Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 3.2e-37 157.9 80 100.0
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 4.1e-24 114.4 79 72.2
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.2e-23 112.8 80 72.5
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.6e-23 111.7 80 71.2
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 6.5e-22 107.1 76 71.1
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.2e-21 104.8 81 70.4
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 4.2e-21 104.4 79 64.6
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 9.4e-21 103.2 80 65.0
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 1.6e-20 102.4 78 62.8
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 3.6e-20 101.3 78 62.8
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 4.7e-20 100.9 77 61.0
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 6.1e-20 100.5 77 67.5
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 6.1e-20 100.5 76 63.2
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 7.9e-20 100.1 79 62.0
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.4e-19 99.4 80 67.5
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.4e-19 99.4 80 67.5
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.8e-19 99.0 78 65.4
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 1.8e-19 99.0 81 67.9
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 2.3e-19 98.6 77 63.6
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 2.3e-19 98.6 77 59.7
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 2.3e-19 98.6 78 62.8
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 3.0e-19 98.2 78 65.4
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 5.1e-19 97.4 78 64.1
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 5.1e-19 97.4 84 64.3
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 6.7e-19 97.1 78 65.4
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.1e-18 96.3 75 60.0
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.1e-18 96.3 76 63.2
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 3.3e-18 94.7 78 64.1
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 4.4e-18 94.4 78 61.5
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.3e-17 92.8 80 62.5
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 2.2e-17 92.0 77 63.6
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.2e-17 92.0 80 62.5
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 1.8e-16 89.0 80 58.8
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 1.8e-16 89.0 80 61.2
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 3.1e-16 88.2 77 63.6
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 7.0e-16 87.0 78 55.1
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 1.2e-15 86.3 82 57.3
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 2.6e-15 85.1 75 54.7
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 4.5e-15 84.3 75 57.3
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 7.7e-15 83.6 66 62.1
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 1.0e-14 83.2 82 52.4
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 1.0e-14 83.2 82 54.9
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 5.0e-14 80.9 80 53.8
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 5.0e-14 80.9 78 53.8
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 5.0e-14 80.9 82 53.7
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 8.5e-14 80.1 73 61.6
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 8.5e-14 80.1 80 50.0
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 1.9e-13 79.0 75 56.0
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 2.5e-13 78.6 75 56.0
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 2.5e-13 78.6 78 56.4
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 5.5e-13 77.4 75 54.7
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 7.2e-13 77.0 79 49.4
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 9.4e-13 76.6 75 52.0
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 1.6e-12 75.9 78 51.3
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 2.1e-12 75.5 75 50.7
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 2.7e-12 75.1 78 50.0
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 2.7e-12 75.1 81 53.1
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.4e-11 72.8 86 45.3
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 1.8e-11 72.4 77 45.5
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 3.0e-11 71.6 80 47.5
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 3.0e-11 71.6 71 52.1
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 8.8e-11 70.1 78 47.4
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 8.8e-11 70.1 75 45.3
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 1.1e-10 69.7 75 50.7
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 2.0e-10 68.9 84 47.6
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 2.6e-10 68.6 76 47.4
Lalb_Chr13g0304241 Lupinus albus HOM05D007037 ORTHO05D006691 2.6e-10 68.6 79 46.8
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 4.4e-10 67.8 76 53.9
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 5.7e-10 67.4 81 46.9
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 7.5e-10 67.0 75 52.0
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 9.7e-10 66.6 77 46.8
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 1.3e-09 66.2 86 48.8
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.7e-09 65.9 79 46.8
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 1.7e-09 65.9 79 51.9
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 2.8e-09 65.1 79 43.0
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 3.7e-09 64.7 81 45.7
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 6.3e-09 63.9 78 47.4
CSS0005463 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 8.2e-09 63.5 94 41.5
unitig_32.g11533 Utricularia gibba HOM05D007037 ORTHO05D006691 8.2e-09 63.5 75 48.0
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 1.1e-08 63.2 78 47.4
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 1.8e-08 62.4 79 45.6
CiPaw.03G159600 Carya illinoinensis HOM05D007037 ORTHO05D006691 3.1e-08 61.6 85 45.9
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 4.1e-08 61.2 88 40.9
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 5.3e-08 60.8 76 46.1
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 7.0e-08 60.5 77 45.5
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 7.0e-08 60.5 84 45.2
AT1G11740 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 9.1e-08 60.1 76 44.7
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 9.1e-08 60.1 80 40.0
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 9.1e-08 60.1 76 44.7
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 9.1e-08 60.1 75 48.0
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 9.1e-08 60.1 78 46.2
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 1.2e-07 59.7 79 40.5
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 1.2e-07 59.7 61 52.5
Hund23465 Selenicereus undatus HOM05D007037 ORTHO05D006691 1.6e-07 59.3 75 48.0
AL1G22910 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 2.0e-07 58.9 76 43.4
Gohir.D11G101450 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.7e-07 58.5 77 44.2
Gorai.007G108200 Gossypium raimondii HOM05D007037 ORTHO05D006691 2.7e-07 58.5 77 44.2
AL2G13860 Arabidopsis lyrata HOM05D007037 ORTHO05D006691 3.5e-07 58.2 76 46.1
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 3.5e-07 58.2 61 50.8
DCAR_019271 Daucus carota HOM05D007037 ORTHO05D006691 3.5e-07 58.2 83 44.6
Gorai.013G189700 Gossypium raimondii HOM05D007037 ORTHO05D006691 3.5e-07 58.2 75 46.7
Os03g0574600 Oryza sativa ssp. japonica HOM05D007037 ORTHO05D006691 3.5e-07 58.2 80 45.0
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 4.5e-07 57.8 61 49.2
ECA236G1425 Erigeron canadensis HOM05D007037 ORTHO05D006691 7.7e-07 57.0 80 43.8
Rhsim02G0106600 Rhododendron simsii HOM05D007037 ORTHO05D006691 7.7e-07 57.0 90 38.9
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 7.7e-07 57.0 62 56.5
Aqoxy4G01827 Aquilegia oxysepala HOM05D009550 ORTHO05D006691 1.0e-06 56.6 84 46.4
Gohir.A11G096766 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.0e-06 56.6 77 42.9
Nn1g07147 Nelumbo nucifera HOM05D009550 ORTHO05D006691 1.0e-06 56.6 86 40.7
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 1.3e-06 56.2 77 41.6
AT1G62045 Arabidopsis thaliana HOM05D007037 ORTHO05D006691 3.8e-06 54.7 76 43.4
Migut.I00058 Erythranthe guttata HOM05D003533 ORTHO05D004009 3.8e-06 54.7 71 42.3
Sp5g13860 Schrenkiella parvula HOM05D003533 ORTHO05D004009 5.0e-06 54.3 71 42.3
ATR0712G042 Amborella trichopoda HOM05D003533 ORTHO05D004009 6.5e-06 53.9 83 39.8
unitig_748.g7588 Utricularia gibba HOM05D007037 ORTHO05D006691 8.5e-06 53.5 80 40.0


User provided reference genes

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