Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025050.1 Olea europaea HOM05D002258 ORTHO05D023285 1.5e-37 159.1 86 100.0
Actinidia34464 Actinidia chinensis HOM05D002258 ORTHO05D002539 7.7e-13 77.0 84 59.5
Dinv13143 Davidia involucrata HOM05D002258 ORTHO05D002539 1.3e-12 76.3 73 63.0
Cc01_g14460 Coffea canephora HOM05D002258 ORTHO05D002539 1.7e-12 75.9 73 65.8
Rhsim13G0067700 Rhododendron simsii HOM05D002258 ORTHO05D002539 5.0e-12 74.3 67 73.1
GSVIVG01003935001 Vitis vinifera HOM05D002258 ORTHO05D002539 1.5e-11 72.8 79 60.8
CAN.G583.9 Capsicum annuum HOM05D002258 ORTHO05D002539 1.9e-11 72.4 58 69.0
Nitab4.5_0000967g0120 Nicotiana tabacum HOM05D002258 ORTHO05D002539 4.2e-11 71.2 72 56.9
TAR633G2642 Trochodendron aralioides HOM05D002258 ORTHO05D002539 4.2e-11 71.2 86 60.5
Thecc.09G351700 Theobroma cacao HOM05D002258 ORTHO05D002539 5.5e-11 70.9 42 90.5
Duzib168G0033 Durio zibethinus HOM05D002258 ORTHO05D002539 7.2e-11 70.5 80 63.8
Potri.001G278900 Populus trichocarpa HOM05D002258 ORTHO05D002539 7.2e-11 70.5 82 61.0
CiPaw.13G074700 Carya illinoinensis HOM05D002258 ORTHO05D002539 2.8e-10 68.6 80 57.5
Hma1.2p1_1981F.1_g309900 Hydrangea macrophylla HOM05D002258 ORTHO05D002539 4.7e-10 67.8 87 57.5
Gohir.D13G238800 Gossypium hirsutum HOM05D002258 ORTHO05D002539 6.1e-10 67.4 43 83.7
Duzib150G0478 Durio zibethinus HOM05D002258 ORTHO05D002539 8.0e-10 67.0 81 60.5
Rhsim01G0238400 Rhododendron simsii HOM05D002258 ORTHO05D339870 1.4e-09 66.2 86 55.8
CSS0021772 Camellia sinensis var. sinensis HOM05D002258 ORTHO05D002539 1.8e-09 65.9 66 66.7
CSS0047562 Camellia sinensis var. sinensis HOM05D002258 ORTHO05D002539 1.8e-09 65.9 66 66.7
Gorai.013G269700 Gossypium raimondii HOM05D002258 ORTHO05D002539 2.3e-09 65.5 57 71.9
TAR623G0441 Trochodendron aralioides HOM05D002258 ORTHO05D002539 2.3e-09 65.5 75 60.0
Ciclev10029223m.g Citrus clementina HOM05D002258 ORTHO05D002539 3.0e-09 65.1 62 69.4
PGSC0003DMG400020543 Solanum tuberosum HOM05D002258 ORTHO05D002539 3.0e-09 65.1 71 57.7
Nn2g10905 Nelumbo nucifera HOM05D002258 ORTHO05D002539 4.0e-09 64.7 80 56.2
Nitab4.5_0000839g0090 Nicotiana tabacum HOM05D002258 ORTHO05D002539 4.0e-09 64.7 74 62.2
TAR369G0550 Trochodendron aralioides HOM05D002258 ORTHO05D002539 4.0e-09 64.7 73 56.2
Gohir.A13G233200 Gossypium hirsutum HOM05D002258 ORTHO05D002539 5.2e-09 64.3 51 72.5
ECA248G1236 Erigeron canadensis HOM05D002258 ORTHO05D002539 6.8e-09 63.9 48 77.1
Potri.009G073400 Populus trichocarpa HOM05D002258 ORTHO05D002539 8.9e-09 63.5 80 55.0
Sed0024051 Sechium edule HOM05D002258 ORTHO05D002539 8.9e-09 63.5 74 56.8
COL.COLO4_11098 Corchorus olitorius HOM05D002258 ORTHO05D002539 2.0e-08 62.4 79 55.7
COL.COLO4_14505 Corchorus olitorius HOM05D002258 ORTHO05D023285 2.0e-08 62.4 74 55.4
MELO3C020533.2 Cucumis melo HOM05D002258 ORTHO05D002539 2.0e-08 62.4 53 71.7
Dinv28663 Davidia involucrata HOM05D002258 ORTHO05D002539 2.0e-08 62.4 79 54.4
Nitab4.5_0008458g0030 Nicotiana tabacum HOM05D002258 ORTHO05D002539 2.0e-08 62.4 72 52.8
COL.COLO4_03382 Corchorus olitorius HOM05D002258 ORTHO05D002539 2.6e-08 62.0 74 55.4
Sabra09G0055500 Salix brachista HOM05D002258 ORTHO05D002539 2.6e-08 62.0 80 52.5
Ca_10655_v3 Cicer arietinum L. HOM05D002258 ORTHO05D002539 3.4e-08 61.6 51 62.7
Duzib128G1084 Durio zibethinus HOM05D002258 ORTHO05D002539 3.4e-08 61.6 73 53.4
Eucgr.J01894 Eucalyptus grandis HOM05D002258 ORTHO05D002539 3.4e-08 61.6 77 58.4
Medtr1g097600 Medicago truncatula HOM05D002258 ORTHO05D002539 4.4e-08 61.2 81 49.4
Nn2g13180 Nelumbo nucifera HOM05D002258 ORTHO05D002539 4.4e-08 61.2 74 58.1
Sc08g0005490 Simmondsia chinensis HOM05D002258 ORTHO05D002539 4.4e-08 61.2 80 55.0
TWI31G0462 Tripterygium wilfordii HOM05D002258 ORTHO05D002539 4.4e-08 61.2 38 86.8
arahy.Tifrunner.gnm1.ann1.0CNB81 Arachis hypogaea HOM05D002258 ORTHO05D002539 5.7e-08 60.8 47 70.2
CANSAT54G0866 Cannabis sativa HOM05D002258 ORTHO05D002539 5.7e-08 60.8 43 76.7
Cfa011726 Carpinus fangiana HOM05D002258 ORTHO05D002539 5.7e-08 60.8 73 54.8
CiPaw.14G057400 Carya illinoinensis HOM05D002258 ORTHO05D002539 5.7e-08 60.8 39 84.6
Duzib093G1065 Durio zibethinus HOM05D002258 ORTHO05D002539 5.7e-08 60.8 73 52.1
Lalb_Chr03g0035601 Lupinus albus HOM05D002258 ORTHO05D002539 5.7e-08 60.8 74 54.1
Lalb_Chr19g0130041 Lupinus albus HOM05D002258 ORTHO05D002539 5.7e-08 60.8 65 63.1
Actinidia23221 Actinidia chinensis HOM05D002258 ORTHO05D002539 7.5e-08 60.5 71 56.3
Aa31LG5G6640 Aethionema arabicum HOM05D002258 ORTHO05D002539 7.5e-08 60.5 85 50.6
ClCG03G000590 Citrullus lanatus HOM05D002258 ORTHO05D002539 7.5e-08 60.5 39 82.1
MELO3C020534.2 Cucumis melo HOM05D002258 ORTHO05D002539 7.5e-08 60.5 79 55.7
Nitab4.5_0005694g0040 Nicotiana tabacum HOM05D002258 ORTHO05D002539 7.5e-08 60.5 41 80.5
Thecc.05G012300 Theobroma cacao HOM05D002258 ORTHO05D002539 7.5e-08 60.5 76 56.6
Cpa.g.sc120.59 Carica papaya HOM05D002258 ORTHO05D002539 9.8e-08 60.1 71 54.9
CsaV3_1G036350 Cucumis sativus L. HOM05D002258 ORTHO05D002539 9.8e-08 60.1 76 55.3
CsaV3_1G036360 Cucumis sativus L. HOM05D002258 ORTHO05D002539 9.8e-08 60.1 54 68.5
Eucgr.B02236 Eucalyptus grandis HOM05D002258 ORTHO05D002539 9.8e-08 60.1 70 57.1
HanXRQChr01g0011731 Helianthus annuus HOM05D002258 ORTHO05D002539 9.8e-08 60.1 74 58.1
Potri.006G102400 Populus trichocarpa HOM05D002258 ORTHO05D002539 9.8e-08 60.1 80 51.2
PGR102G1166 Punica granatum HOM05D002258 ORTHO05D002539 9.8e-08 60.1 42 73.8
QL07p035000 Quercus lobata HOM05D002258 ORTHO05D002539 9.8e-08 60.1 57 66.7
Atru.chr3.4172 Acer truncatum HOM05D002258 ORTHO05D002539 1.3e-07 59.7 86 58.1
Manes.18G136500 Manihot esculenta HOM05D002258 ORTHO05D002539 1.3e-07 59.7 80 55.0
arahy.Tifrunner.gnm1.ann1.C683QH Arachis hypogaea HOM05D002258 ORTHO05D002539 1.7e-07 59.3 47 68.1
Cpa.g.sc2.431 Carica papaya HOM05D002258 ORTHO05D002539 1.7e-07 59.3 41 75.6
Duzib170G1020 Durio zibethinus HOM05D002258 ORTHO05D002539 1.7e-07 59.3 43 74.4
QL06p050723 Quercus lobata HOM05D002258 ORTHO05D002539 1.7e-07 59.3 76 56.6
Sed0025680 Sechium edule HOM05D002258 ORTHO05D002539 1.7e-07 59.3 75 54.7
TWI77G0019 Tripterygium wilfordii HOM05D002258 ORTHO05D002539 2.2e-07 58.9 73 52.1
CSS0029378 Camellia sinensis var. sinensis HOM05D002258 ORTHO05D002539 2.8e-07 58.5 73 61.6
CSS0036996 Camellia sinensis var. sinensis HOM05D002258 ORTHO05D002539 2.8e-07 58.5 73 61.6
Actinidia32633 Actinidia chinensis HOM05D002258 ORTHO05D023285 3.7e-07 58.2 63 66.7
Gohir.A05G107400 Gossypium hirsutum HOM05D002258 ORTHO05D002539 3.7e-07 58.2 80 53.8
Gorai.009G111700 Gossypium raimondii HOM05D002258 ORTHO05D002539 3.7e-07 58.2 56 67.9
Sopen06g033510 Solanum pennellii HOM05D002258 ORTHO05D002539 3.7e-07 58.2 73 57.5
PGSC0003DMG400030368 Solanum tuberosum HOM05D002258 ORTHO05D002539 3.7e-07 58.2 73 58.9
Peaxi162Scf00540g00126 Petunia axillaris HOM05D002258 ORTHO05D002539 4.9e-07 57.8 75 56.0
TWI75G0191 Tripterygium wilfordii HOM05D002258 ORTHO05D002539 4.9e-07 57.8 75 54.7
Haze_24364 Corylus avellana HOM05D002258 ORTHO05D002539 6.3e-07 57.4 80 50.0
Lsat_1_v5_gn_5_172701 Lactuca sativa HOM05D002258 ORTHO05D002539 6.3e-07 57.4 57 64.9
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 8.3e-07 57.0 87 52.9
Potri.016G119800 Populus trichocarpa HOM05D002258 ORTHO05D002539 8.3e-07 57.0 80 47.5
Solyc06g082120.4 Solanum lycopersicum HOM05D002258 ORTHO05D002539 8.3e-07 57.0 69 58.0
Manes.09G106600 Manihot esculenta HOM05D002258 ORTHO05D002539 1.1e-06 56.6 73 52.1
arahy.Tifrunner.gnm1.ann1.MZRF0M Arachis hypogaea HOM05D002258 ORTHO05D002539 1.4e-06 56.2 61 55.7
BcaB03g13403 Brassica carinata HOM05D002258 ORTHO05D002539 1.4e-06 56.2 43 69.8
A08p35740 Brassica napus HOM05D002258 ORTHO05D002539 1.4e-06 56.2 43 69.8
BolC5t29292H Brassica oleracea HOM05D002258 ORTHO05D002539 1.4e-06 56.2 43 69.8
BraA08t35481Z Brassica rapa HOM05D002258 ORTHO05D002539 1.4e-06 56.2 43 69.8
Gorai.004G232500 Gossypium raimondii HOM05D002258 ORTHO05D002539 1.4e-06 56.2 47 70.2
MBI03_g05509_MAGBIO Magnolia biondii HOM05D002258 ORTHO05D002539 1.4e-06 56.2 45 64.4
Manes.08G094200 Manihot esculenta HOM05D002258 ORTHO05D002539 1.4e-06 56.2 78 47.4
TPR.G19682 Trifolium pratense HOM05D002258 ORTHO05D002539 1.4e-06 56.2 82 47.6
VMungo0720G1136 Vigna mungo HOM05D002258 ORTHO05D002539 1.4e-06 56.2 44 63.6
EL10Ac9g22380 Beta vulgaris HOM05D002258 ORTHO05D002539 1.8e-06 55.8 56 64.3
Gohir.D05G107600 Gossypium hirsutum HOM05D002258 ORTHO05D002539 1.8e-06 55.8 43 72.1
Gohir.D08G218500 Gossypium hirsutum HOM05D002258 ORTHO05D002539 1.8e-06 55.8 43 69.8
AT2G30060 Arabidopsis thaliana HOM05D002258 ORTHO05D002539 2.4e-06 55.5 50 62.0
MBI03_g05507_MAGBIO Magnolia biondii HOM05D002258 ORTHO05D002539 2.4e-06 55.5 68 55.9
arahy.Tifrunner.gnm1.ann1.SW24RX Arachis hypogaea HOM05D002258 ORTHO05D002539 3.1e-06 55.1 63 55.6
Phvul.007G084300 Phaseolus vulgaris HOM05D002258 ORTHO05D002539 3.1e-06 55.1 42 69.0
A10p05660 Brassica napus HOM05D002258 ORTHO05D002539 4.1e-06 54.7 42 69.0
C05p05210 Brassica napus HOM05D002258 ORTHO05D002539 4.1e-06 54.7 43 67.4
C08p02930 Brassica napus HOM05D002258 ORTHO05D002539 4.1e-06 54.7 42 69.0
BolC8t47092H Brassica oleracea HOM05D002258 ORTHO05D002539 4.1e-06 54.7 42 69.0
BraA10t42827Z Brassica rapa HOM05D002258 ORTHO05D002539 4.1e-06 54.7 42 69.0
PGR010G0003 Punica granatum HOM05D002258 ORTHO05D002539 4.1e-06 54.7 64 56.2
PGR119G1176 Punica granatum HOM05D002258 ORTHO05D002539 4.1e-06 54.7 64 56.2
Sp1g05900 Schrenkiella parvula HOM05D002258 ORTHO05D002539 4.1e-06 54.7 43 67.4
BcaC07g42024 Brassica carinata HOM05D002258 ORTHO05D002539 5.4e-06 54.3 43 67.4
BcaC07g42447 Brassica carinata HOM05D002258 ORTHO05D002539 5.4e-06 54.3 43 67.4
BraA09t41998Z Brassica rapa HOM05D002258 ORTHO05D002539 5.4e-06 54.3 43 67.4
CSS0036857 Camellia sinensis var. sinensis HOM05D002258 ORTHO05D023285 5.4e-06 54.3 66 59.1
Lj5g0024818 Lotus japonicus HOM05D002258 ORTHO05D002539 5.4e-06 54.3 64 53.1
Sc18g0003370 Simmondsia chinensis HOM05D002258 ORTHO05D002539 5.4e-06 54.3 44 68.2
THA.LOC104826282 Tarenaya hassleriana HOM05D002258 ORTHO05D002539 5.4e-06 54.3 48 62.5
CARHR123360 Cardamine hirsuta HOM05D002258 ORTHO05D002539 7.0e-06 53.9 82 48.8
Lalb_Chr01g0009821 Lupinus albus HOM05D002258 ORTHO05D002539 7.0e-06 53.9 81 50.6
Hund08113 Selenicereus undatus HOM05D002258 ORTHO05D002539 7.0e-06 53.9 39 76.9
GSVIVG01024705001 Vitis vinifera HOM05D002258 ORTHO05D002539 9.2e-06 53.5 35 82.9


User provided reference genes

Program Settings