Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025165.1 Olea europaea HOM05D008194 ORTHO05D010811 6.8e-185 650.6 343 100.0
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 2.3e-140 502.7 271 99.6
Oeu025164.1 Olea europaea HOM05D000283 ORTHO05D010811 2.3e-140 502.7 271 99.6
Sopen00g013510 Solanum pennellii HOM05D008194 ORTHO05D010811 4.0e-28 129.8 72 90.3
Solyc00g244290.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 2.6e-27 127.1 72 88.9
Solyc00g500316.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 2.6e-27 127.1 72 88.9
arahy.Tifrunner.gnm1.ann1.6G4HZT Arachis hypogaea HOM05D008194 ORTHO05D010811 1.3e-26 124.8 72 86.1
arahy.Tifrunner.gnm1.ann1.C43PR6 Arachis hypogaea HOM05D008194 ORTHO05D010811 1.3e-26 124.8 72 86.1
arahy.Tifrunner.gnm1.ann1.L892YY Arachis hypogaea HOM05D008194 ORTHO05D010811 9.3e-25 118.6 65 90.8
Peaxi162Scf00040g01212 Petunia axillaris HOM05D008194 ORTHO05D010811 9.3e-25 118.6 65 92.3
Nitab4.5_0000172g1790 Nicotiana tabacum HOM05D008194 ORTHO05D010811 1.0e-23 115.2 70 82.9
Nitab4.5_0000172g0130 Nicotiana tabacum HOM05D008194 ORTHO05D010811 1.3e-23 114.8 72 80.6
Nitab4.5_0000172g1570 Nicotiana tabacum HOM05D008194 ORTHO05D010811 3.0e-23 113.6 65 89.2
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 3.9e-23 113.2 259 38.6
Thhalv10015951m.g Eutrema salsugineum HOM05D006493 ORTHO05D009864 3.3e-22 110.2 66 83.3
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 6.2e-21 105.9 303 32.3
Peaxi162Scf00286g00017 Petunia axillaris HOM05D008194 ORTHO05D010811 6.2e-21 105.9 62 85.5
GSVIVG01007203001 Vitis vinifera HOM05D006493 ORTHO05D009864 1.1e-20 105.1 66 80.3
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 6.9e-20 102.4 247 34.8
CsaV3_UNG208120 Cucumis sativus L. HOM05D008194 ORTHO05D010811 3.4e-19 100.1 54 94.4
Peaxi162Scf00373g00823 Petunia axillaris HOM05D008194 ORTHO05D010811 3.4e-19 100.1 54 94.4
RcHm_v2.0_MTg0498491 Rosa chinensis HOM05D008194 ORTHO05D010811 3.4e-19 100.1 54 94.4
PGR069G0009 Punica granatum HOM05D006493 ORTHO05D009864 1.3e-18 98.2 51 96.1
CDE02G4414 Ceratophyllum demersum HOM05D006493 ORTHO05D009864 2.2e-18 97.4 54 90.7
Hma1.2p1_0580F.1_g182760 Hydrangea macrophylla HOM05D008194 ORTHO05D010811 2.9e-18 97.1 54 92.6
Lsat_1_v5_gn_0_38140 Lactuca sativa HOM05D008194 ORTHO05D010811 2.9e-18 97.1 54 92.6
LjContig00439g0001200 Lotus japonicus HOM05D008194 ORTHO05D010811 2.9e-18 97.1 54 92.6
LjContig00439g0021834 Lotus japonicus HOM05D008194 ORTHO05D010811 2.9e-18 97.1 54 92.6
Nitab4.5_0008300g0050 Nicotiana tabacum HOM05D008194 ORTHO05D010811 3.8e-18 96.7 61 77.0
Lalb_Chr10g0094521 Lupinus albus HOM05D008194 ORTHO05D010811 1.1e-17 95.1 54 88.9
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 1.9e-17 94.4 256 31.6
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 3.2e-17 93.6 234 35.5
Nn1g10151 Nelumbo nucifera HOM05D006493 ORTHO05D009864 9.3e-17 92.0 51 92.2
Nitab4.5_0008300g0040 Nicotiana tabacum HOM05D008194 ORTHO05D010811 9.3e-17 92.0 77 62.3
Potri.007G062542 Populus trichocarpa HOM05D008194 ORTHO05D010811 1.2e-16 91.7 54 90.7
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 2.7e-16 90.5 58 81.0
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 2.7e-16 90.5 254 34.6
Nitab4.5_0000055g0320 Nicotiana tabacum HOM05D008194 ORTHO05D010811 7.9e-16 89.0 72 68.1
Aa31csc239G70 Aethionema arabicum HOM05D008194 ORTHO05D010811 1.0e-15 88.6 48 93.8
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 1.7e-15 87.8 290 32.1
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 2.3e-15 87.4 258 33.3
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 6.6e-15 85.9 317 29.7
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 3.3e-14 83.6 214 34.1
SHI34940 Sapria himalayana HOM05D008194 ORTHO05D010811 7.3e-14 82.4 72 61.1
Glyma.01G136800 Glycine max HOM05D008194 ORTHO05D010811 2.1e-13 80.9 54 75.9
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 3.6e-13 80.1 323 30.3
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 4.8e-13 79.7 263 27.8
SGA_v2.0_scaffold60G20995 Striga asiatica HOM05D000283 ORTHO05D006673 1.2e-11 75.1 300 29.0
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 1.2e-11 75.1 279 27.6
Solyc04g010180.4 Solanum lycopersicum HOM05D000283 ORTHO05D006673 2.2e-10 70.9 150 37.3
HanXRQChr07g0188931 Helianthus annuus HOM05D006493 ORTHO05D009864 4.9e-10 69.7 44 84.1
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 1.4e-09 68.2 228 28.5
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 3.2e-09 67.0 217 30.4
Solyc03g063510.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 4.2e-09 66.6 36 86.1
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 9.3e-09 65.5 141 34.0
Haze_16971 Corylus avellana HOM05D000283 ORTHO05D006673 1.2e-08 65.1 130 36.9
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 1.2e-08 65.1 220 25.5
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 1.6e-08 64.7 204 32.8
MD01G1117200 Malus domestica HOM05D000283 ORTHO05D006673 2.1e-08 64.3 228 27.6
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.7e-08 63.9 227 33.5
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 2.7e-08 63.9 194 28.9
Actinidia29198 Actinidia chinensis HOM05D000283 ORTHO05D006673 3.5e-08 63.5 211 29.9
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 3.5e-08 63.5 215 27.0
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 4.6e-08 63.2 226 32.3
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 4.6e-08 63.2 258 29.5
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 4.6e-08 63.2 102 33.3
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 7.9e-08 62.4 223 25.6
Cpa.g.sc1.301 Carica papaya HOM05D000283 ORTHO05D006673 1.3e-07 61.6 230 28.7
Nitab4.5_0001781g0110 Nicotiana tabacum HOM05D001560 ORTHO05D010811 5.1e-07 59.7 30 93.3
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 8.7e-07 58.9 124 33.1
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 1.9e-06 57.8 201 30.3
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 2.5e-06 57.4 295 24.7
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 3.3e-06 57.0 92 37.0
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 3.3e-06 57.0 194 26.3
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 4.3e-06 56.6 100 36.0
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 5.6e-06 56.2 224 26.8
Potri.008G047600 Populus trichocarpa HOM05D000283 ORTHO05D006673 9.6e-06 55.5 233 28.3
THA.LOC104809887 Tarenaya hassleriana HOM05D000283 ORTHO05D006673 9.6e-06 55.5 274 27.0


User provided reference genes

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