Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024984.1 Olea europaea HOM05D005252 ORTHO05D006788 2.0e-25 118.2 56 100.0
Oeu060821.2 Olea europaea HOM05D005252 ORTHO05D006788 2.9e-21 104.4 50 96.0
SGA_v2.0_scaffold115G32046 Striga asiatica HOM05D005252 ORTHO05D006788 3.5e-14 80.9 50 74.0
Potri.004G081400 Populus trichocarpa HOM05D005252 ORTHO05D006788 1.0e-13 79.3 50 68.0
Dinv19082 Davidia involucrata HOM05D000783 ORTHO05D000705 1.3e-13 79.0 50 70.0
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 1.3e-13 79.0 50 68.0
Lj2C511T2 Lonicera japonica HOM05D005252 ORTHO05D006788 1.7e-13 78.6 50 68.0
MBI06_g19632_MAGBIO Magnolia biondii HOM05D005252 ORTHO05D006788 3.0e-13 77.8 50 66.0
Sabra04G0054100 Salix brachista HOM05D005252 ORTHO05D006788 3.0e-13 77.8 50 66.0
SalBow5G4252 Salvia bowleyana HOM05D005252 ORTHO05D006788 3.0e-13 77.8 50 66.0
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 3.9e-13 77.4 50 68.0
Cc07_g12720 Coffea canephora HOM05D005252 ORTHO05D006788 6.6e-13 76.6 50 66.0
Migut.K00975 Erythranthe guttata HOM05D005252 ORTHO05D006788 6.6e-13 76.6 50 70.0
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 6.6e-13 76.6 50 62.0
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 8.6e-13 76.3 50 68.0
Atru.chr1.2124 Acer truncatum HOM05D005252 ORTHO05D006788 1.1e-12 75.9 50 68.0
Cfa007750 Carpinus fangiana HOM05D005252 ORTHO05D006788 1.1e-12 75.9 48 66.7
SalBow5G4267 Salvia bowleyana HOM05D005252 ORTHO05D006788 1.1e-12 75.9 50 66.0
Aqoxy3G04163 Aquilegia oxysepala HOM05D005252 ORTHO05D006788 1.5e-12 75.5 50 68.0
CANSAT56G0277 Cannabis sativa HOM05D005252 ORTHO05D006788 1.5e-12 75.5 50 64.0
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 1.5e-12 75.5 50 68.0
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 1.5e-12 75.5 50 64.0
PSO063G5026 Papaver somniferum HOM05D005252 ORTHO05D006788 1.9e-12 75.1 50 66.0
PSO782G3987 Papaver somniferum HOM05D005252 ORTHO05D006788 1.9e-12 75.1 50 66.0
ECA238G3559 Erigeron canadensis HOM05D005252 ORTHO05D006788 2.5e-12 74.7 50 60.0
Haze_14323 Corylus avellana HOM05D005252 ORTHO05D006788 3.3e-12 74.3 48 64.6
Lalb_Chr04g0251511 Lupinus albus HOM05D005252 ORTHO05D006788 5.6e-12 73.6 50 62.0
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 7.3e-12 73.2 50 62.0
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 7.3e-12 73.2 50 62.0
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 9.5e-12 72.8 50 60.0
Hma1.2p1_0158F.1_g069580 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 9.5e-12 72.8 50 60.0
Nn5g27060 Nelumbo nucifera HOM05D005252 ORTHO05D006788 9.5e-12 72.8 50 58.0
TPR.G5289 Trifolium pratense HOM05D005252 ORTHO05D006788 9.5e-12 72.8 50 60.0
arahy.Tifrunner.gnm1.ann1.2Q625H Arachis hypogaea HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 62.0
arahy.Tifrunner.gnm1.ann1.UX6KKC Arachis hypogaea HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 62.0
arahy.Tifrunner.gnm1.ann1.Y82BEI Arachis hypogaea HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 62.0
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 60.0
FAN19G2162 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 60.0
HanXRQChr14g0443361 Helianthus annuus HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 62.0
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 56.0
Medtr5g076640 Medicago truncatula HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 60.0
SHI24494 Sapria himalayana HOM05D005252 ORTHO05D006788 1.2e-11 72.4 50 60.0
CAN.G1681.16 Capsicum annuum HOM05D005252 ORTHO05D006788 1.6e-11 72.0 50 62.0
FAN23G1936 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.6e-11 72.0 49 61.2
TAR622G0830 Trochodendron aralioides HOM05D005252 ORTHO05D006788 1.6e-11 72.0 47 61.7
GSVIVG01035253001 Vitis vinifera HOM05D005252 ORTHO05D006788 1.6e-11 72.0 50 62.0
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 2.8e-11 71.2 50 62.0
Ca_05755_v3 Cicer arietinum L. HOM05D005252 ORTHO05D006788 2.8e-11 71.2 50 62.0
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 2.8e-11 71.2 50 58.0
CiPaw.04G049400 Carya illinoinensis HOM05D005252 ORTHO05D006788 3.6e-11 70.9 50 62.0
Psat2g042800 Pisum sativum HOM05D005252 ORTHO05D006788 3.6e-11 70.9 50 56.0
QL02p064187 Quercus lobata HOM05D005252 ORTHO05D006788 3.6e-11 70.9 50 60.0
Nitab4.5_0009456g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 4.7e-11 70.5 50 60.0
Peaxi162Scf00713g00214 Petunia axillaris HOM05D005252 ORTHO05D006788 4.7e-11 70.5 50 60.0
Sc20g0000830 Simmondsia chinensis HOM05D005252 ORTHO05D006788 4.7e-11 70.5 50 62.0
COL.COLO4_20051 Corchorus olitorius HOM05D005252 ORTHO05D006788 6.2e-11 70.1 50 58.0
Lsat_1_v5_gn_2_71861 Lactuca sativa HOM05D005252 ORTHO05D006788 6.2e-11 70.1 50 56.0
Ah.06g191550 Amaranthus hybridus HOM05D005252 ORTHO05D006788 1.1e-10 69.3 50 58.0
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 1.1e-10 69.3 53 56.6
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 1.1e-10 69.3 50 56.0
LjContig00141g0010829 Lotus japonicus HOM05D005252 ORTHO05D006788 1.1e-10 69.3 50 58.0
Rhsim08G0021900 Rhododendron simsii HOM05D005252 ORTHO05D006788 1.1e-10 69.3 50 60.0
Eucgr.F02912 Eucalyptus grandis HOM05D005252 ORTHO05D006788 1.4e-10 68.9 50 60.0
Nitab4.5_0000483g0240 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.4e-10 68.9 50 58.0
AUR62037491 Chenopodium quinoa HOM05D005252 ORTHO05D006788 1.8e-10 68.6 50 58.0
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 2.3e-10 68.2 50 54.0
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 3.1e-10 67.8 50 58.0
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 3.1e-10 67.8 50 58.0
Nitab4.5_0008137g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 3.1e-10 67.8 50 56.0
Hund22213 Selenicereus undatus HOM05D005252 ORTHO05D006788 3.1e-10 67.8 47 61.7
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 4.0e-10 67.4 50 58.0
Zm00001eb320090 Zea mays HOM05D005252 ORTHO05D006788 4.0e-10 67.4 50 60.0
AUR62004761 Chenopodium quinoa HOM05D005252 ORTHO05D006788 5.2e-10 67.0 50 58.0
Nitab4.5_0011448g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 5.2e-10 67.0 50 56.0
CsaV3_3G021090 Cucumis sativus L. HOM05D005252 ORTHO05D006788 6.8e-10 66.6 50 60.0
Gohir.A12G052400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 6.8e-10 66.6 50 56.0
Gohir.D12G051000 Gossypium hirsutum HOM05D005252 ORTHO05D006788 6.8e-10 66.6 50 56.0
Gorai.008G054300 Gossypium raimondii HOM05D005252 ORTHO05D006788 6.8e-10 66.6 50 56.0
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 8.9e-10 66.2 50 54.0
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 8.9e-10 66.2 50 54.0
VMungo0647G0073 Vigna mungo HOM05D005252 ORTHO05D006788 8.9e-10 66.2 50 52.0
AT5G17240 Arabidopsis thaliana HOM05D005252 ORTHO05D006788 1.2e-09 65.9 50 54.0
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 1.2e-09 65.9 50 52.0
CDE04G0131 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 1.2e-09 65.9 50 54.0
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 1.2e-09 65.9 50 52.0
Glyma.14G209800 Glycine max HOM05D005252 ORTHO05D006788 1.2e-09 65.9 50 54.0
Solyc02g081320.4 Solanum lycopersicum HOM05D005252 ORTHO05D006788 1.2e-09 65.9 50 56.0
Sopen02g025950 Solanum pennellii HOM05D005252 ORTHO05D006788 1.2e-09 65.9 50 56.0
Aa31LG11G12430 Aethionema arabicum HOM05D005252 ORTHO05D006788 1.5e-09 65.5 50 52.0
BcaNung00410 Brassica carinata HOM05D005252 ORTHO05D006788 1.5e-09 65.5 50 52.0
PGR004G2027 Punica granatum HOM05D005252 ORTHO05D006788 1.5e-09 65.5 50 60.0
DCAR_003402 Daucus carota HOM05D005252 ORTHO05D006788 2.0e-09 65.1 50 52.0
DCAR_003403 Daucus carota HOM05D005252 ORTHO05D006788 2.0e-09 65.1 50 52.0
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 2.0e-09 65.1 50 52.0
HPP92_025609 Vanilla planifolia HOM05D005252 ORTHO05D006788 2.0e-09 65.1 50 50.0
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 2.6e-09 64.7 50 50.0
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 2.6e-09 64.7 50 54.0
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 3.4e-09 64.3 50 50.0
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 3.4e-09 64.3 50 50.0
Thecc.04G057900 Theobroma cacao HOM05D005252 ORTHO05D006788 4.4e-09 63.9 50 52.0
Gohir.A07G145950 Gossypium hirsutum HOM05D005252 ORTHO05D006788 5.8e-09 63.5 48 56.2
Sed0007469 Sechium edule HOM05D005252 ORTHO05D006788 5.8e-09 63.5 50 56.0
Os07g0471100 Oryza sativa ssp. japonica HOM05D005252 ORTHO05D006788 7.5e-09 63.2 50 54.0
ATR0807G108 Amborella trichopoda HOM05D005252 ORTHO05D006788 1.3e-08 62.4 48 52.1
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 1.3e-08 62.4 50 50.0
MELO3C020240.2 Cucumis melo HOM05D005252 ORTHO05D006788 1.3e-08 62.4 47 59.6
Mapoly0060s0113 Marchantia polymorpha HOM05D005252 ORTHO05D006788 1.3e-08 62.4 54 48.1
Gohir.A08G081162 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.7e-08 62.0 47 55.3
Gohir.A11G239440 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.7e-08 62.0 47 55.3
Gohir.A13G083166 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.7e-08 62.0 47 55.3
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 2.9e-08 61.2 50 48.0
Gohir.A02G112713 Gossypium hirsutum HOM05D005252 ORTHO05D006788 3.7e-08 60.8 47 55.3
ClCG05G011370 Citrullus lanatus HOM05D005252 ORTHO05D006788 6.4e-08 60.1 55 50.9
Gohir.A01G173232 Gossypium hirsutum HOM05D005252 ORTHO05D006788 6.4e-08 60.1 47 53.2
Gohir.A06G122900 Gossypium hirsutum HOM05D005252 ORTHO05D006788 6.4e-08 60.1 48 52.1
CSS0049209 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.4e-07 58.9 50 54.0
CSS0013830 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 2.4e-07 58.2 44 59.1
Gohir.A01G088400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 5.4e-07 57.0 47 53.2
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.2e-06 55.8 44 54.5
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 7.8e-06 53.1 50 50.0


User provided reference genes

Program Settings