Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025020.1 Olea europaea HOM05D005061 ORTHO05D006001 7.0e-68 260.8 159 100.0
SGA_v2.0_scaffold90G27899 Striga asiatica HOM05D005061 ORTHO05D006001 8.4e-29 131.0 138 55.8
SalBow8G4870 Salvia bowleyana HOM05D005061 ORTHO05D006001 1.4e-28 130.2 143 55.2
Migut.G00717 Erythranthe guttata HOM05D005061 ORTHO05D006001 4.1e-28 128.6 139 53.2
SGA_v2.0_scaffold128G34119 Striga asiatica HOM05D005061 ORTHO05D006001 7.1e-28 127.9 143 53.8
Dinv38211 Davidia involucrata HOM05D005061 ORTHO05D006001 3.0e-26 122.5 146 54.8
MSTRG.9809 Avicennia marina HOM05D005061 ORTHO05D006001 3.3e-25 119.0 144 61.8
Hma1.2p1_0383F.1_g140630 Hydrangea macrophylla HOM05D005061 ORTHO05D006001 1.6e-24 116.7 150 52.7
unitig_26.g9510 Utricularia gibba HOM05D005061 ORTHO05D006001 4.0e-23 112.1 136 50.7
vmacro15554 Vaccinium macrocarpon HOM05D005061 ORTHO05D006001 1.2e-22 110.5 140 57.1
ECA247G1905 Erigeron canadensis HOM05D005061 ORTHO05D006001 2.0e-22 109.8 143 46.2
Lj8A15T45 Lonicera japonica HOM05D005061 ORTHO05D006001 5.8e-22 108.2 137 47.4
CSS0003459 Camellia sinensis var. sinensis HOM05D005061 ORTHO05D006001 8.4e-21 104.4 143 44.1
Prupe.1G159300 Prunus persica HOM05D005061 ORTHO05D006001 4.2e-20 102.1 126 53.2
Rhsim02G0060400 Rhododendron simsii HOM05D005061 ORTHO05D006001 4.2e-20 102.1 146 45.2
Cc03_g08040 Coffea canephora HOM05D005061 ORTHO05D006001 5.4e-20 101.7 150 43.3
MD14G1080700 Malus domestica HOM05D005061 ORTHO05D006001 7.1e-20 101.3 130 52.3
TAR624G0493 Trochodendron aralioides HOM05D002455 ORTHO05D006001 7.1e-20 101.3 127 46.5
CDE07G0811 Ceratophyllum demersum HOM05D005061 ORTHO05D006001 9.3e-20 100.9 141 43.3
COL.COLO4_20183 Corchorus olitorius HOM05D005061 ORTHO05D006001 9.3e-20 100.9 131 45.0
Gohir.D10G140500 Gossypium hirsutum HOM05D005061 ORTHO05D006001 2.7e-19 99.4 126 45.2
Gorai.011G156100 Gossypium raimondii HOM05D005061 ORTHO05D006001 2.7e-19 99.4 126 45.2
FAN22G0582 Fragaria x ananassa HOM05D005061 ORTHO05D006001 3.5e-19 99.0 135 56.3
PSO675G5536 Papaver somniferum HOM05D005061 ORTHO05D006001 3.5e-19 99.0 103 50.5
CDE04G1543 Ceratophyllum demersum HOM05D005061 ORTHO05D006001 6.0e-19 98.2 116 45.7
Eucgr.G02600 Eucalyptus grandis HOM05D005061 ORTHO05D006001 6.0e-19 98.2 103 65.0
FAN17G0047 Fragaria x ananassa HOM05D005061 ORTHO05D006001 6.0e-19 98.2 135 54.8
MD12G1086100 Malus domestica HOM05D005061 ORTHO05D006001 6.0e-19 98.2 126 56.3
PSO541G4502 Papaver somniferum HOM05D005061 ORTHO05D006001 6.0e-19 98.2 103 50.5
Manes.02G208300 Manihot esculenta HOM05D005061 ORTHO05D006001 1.3e-18 97.1 110 46.4
FAN07G0218 Fragaria x ananassa HOM05D005061 ORTHO05D006001 1.7e-18 96.7 135 55.6
Manes.10G081400 Manihot esculenta HOM05D005061 ORTHO05D006001 2.3e-18 96.3 110 46.4
Psat6g003280 Pisum sativum HOM05D005061 ORTHO05D006001 2.3e-18 96.3 116 43.1
TAR636G2803 Trochodendron aralioides HOM05D005061 ORTHO05D006001 3.0e-18 95.9 126 43.7
RcHm_v2.0_Chr4g0414321 Rosa chinensis HOM05D005061 ORTHO05D006001 5.1e-18 95.1 126 57.1
MSTRG.4232 Avicennia marina HOM05D005061 ORTHO05D006001 6.6e-18 94.7 143 46.9
FvH4_4g13570 Fragaria vesca HOM05D005061 ORTHO05D006001 8.7e-18 94.4 135 54.8
Lalb_Chr01g0000091 Lupinus albus HOM05D005061 ORTHO05D006001 8.7e-18 94.4 134 39.6
Lj1g0014719 Lotus japonicus HOM05D005061 ORTHO05D006001 1.1e-17 94.0 129 45.0
Lj1g0023949 Lotus japonicus HOM05D005061 ORTHO05D006001 1.1e-17 94.0 129 45.0
PGR042G2541 Punica granatum HOM05D005061 ORTHO05D006001 1.5e-17 93.6 143 44.8
TPR.G1371 Trifolium pratense HOM05D005061 ORTHO05D006001 1.5e-17 93.6 134 41.0
TPR.G26387 Trifolium pratense HOM05D005061 ORTHO05D006001 1.5e-17 93.6 137 40.1
Glyma.08G364400 Glycine max HOM05D005061 ORTHO05D006001 2.5e-17 92.8 139 42.4
Glyma.18G297700 Glycine max HOM05D005061 ORTHO05D006001 2.5e-17 92.8 112 44.6
Migut.N00403 Erythranthe guttata HOM05D005061 ORTHO05D006001 3.3e-17 92.4 118 48.3
Cpa.g.sc170.49 Carica papaya HOM05D005061 ORTHO05D006001 7.3e-17 91.3 127 41.7
Psat3g206160 Pisum sativum HOM05D005061 ORTHO05D006001 3.6e-16 89.0 129 53.5
Ca_04063_v3 Cicer arietinum L. HOM05D005061 ORTHO05D006001 4.8e-16 88.6 116 56.0
Ca_04069_v3 Cicer arietinum L. HOM05D005061 ORTHO05D006001 4.8e-16 88.6 116 56.0
Gohir.A10G126200 Gossypium hirsutum HOM05D005061 ORTHO05D006001 8.1e-16 87.8 126 41.3
Medtr7g407030 Medicago truncatula HOM05D005061 ORTHO05D006001 8.1e-16 87.8 102 58.8
Aa31LG11G8230 Aethionema arabicum HOM05D005061 ORTHO05D006001 2.4e-15 86.3 120 45.8
CANSAT78G0571 Cannabis sativa HOM05D005061 ORTHO05D006001 3.1e-15 85.9 126 52.4
Thhalv10004918m.g Eutrema salsugineum HOM05D005061 ORTHO05D006001 3.1e-15 85.9 114 43.9
BcaC06g30707 Brassica carinata HOM05D005061 ORTHO05D006001 5.3e-15 85.1 137 40.1
Cpa.g.sc150.53 Carica papaya HOM05D005061 ORTHO05D006001 5.3e-15 85.1 140 45.0
BraA06t26765Z Brassica rapa HOM05D005061 ORTHO05D006001 9.0e-15 84.3 137 40.1
BcaB07g34141 Brassica carinata HOM05D005061 ORTHO05D006001 1.2e-14 84.0 128 49.2
BcaC03g17706 Brassica carinata HOM05D005061 ORTHO05D006001 2.6e-14 82.8 116 44.8
C02p57130 Brassica napus HOM05D005061 ORTHO05D006001 2.6e-14 82.8 116 44.8
HanXRQChr13g0420931 Helianthus annuus HOM05D005061 ORTHO05D006001 2.6e-14 82.8 147 40.1
Atru.chr4.1292 Acer truncatum HOM05D005061 ORTHO05D006001 3.4e-14 82.4 128 40.6
QL07p041720 Quercus lobata HOM05D005061 ORTHO05D006001 3.4e-14 82.4 147 49.7
CAN.G765.25 Capsicum annuum HOM05D005061 ORTHO05D006001 4.4e-14 82.0 143 49.0
AL8G22790 Arabidopsis lyrata HOM05D005061 ORTHO05D006001 5.8e-14 81.6 106 44.3
A06p38500 Brassica napus HOM05D005061 ORTHO05D006001 5.8e-14 81.6 137 38.0
BcaNung02589 Brassica carinata HOM05D005061 ORTHO05D006001 1.3e-13 80.5 137 38.7
C07p39760 Brassica napus HOM05D005061 ORTHO05D006001 1.3e-13 80.5 137 38.7
BolC2t11785H Brassica oleracea HOM05D005061 ORTHO05D006001 1.3e-13 80.5 113 52.2
Solyc05g053730.3 Solanum lycopersicum HOM05D005061 ORTHO05D006001 1.3e-13 80.5 147 39.5
Sopen05g032210 Solanum pennellii HOM05D005061 ORTHO05D006001 1.3e-13 80.5 147 39.5
Duzib212G0867 Durio zibethinus HOM05D005061 ORTHO05D006001 1.7e-13 80.1 102 42.2
Aqoxy1G01140 Aquilegia oxysepala HOM05D005061 ORTHO05D006001 2.2e-13 79.7 143 43.4
AT5G49210 Arabidopsis thaliana HOM05D005061 ORTHO05D006001 2.2e-13 79.7 106 43.4
BolC7t44502H Brassica oleracea HOM05D005061 ORTHO05D006001 2.2e-13 79.7 135 41.5
Carub.0008s0903 Capsella rubella HOM05D005061 ORTHO05D006001 2.9e-13 79.3 114 41.2
Thecc.04G199600 Theobroma cacao HOM05D005061 ORTHO05D006001 2.9e-13 79.3 102 42.2
AUR62006500 Chenopodium quinoa HOM05D005061 ORTHO05D006001 3.8e-13 79.0 137 40.1
PGSC0003DMG400015756 Solanum tuberosum HOM05D005061 ORTHO05D006001 4.9e-13 78.6 147 36.7
HPP92_021062 Vanilla planifolia HOM05D005061 ORTHO05D006001 4.9e-13 78.6 102 40.2
CARHR182460 Cardamine hirsuta HOM05D005061 ORTHO05D006001 1.4e-12 77.0 106 42.5
Medtr1g025570 Medicago truncatula HOM05D005061 ORTHO05D006001 3.2e-12 75.9 116 36.2
Nitab4.5_0003502g0080 Nicotiana tabacum HOM05D005061 ORTHO05D006001 4.2e-12 75.5 111 44.1
BcaB07g34140 Brassica carinata HOM05D005061 ORTHO05D006001 5.4e-12 75.1 131 44.3
TWI34G0245 Tripterygium wilfordii HOM05D005061 ORTHO05D006001 5.4e-12 75.1 107 56.1
Os11g0148600 Oryza sativa ssp. japonica HOM05D005061 ORTHO05D006001 2.1e-11 73.2 129 39.5
Oeu006186.1 Olea europaea HOM05D005061 ORTHO05D006001 2.7e-11 72.8 45 91.1
EL10Ac9g22415 Beta vulgaris HOM05D005061 ORTHO05D006001 3.5e-11 72.4 137 38.7
EL10Ac9g22416 Beta vulgaris HOM05D005061 ORTHO05D006001 3.5e-11 72.4 137 38.0
CSS0041532 Camellia sinensis var. sinensis HOM05D005061 ORTHO05D006001 3.5e-11 72.4 120 46.7
CSS0044809 Camellia sinensis var. sinensis HOM05D005061 ORTHO05D006001 3.5e-11 72.4 120 46.7
Ciclev10005973m.g Citrus clementina HOM05D005061 ORTHO05D006001 3.5e-11 72.4 93 40.9
Peaxi162Scf00423g00316 Petunia axillaris HOM05D005061 ORTHO05D006001 3.5e-11 72.4 152 36.8
Nitab4.5_0002260g0170 Nicotiana tabacum HOM05D005061 ORTHO05D006001 7.9e-11 71.2 109 43.1
BraA02t08777Z Brassica rapa HOM05D005061 ORTHO05D006001 1.0e-10 70.9 116 44.8
Sp2g19580 Schrenkiella parvula HOM05D005061 ORTHO05D006001 1.3e-10 70.5 90 45.6
Sed0002608 Sechium edule HOM05D005061 ORTHO05D006001 1.3e-10 70.5 91 38.5
AUR62025033 Chenopodium quinoa HOM05D005061 ORTHO05D006001 1.7e-10 70.1 95 43.2
TWI34G1372 Tripterygium wilfordii HOM05D005061 ORTHO05D006001 1.7e-10 70.1 107 53.3
Ah.09g228330 Amaranthus hybridus HOM05D005061 ORTHO05D006001 2.3e-10 69.7 116 39.7
Sabra16G0200700 Salix brachista HOM05D005061 ORTHO05D006001 2.3e-10 69.7 87 55.2
VMungo1383G0426 Vigna mungo HOM05D005061 ORTHO05D006001 5.1e-10 68.6 91 41.8
Atru.chr4.1296 Acer truncatum HOM05D005061 ORTHO05D006001 6.6e-10 68.2 129 36.4
A02p37930 Brassica napus HOM05D005061 ORTHO05D006001 8.7e-10 67.8 116 44.8
Potri.001G317300 Populus trichocarpa HOM05D005061 ORTHO05D006001 1.1e-09 67.4 87 55.2
Phvul.008G004900 Phaseolus vulgaris HOM05D005061 ORTHO05D006001 1.9e-09 66.6 91 40.7
CiPaw.01G118900 Carya illinoinensis HOM05D005061 ORTHO05D006001 2.5e-09 66.2 96 54.2
Haze_11630 Corylus avellana HOM05D005061 ORTHO05D006001 3.3e-09 65.9 94 40.4
Hund18997 Selenicereus undatus HOM05D005061 ORTHO05D006001 4.3e-09 65.5 126 35.7
BcaB04g19598 Brassica carinata HOM05D005061 ORTHO05D006001 5.6e-09 65.1 97 42.3
arahy.Tifrunner.gnm1.ann1.16QZ2B Arachis hypogaea HOM05D001164 ORTHO05D026902 7.3e-09 64.7 89 44.9
Lsat_1_v5_gn_6_60821 Lactuca sativa HOM05D005061 ORTHO05D006001 9.6e-09 64.3 90 44.4
Zm00001eb092840 Zea mays HOM05D005061 ORTHO05D006001 1.3e-08 63.9 102 37.3
Cfa014943 Carpinus fangiana HOM05D005061 ORTHO05D006001 1.6e-08 63.5 93 39.8
arahy.Tifrunner.gnm1.ann1.B38FIW Arachis hypogaea HOM05D005061 ORTHO05D006001 2.1e-08 63.2 69 42.0
arahy.Tifrunner.gnm1.ann1.V03Z72 Arachis hypogaea HOM05D005061 ORTHO05D006001 2.1e-08 63.2 69 42.0
Dinv27216 Davidia involucrata HOM05D005061 ORTHO05D006001 2.8e-08 62.8 81 43.2
Lsat_1_v5_gn_2_46320 Lactuca sativa HOM05D005061 ORTHO05D006001 6.2e-08 61.6 82 41.5
Sc19g0007290 Simmondsia chinensis HOM05D005061 ORTHO05D006001 6.2e-08 61.6 82 39.0
Actinidia23412 Actinidia chinensis HOM05D005061 ORTHO05D006001 1.1e-07 60.8 78 46.2
THA.LOC104808705 Tarenaya hassleriana HOM05D005061 ORTHO05D006001 2.4e-07 59.7 71 39.4
CsaV3_3G010880 Cucumis sativus L. HOM05D005061 ORTHO05D006001 3.1e-07 59.3 142 31.7
QL01p037004 Quercus lobata HOM05D005061 ORTHO05D006001 4.0e-07 58.9 147 36.7
GSVIVG01020921001 Vitis vinifera HOM05D005061 ORTHO05D006001 2.6e-06 56.2 77 40.3
Lj3P401T12 Lonicera japonica HOM05D005061 ORTHO05D006001 9.9e-06 54.3 101 52.5


User provided reference genes

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