8 465 71.4
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.6e-189 666.4 466 71.5
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 3.0e-188 662.1 461 70.7
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 5.2e-188 661.4 463 71.7
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 6.8e-188 661.0 461 70.7
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 1.5e-187 659.8 461 71.4
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 7.5e-187 657.5 461 70.9
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 9.8e-187 657.1 455 73.2
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 1.7e-186 656.4 462 70.6
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 6.3e-186 654.4 464 70.7
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 6.3e-186 654.4 462 70.3
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 1.1e-185 653.7 461 70.3
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 1.4e-185 653.3 478 70.1
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 2.4e-185 652.5 461 69.4
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 3.1e-185 652.1 470 69.1
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 7.0e-185 651.0 466 68.9
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 9.1e-185 650.6 465 71.0
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.6e-184 649.8 461 69.4
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.0e-184 649.4 461 69.6
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 7.7e-184 647.5 469 68.2
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 7.7e-184 647.5 475 68.8
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 7.7e-184 647.5 479 69.9
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 1.0e-183 647.1 465 69.0
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 2.3e-183 646.0 464 70.3
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 2.3e-183 646.0 467 69.2
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 3.8e-183 645.2 461 69.6
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 3.8e-183 645.2 462 70.8
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 5.0e-183 644.8 462 69.5
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 6.6e-183 644.4 465 68.4
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 8.6e-183 644.0 462 70.1
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 1.1e-182 643.7 465 70.8
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 1.2e-181 640.2 461 69.0
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 1.6e-181 639.8 462 69.3
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 2.8e-181 639.0 462 68.8
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 6.1e-181 637.9 462 70.1
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 8.0e-181 637.5 471 68.6
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 1.4e-180 636.7 462 68.8
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 1.8e-180 636.3 462 68.4
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 1.8e-180 636.3 464 70.5
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 6.8e-180 634.4 465 68.8
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 2.0e-179 632.9 465 68.6
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 3.4e-179 632.1 465 68.8
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 4.4e-179 631.7 464 68.5
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 4.4e-179 631.7 464 68.5
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 2.2e-178 629.4 462 68.0
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 2.9e-178 629.0 462 69.0
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 2.9e-178 629.0 462 67.3
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 6.4e-178 627.9 463 68.7
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 8.3e-178 627.5 459 69.1
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.1e-177 627.1 461 70.3
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 1.8e-177 626.3 462 67.3
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 4.1e-177 625.2 504 64.1
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 3.5e-176 622.1 462 68.0
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 5.0e-175 618.2 464 67.5
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.2e-173 613.6 435 71.3
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 1.2e-173 613.6 461 67.0
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 1.8e-172 609.8 461 66.6
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 1.8e-172 609.8 466 65.2
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 5.2e-172 608.2 461 66.6
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 2.0e-171 606.3 503 62.6
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 1.7e-170 603.2 451 68.1
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.2e-168 597.0 462 66.5
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 1.3e-167 593.6 458 64.0
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 9.5e-166 587.4 408 71.1
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 6.2e-165 584.7 461 66.4
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.2e-163 580.5 420 68.6
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.7e-162 576.6 481 63.0
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 2.2e-162 576.2 461 64.4
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 8.1e-157 557.8 461 61.8
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.3e-156 556.2 461 64.2
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 8.9e-156 554.3 433 65.8
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 8.4e-154 547.7 473 60.3
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 3.0e-143 512.7 469 58.0
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 2.0e-139 500.0 478 57.1
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 1.7e-138 496.9 426 61.7
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 4.8e-133 478.8 305 77.7
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 7.1e-129 464.9 453 51.9
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 4.5e-123 445.7 337 63.8
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 5.1e-119 432.2 276 75.0
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 3.7e-117 426.0 295 73.9
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 2.3e-111 406.8 307 66.8
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.2e-104 384.4 329 62.6
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.9e-100 368.6 342 58.8
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 1.8e-95 354.0 418 47.6
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 1.5e-94 350.9 462 42.9
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 5.5e-89 332.4 469 40.5
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 6.1e-88 328.9 464 44.4
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 1.8e-87 327.4 458 43.4
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 1.8e-87 327.4 389 50.4
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 2.0e-86 323.9 235 71.5
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 7.5e-86 322.0 463 40.4
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 8.8e-79 298.5 247 66.8
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 3.4e-78 296.6 234 60.7
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 8.3e-77 292.0 298 53.7
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 2.3e-66 257.3 263 51.0
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 3.0e-58 230.3 170 65.9
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 1.1e-49 201.8 174 62.1
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 7.5e-46 189.1 161 65.8
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 7.8e-43 179.1 126 73.0
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 6.6e-34 149.4 135 60.7
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 7.3e-33 146.0 131 58.0
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 2.8e-32 144.1 127 60.6
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 4.4e-30 136.7 136 55.9
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 4.9e-29 133.3 102 68.6
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 6.2e-24 116.3 418 26.6
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 1.5e-22 111.7 109 56.9
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 1.8e-15 88.2 177 37.3
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 5.3e-15 86.7 52 78.8
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 4.6e-11 73.6 109 43.1
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 2.5e-09 67.8 53 64.2


User provided reference genes

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