Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 8.8e-90 333.6 165 100.0
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 9.2e-63 243.8 165 70.3
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 2.7e-62 242.3 164 70.7
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 2.7e-62 242.3 165 69.1
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 4.6e-62 241.5 165 69.7
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 7.8e-62 240.7 165 70.3
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 1.3e-61 240.0 165 68.5
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 3.0e-61 238.8 165 69.7
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 3.9e-61 238.4 165 69.1
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 5.0e-61 238.0 165 67.3
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 5.0e-61 238.0 165 68.5
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 6.6e-61 237.7 165 69.1
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 6.6e-61 237.7 165 69.1
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 2.5e-60 235.7 165 67.9
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 1.2e-59 233.4 173 67.1
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 3.6e-59 231.9 165 66.7
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 3.6e-59 231.9 165 66.7
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 4.7e-59 231.5 164 66.5
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 4.7e-59 231.5 165 68.5
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 6.2e-59 231.1 165 67.3
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 6.2e-59 231.1 165 66.7
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 1.0e-58 230.3 164 65.9
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 1.0e-58 230.3 165 65.5
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 1.0e-58 230.3 165 66.7
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 1.0e-58 230.3 165 66.7
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 1.4e-58 229.9 165 66.7
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 1.4e-58 229.9 165 66.1
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 1.8e-58 229.6 165 65.5
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 1.8e-58 229.6 165 67.3
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 5.2e-58 228.0 165 66.1
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 6.8e-58 227.6 165 66.1
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 1.2e-57 226.9 164 65.2
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 1.5e-57 226.5 165 65.5
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 2.6e-57 225.7 165 64.8
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 7.5e-57 224.2 165 64.8
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 1.3e-56 223.4 165 64.8
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 2.2e-56 222.6 165 65.5
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 2.9e-56 222.2 165 61.2
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 4.9e-56 221.5 165 63.6
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 6.4e-56 221.1 165 64.8
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 1.1e-55 220.3 165 64.8
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 1.9e-55 219.5 165 63.0
Actinidia02025 Actinidia chinensis HOM05D006617 ORTHO05D008247 2.4e-55 219.2 182 61.0
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.4e-55 219.2 165 64.8
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 3.2e-55 218.8 165 64.8
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 4.1e-55 218.4 165 63.0
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 5.4e-55 218.0 165 64.2
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 5.4e-55 218.0 165 64.2
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 5.4e-55 218.0 165 63.0
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 9.2e-55 217.2 164 62.8
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 9.2e-55 217.2 165 66.7
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 9.2e-55 217.2 165 63.6
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 9.2e-55 217.2 165 64.2
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 9.2e-55 217.2 165 63.0
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 4.6e-54 214.9 165 61.2
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 4.6e-54 214.9 158 62.7
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 1.0e-53 213.8 165 62.4
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 1.3e-53 213.4 165 58.8
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 1.3e-53 213.4 165 61.2
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 2.3e-53 212.6 165 58.8
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 2.3e-53 212.6 165 58.8
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 3.9e-53 211.8 165 63.0
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 8.6e-53 210.7 166 60.8
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 8.6e-53 210.7 166 61.4
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 8.6e-53 210.7 166 61.4
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.5e-52 209.9 158 64.6
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 1.9e-52 209.5 165 58.8
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 4.3e-52 208.4 165 58.8
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 4.3e-52 208.4 165 58.8
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 4.3e-52 208.4 165 58.8
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 7.3e-52 207.6 165 58.8
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 2.1e-51 206.1 166 60.2
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 1.1e-50 203.8 166 60.2
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 4.0e-50 201.8 164 62.8
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 8.9e-50 200.7 165 61.2
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 9.8e-49 197.2 137 68.6
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.7e-48 196.4 139 68.3
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 2.2e-48 196.1 139 68.3
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 6.4e-48 194.5 165 58.8
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.4e-47 193.4 139 68.3
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 7.1e-47 191.0 127 73.2
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 1.6e-46 189.9 165 53.9
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 1.7e-45 186.4 137 65.0
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 1.7e-45 186.4 165 53.9
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 3.0e-45 185.7 135 65.9
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 1.2e-43 180.3 165 52.1
CARHR126330 Cardamine hirsuta HOM05D006617 ORTHO05D008247 4.0e-42 175.3 134 61.2
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 4.0e-42 175.3 137 62.0
Aqoxy7G00382 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 1.7e-40 169.9 133 60.2
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 2.2e-40 169.5 121 66.9
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 5.4e-39 164.9 165 47.9
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 2.7e-38 162.5 160 47.5
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 2.5e-36 156.0 137 56.2
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 1.6e-35 153.3 137 55.5
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 8.9e-34 147.5 100 68.0
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 1.3e-29 133.7 165 48.5
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 3.0e-29 132.5 106 58.5
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 2.1e-22 109.8 160 33.8
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 1.8e-21 106.7 161 35.4
Glyma.05G087800 Glycine max HOM05D006617 ORTHO05D008247 2.5e-20 102.8 79 62.0
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 4.8e-19 98.6 54 75.9
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 6.2e-19 98.2 159 32.7
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 6.2e-19 98.2 72 68.1
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 1.6e-11 73.6 46 67.4
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 1.6e-11 73.6 157 26.8
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 2.8e-11 72.8 136 30.1
Pp3c8_19270 Physcomitrium patens HOM05D006617 ORTHO05D008247 4.0e-10 68.9 162 24.7
MD14G1098400 Malus domestica HOM05D006617 ORTHO05D008247 3.4e-09 65.9 69 52.2
PRCOL_00003136 Prasinoderma coloniale HOM05D006617 ORTHO05D008247 1.0e-08 64.3 163 28.8
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 6.5e-08 61.6 36 69.4


User provided reference genes

Program Settings