Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025246.1 Olea europaea HOM05D000604 ORTHO05D004512 8.8e-63 243.4 121 100.0
Oeu025244.1 Olea europaea HOM05D000604 ORTHO05D004512 8.5e-42 173.7 95 87.4
Migut.J00575 Erythranthe guttata HOM05D000604 ORTHO05D004512 1.5e-41 172.9 95 87.4
Oeu026653.1 Olea europaea HOM05D000604 ORTHO05D004512 1.9e-41 172.6 92 91.3
Ah.04g159950 Amaranthus hybridus HOM05D000604 ORTHO05D004512 9.5e-41 170.2 95 85.3
Oeu028231.1 Olea europaea HOM05D000604 ORTHO05D004512 1.2e-40 169.9 95 86.3
MSTRG.18261 Avicennia marina HOM05D000604 ORTHO05D004512 1.6e-40 169.5 95 85.3
Solyc01g098350.3 Solanum lycopersicum HOM05D000604 ORTHO05D004512 2.1e-40 169.1 95 86.3
Sopen01g041910 Solanum pennellii HOM05D000604 ORTHO05D004512 2.1e-40 169.1 95 86.3
EL10Ac4g09280 Beta vulgaris HOM05D000604 ORTHO05D004512 2.8e-40 168.7 95 85.3
PGSC0003DMG400022453 Solanum tuberosum HOM05D000604 ORTHO05D004512 2.8e-40 168.7 95 85.3
Oeu052139.1 Olea europaea HOM05D000604 ORTHO05D004512 8.0e-40 167.2 95 85.3
arahy.Tifrunner.gnm1.ann1.EVL1N6 Arachis hypogaea HOM05D000604 ORTHO05D004512 1.4e-39 166.4 95 83.2
arahy.Tifrunner.gnm1.ann1.LQ82RV Arachis hypogaea HOM05D000604 ORTHO05D004512 1.4e-39 166.4 95 83.2
Peaxi162Scf00225g00622 Petunia axillaris HOM05D000604 ORTHO05D004512 1.4e-39 166.4 95 84.2
SalBow6G2614 Salvia bowleyana HOM05D000604 ORTHO05D004512 1.4e-39 166.4 95 83.2
Lj9A677G36 Lonicera japonica HOM05D000604 ORTHO05D004512 2.3e-39 165.6 95 84.2
Nn3g21243 Nelumbo nucifera HOM05D000604 ORTHO05D004512 4.0e-39 164.9 95 82.1
Nn8g38559 Nelumbo nucifera HOM05D000604 ORTHO05D004512 4.0e-39 164.9 95 82.1
vmacro19657 Vaccinium macrocarpon HOM05D000604 ORTHO05D004512 4.0e-39 164.9 95 82.1
SGA_v2.0_scaffold192G40625 Striga asiatica HOM05D000604 ORTHO05D004512 5.2e-39 164.5 95 83.2
CAN.G134.221 Capsicum annuum HOM05D000604 ORTHO05D004512 1.2e-38 163.3 95 83.2
CSS0015734 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D004512 1.5e-38 162.9 95 82.1
CSS0037056 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D004512 1.5e-38 162.9 95 82.1
CSS0048299 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D004512 1.5e-38 162.9 95 82.1
Lalb_Chr21g0310821 Lupinus albus HOM05D000604 ORTHO05D004512 2.0e-38 162.5 95 81.1
Nitab4.5_0000245g0230 Nicotiana tabacum HOM05D000604 ORTHO05D004512 2.0e-38 162.5 109 77.1
Nitab4.5_0001165g0020 Nicotiana tabacum HOM05D000604 ORTHO05D004512 2.0e-38 162.5 95 83.2
Phvul.007G183500 Phaseolus vulgaris HOM05D000604 ORTHO05D004512 2.0e-38 162.5 95 80.0
VMungo0720G1625 Vigna mungo HOM05D000604 ORTHO05D004512 2.0e-38 162.5 95 80.0
Rhsim05G0146600 Rhododendron simsii HOM05D000604 ORTHO05D004512 2.6e-38 162.2 95 81.1
Dinv01785 Davidia involucrata HOM05D000604 ORTHO05D004512 4.4e-38 161.4 95 82.1
Glyma.10G158100 Glycine max HOM05D000604 ORTHO05D004512 7.5e-38 160.6 95 78.9
Glyma.20G230500 Glycine max HOM05D000604 ORTHO05D004512 7.5e-38 160.6 95 78.9
Medtr5g055170 Medicago truncatula HOM05D000604 ORTHO05D004512 7.5e-38 160.6 95 78.9
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 7.5e-38 160.6 95 80.0
Hund07022 Selenicereus undatus HOM05D000604 ORTHO05D004512 7.5e-38 160.6 95 83.2
Aqoxy3G00886 Aquilegia oxysepala HOM05D000604 ORTHO05D004512 1.3e-37 159.8 95 80.0
Medtr5g010140 Medicago truncatula HOM05D000604 ORTHO05D004512 1.3e-37 159.8 94 79.8
Nn4g26073 Nelumbo nucifera HOM05D000604 ORTHO05D004512 1.3e-37 159.8 95 80.0
TPR.G6694 Trifolium pratense HOM05D000604 ORTHO05D004512 1.3e-37 159.8 95 78.9
DCAR_020452 Daucus carota HOM05D000604 ORTHO05D004512 1.7e-37 159.5 95 77.9
Aqoxy1G02180 Aquilegia oxysepala HOM05D000604 ORTHO05D004512 2.2e-37 159.1 95 80.0
Hma1.2p1_0071F.1_g037955 Hydrangea macrophylla HOM05D000604 ORTHO05D004512 2.2e-37 159.1 94 81.9
Aa31LG5G9440 Aethionema arabicum HOM05D000604 ORTHO05D004512 2.8e-37 158.7 92 79.3
CiPaw.02G127200 Carya illinoinensis HOM05D000604 ORTHO05D004512 2.8e-37 158.7 95 80.0
ECA232G0151 Erigeron canadensis HOM05D000604 ORTHO05D004512 2.8e-37 158.7 95 80.0
Lj3g0003298 Lotus japonicus HOM05D000604 ORTHO05D004512 2.8e-37 158.7 94 78.7
THA.LOC104826738 Tarenaya hassleriana HOM05D000604 ORTHO05D004512 2.8e-37 158.7 92 80.4
Actinidia19814 Actinidia chinensis HOM05D000604 ORTHO05D004512 3.7e-37 158.3 94 79.8
PGR031G1961 Punica granatum HOM05D000604 ORTHO05D004512 3.7e-37 158.3 95 78.9
Sc16g0008250 Simmondsia chinensis HOM05D000604 ORTHO05D004512 3.7e-37 158.3 95 80.0
QL06p022999 Quercus lobata HOM05D000604 ORTHO05D004512 4.9e-37 157.9 95 77.9
QL11p023874 Quercus lobata HOM05D000604 ORTHO05D004512 4.9e-37 157.9 95 77.9
CANSAT01G1793 Cannabis sativa HOM05D000604 ORTHO05D004512 6.3e-37 157.5 94 78.7
CANSAT54G2755 Cannabis sativa HOM05D000604 ORTHO05D004512 6.3e-37 157.5 94 78.7
GSVIVG01020870001 Vitis vinifera HOM05D000604 ORTHO05D004512 6.3e-37 157.5 95 78.9
Sed0027198 Sechium edule HOM05D000604 ORTHO05D004512 8.3e-37 157.1 95 78.9
Actinidia28390 Actinidia chinensis HOM05D000604 ORTHO05D004512 1.1e-36 156.8 94 79.8
Gohir.A01G133500 Gossypium hirsutum HOM05D000604 ORTHO05D004512 1.1e-36 156.8 92 80.4
Gohir.D01G117700 Gossypium hirsutum HOM05D000604 ORTHO05D004512 1.1e-36 156.8 92 80.4
Gorai.002G143200 Gossypium raimondii HOM05D000604 ORTHO05D004512 1.1e-36 156.8 92 80.4
MBI18_g38867_MAGBIO Magnolia biondii HOM05D000604 ORTHO05D004512 1.4e-36 156.4 94 80.9
Sp4g07260 Schrenkiella parvula HOM05D000604 ORTHO05D004512 1.4e-36 156.4 92 78.3
unitig_750.g28505 Utricularia gibba HOM05D000604 ORTHO05D004512 1.4e-36 156.4 92 82.6
HPP92_017559 Vanilla planifolia HOM05D000604 ORTHO05D004512 1.4e-36 156.4 95 76.8
Ca_02808_v3 Cicer arietinum L. HOM05D000604 ORTHO05D004512 1.8e-36 156.0 95 77.9
Sp1g23300 Schrenkiella parvula HOM05D000604 ORTHO05D004512 1.8e-36 156.0 92 78.3
Atru.chr12.650 Acer truncatum HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 79.3
Atru.chr12.677 Acer truncatum HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 79.3
AL4G19120 Arabidopsis lyrata HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
AT2G26430 Arabidopsis thaliana HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
A07p12190 Brassica napus HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
C07p18150 Brassica napus HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
BolC7t42325H Brassica oleracea HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
BraA07t29003Z Brassica rapa HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
Carub.0004s0633 Capsella rubella HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
CARHR118360 Cardamine hirsuta HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
CDE05G3027 Ceratophyllum demersum HOM05D000604 ORTHO05D004512 2.4e-36 155.6 95 77.9
CDE11G1039 Ceratophyllum demersum HOM05D000604 ORTHO05D004512 2.4e-36 155.6 95 77.9
Cc02_g32830 Coffea canephora HOM05D000604 ORTHO05D004512 2.4e-36 155.6 91 81.3
Thhalv10007728m.g Eutrema salsugineum HOM05D000604 ORTHO05D004512 2.4e-36 155.6 92 77.2
Lsat_1_v5_gn_9_71340 Lactuca sativa HOM05D002827 ORTHO05D004512 2.4e-36 155.6 94 78.7
MD12G1227500 Malus domestica HOM05D000604 ORTHO05D004512 2.4e-36 155.6 94 78.7
PSO161G0104 Papaver somniferum HOM05D000604 ORTHO05D004512 2.4e-36 155.6 100 76.0
TWI38G0373 Tripterygium wilfordii HOM05D000604 ORTHO05D004512 2.4e-36 155.6 95 77.9
TAR633G1789 Trochodendron aralioides HOM05D000604 ORTHO05D004512 2.4e-36 155.6 95 76.8
TAR633G2382 Trochodendron aralioides HOM05D000604 ORTHO05D004512 2.4e-36 155.6 95 76.8
AUR62000905 Chenopodium quinoa HOM05D000604 ORTHO05D004512 3.1e-36 155.2 97 79.4
AUR62005070 Chenopodium quinoa HOM05D000604 ORTHO05D004512 3.1e-36 155.2 97 79.4
Duzib128G0428 Durio zibethinus HOM05D000604 ORTHO05D004512 3.1e-36 155.2 92 79.3
Eucgr.H04430 Eucalyptus grandis HOM05D000604 ORTHO05D004512 3.1e-36 155.2 95 80.0
Cpa.g.sc81.66 Carica papaya HOM05D000604 ORTHO05D004512 4.1e-36 154.8 91 80.2
ClCG03G016990 Citrullus lanatus HOM05D000604 ORTHO05D004512 4.1e-36 154.8 95 76.8
Hma1.2p1_0702F.1_g206100 Hydrangea macrophylla HOM05D000604 ORTHO05D004512 7.0e-36 154.1 94 79.8
Prupe.6G333200 Prunus persica HOM05D000604 ORTHO05D004512 7.0e-36 154.1 94 77.7
RcHm_v2.0_Chr3g0453411 Rosa chinensis HOM05D000604 ORTHO05D004512 7.0e-36 154.1 94 76.6
MD04G1213300 Malus domestica HOM05D000604 ORTHO05D004512 9.2e-36 153.7 94 77.7
Manes.08G028200 Manihot esculenta HOM05D000604 ORTHO05D004512 9.2e-36 153.7 95 75.8
CsaV3_1G038950 Cucumis sativus L. HOM05D000604 ORTHO05D004512 1.2e-35 153.3 95 76.8
Migut.N00466 Erythranthe guttata HOM05D000604 ORTHO05D004512 2.0e-35 152.5 91 79.1
CiPaw.01G204800 Carya illinoinensis HOM05D000604 ORTHO05D004512 2.7e-35 152.1 94 77.7
Thecc.10G069000 Theobroma cacao HOM05D000604 ORTHO05D004512 2.7e-35 152.1 92 77.2
Haze_25104 Corylus avellana HOM05D000258 ORTHO05D000153 4.5e-35 151.4 95 75.8
FvH4_6g04870 Fragaria vesca HOM05D000604 ORTHO05D004512 7.8e-35 150.6 94 74.5
FAN09G4787 Fragaria x ananassa HOM05D000604 ORTHO05D004512 7.8e-35 150.6 94 74.5
FAN14G1660 Fragaria x ananassa HOM05D000604 ORTHO05D004512 7.8e-35 150.6 94 74.5
FAN14G4098 Fragaria x ananassa HOM05D000604 ORTHO05D004512 7.8e-35 150.6 94 74.5
Potri.008G043600 Populus trichocarpa HOM05D000604 ORTHO05D004512 7.8e-35 150.6 95 73.7
Zm00001eb307170 Zea mays HOM05D000604 ORTHO05D004512 7.8e-35 150.6 94 74.5
VMungo0720G1622 Vigna mungo HOM05D000604 ORTHO05D004512 1.0e-34 150.2 95 71.6
Zm00001eb048550 Zea mays HOM05D000604 ORTHO05D004512 1.3e-34 149.8 94 73.4
Cfa002807 Carpinus fangiana HOM05D000604 ORTHO05D004512 1.7e-34 149.4 95 74.7
FAN05G3414 Fragaria x ananassa HOM05D000604 ORTHO05D004512 1.7e-34 149.4 94 73.4
FAN05G3826 Fragaria x ananassa HOM05D000604 ORTHO05D004512 1.7e-34 149.4 94 73.4
Psat2g184680 Pisum sativum HOM05D000604 ORTHO05D004512 1.7e-34 149.4 92 77.2
Os01g0377500 Oryza sativa ssp. japonica HOM05D000604 ORTHO05D004512 5.0e-34 147.9 91 73.6
Ciclev10031535m.g Citrus clementina HOM05D000604 ORTHO05D004512 8.6e-34 147.1 92 76.1
SHI08941 Sapria himalayana HOM05D000604 ORTHO05D004512 8.6e-34 147.1 95 73.7
Sabra08G0030100 Salix brachista HOM05D000604 ORTHO05D004512 1.1e-33 146.7 91 74.7
Thhalv10027406m.g Eutrema salsugineum HOM05D000604 ORTHO05D004512 1.5e-33 146.4 95 73.7
QL07p023602 Quercus lobata HOM05D000604 ORTHO05D004512 1.5e-33 146.4 95 73.7
COL.COLO4_23726 Corchorus olitorius HOM05D000604 ORTHO05D004512 1.9e-33 146.0 93 76.3
HanXRQChr15g0464271 Helianthus annuus HOM05D000604 ORTHO05D004512 3.6e-32 141.7 95 71.6
Lj6C238T5 Lonicera japonica HOM05D000604 ORTHO05D004512 1.4e-31 139.8 90 74.4
Peaxi162Scf00690g00025 Petunia axillaris HOM05D003992 ORTHO05D004329 3.0e-31 138.7 95 70.5
ATR0706G007 Amborella trichopoda HOM05D000604 ORTHO05D004512 4.0e-31 138.3 88 76.1
Lj6C237G2 Lonicera japonica HOM05D000604 ORTHO05D004512 5.2e-31 137.9 95 70.5
Ca_14509_v3 Cicer arietinum L. HOM05D000604 ORTHO05D004512 6.8e-31 137.5 124 58.9
Peaxi162Scf00132g00024 Petunia axillaris HOM05D000604 ORTHO05D004512 2.6e-30 135.6 95 68.4
Lj6P238T8 Lonicera japonica HOM05D000604 ORTHO05D004512 4.4e-30 134.8 92 70.7
Migut.K01229 Erythranthe guttata HOM05D000604 ORTHO05D004512 7.5e-30 134.0 74 86.5
Peaxi162Scf00202g00034 Petunia axillaris HOM05D000604 ORTHO05D004512 2.4e-28 129.0 95 66.3
Prupe.7G087700 Prunus persica HOM05D000604 ORTHO05D004512 3.2e-28 128.6 98 68.4
CBR_g41142 Chara braunii HOM05D000604 ORTHO05D004512 4.1e-28 128.3 94 69.1
Pp3c9_26180 Physcomitrium patens HOM05D000604 ORTHO05D004512 5.4e-28 127.9 94 67.0
Mapoly0037s0071 Marchantia polymorpha HOM05D000604 ORTHO05D004512 1.2e-27 126.7 88 68.2
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 2.7e-27 125.6 86 74.4
Pp3c15_25980 Physcomitrium patens HOM05D000604 ORTHO05D004512 3.5e-27 125.2 94 66.0
AagrBONN_evm.TU.Sc2ySwM_344.3972 Anthoceros agrestis HOM05D000604 ORTHO05D004512 7.8e-27 124.0 94 64.9
QL01p038682 Quercus lobata HOM05D000604 ORTHO05D004512 4.7e-24 114.8 108 53.7
Lsat_1_v5_gn_0_34680 Lactuca sativa HOM05D000604 ORTHO05D004512 4.0e-23 111.7 94 54.3
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 5.8e-22 107.8 95 58.9
GSVIVG01029422001 Vitis vinifera HOM05D000604 ORTHO05D004512 8.3e-21 104.0 65 73.8
Lsat_1_v5_gn_8_124580 Lactuca sativa HOM05D000604 ORTHO05D004512 1.1e-20 103.6 95 53.7
MCO04G357 Micromonas commoda HOM05D000604 ORTHO05D004512 1.1e-20 103.6 89 52.8
Lsat_1_v5_gn_8_124560 Lactuca sativa HOM05D000604 ORTHO05D004512 2.4e-20 102.4 95 52.6
Nitab4.5_0005181g0060 Nicotiana tabacum HOM05D000604 ORTHO05D004512 3.5e-19 98.6 93 57.0
PGSC0003DMG400003689 Solanum tuberosum HOM05D000604 ORTHO05D004512 1.3e-18 96.7 94 55.3
FAN14G1953 Fragaria x ananassa HOM05D000604 ORTHO05D004512 3.9e-18 95.1 94 53.2
Lj6C239T2 Lonicera japonica HOM05D000604 ORTHO05D004512 5.0e-18 94.7 65 69.2
CAN.G389.5 Capsicum annuum HOM05D000604 ORTHO05D004512 8.6e-18 94.0 58 77.6
Nitab4.5_0002186g0110 Nicotiana tabacum HOM05D000604 ORTHO05D004512 1.9e-17 92.8 70 62.9
SMO287G0022 Selaginella moellendorffii HOM05D000604 ORTHO05D004512 9.5e-17 90.5 105 49.5
AUR62036638 Chenopodium quinoa HOM05D000604 ORTHO05D004512 1.6e-16 89.7 48 85.4
QL05p050082 Quercus lobata HOM05D000604 ORTHO05D004512 2.0e-14 82.8 57 70.2
Lj6A239T12 Lonicera japonica HOM05D000604 ORTHO05D004512 2.2e-13 79.3 43 86.0
Cre07.g321650 Chlamydomonas reinhardtii HOM05D000604 ORTHO05D004512 3.2e-12 75.5 98 43.9
C05p25700 Brassica napus HOM05D000604 ORTHO05D004512 2.1e-11 72.8 83 45.8
SEGI_09045 Sequoiadendron giganteum HOM05D000604 ORTHO05D004512 2.7e-11 72.4 48 66.7
FAN02G4461 Fragaria x ananassa HOM05D000604 ORTHO05D004512 1.3e-10 70.1 46 69.6
Sabra10G0168700 Salix brachista HOM05D000604 ORTHO05D004512 2.3e-10 69.3 48 64.6
SMO171G0100 Selaginella moellendorffii HOM05D000604 ORTHO05D004512 2.3e-10 69.3 129 36.4
Pp3c14_26890 Physcomitrium patens HOM05D000604 ORTHO05D004512 1.1e-09 67.0 95 41.1
EL10Ac4g09282 Beta vulgaris HOM05D000604 ORTHO05D004512 1.9e-09 66.2 37 83.8
Peaxi162Scf01056g00011 Petunia axillaris HOM05D000604 ORTHO05D004512 2.5e-09 65.9 44 65.9
PRCOL_00003844 Prasinoderma coloniale HOM05D000604 ORTHO05D004512 9.5e-09 63.9 92 44.6
SEGI_04759 Sequoiadendron giganteum HOM05D000604 ORTHO05D004512 1.6e-08 63.2 34 79.4
A09p38800 Brassica napus HOM05D000604 ORTHO05D004512 3.4e-06 55.5 28 78.6
ATR1149G096 Amborella trichopoda HOM05D000604 ORTHO05D004512 7.6e-06 54.3 48 52.1


User provided reference genes

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