Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024961.1 Olea europaea HOM05D000804 ORTHO05D005389 6.7e-298 1026.5 510 100.0
SalBow4G2892 Salvia bowleyana HOM05D000804 ORTHO05D005389 1.4e-154 550.4 417 66.9
Migut.N01690 Erythranthe guttata HOM05D000804 ORTHO05D005389 7.0e-154 548.1 418 67.0
MSTRG.4983 Avicennia marina HOM05D000804 ORTHO05D005389 5.0e-152 542.0 417 65.2
SGA_v2.0_scaffold4G02207 Striga asiatica HOM05D000804 ORTHO05D005389 1.3e-147 527.3 448 61.2
Dinv43539 Davidia involucrata HOM05D000804 ORTHO05D005389 1.9e-143 513.5 409 63.1
CSS0037336 Camellia sinensis var. sinensis HOM05D000804 ORTHO05D005389 8.3e-139 498.0 420 61.2
Actinidia21598 Actinidia chinensis HOM05D000804 ORTHO05D005389 2.5e-135 486.5 418 59.3
Peaxi162Scf00592g00212 Petunia axillaris HOM05D000804 ORTHO05D005389 6.2e-134 481.9 455 56.0
Solyc01g081050.4 Solanum lycopersicum HOM05D000804 ORTHO05D005389 4.0e-133 479.2 411 59.4
CAN.G700.21 Capsicum annuum HOM05D000804 ORTHO05D005389 4.4e-132 475.7 413 60.0
TAR375G0260 Trochodendron aralioides HOM05D000804 ORTHO05D005389 2.8e-126 456.4 423 57.2
Cc02_g26260 Coffea canephora HOM05D000804 ORTHO05D005389 4.7e-126 455.7 411 57.2
Cfa003676 Carpinus fangiana HOM05D000804 ORTHO05D005389 2.4e-125 453.4 418 55.3
vmacro21110 Vaccinium macrocarpon HOM05D000804 ORTHO05D005389 2.4e-125 453.4 554 48.4
Migut.O00426 Erythranthe guttata HOM05D000804 ORTHO05D005389 3.4e-124 449.5 418 58.6
TWI32G1345 Tripterygium wilfordii HOM05D000804 ORTHO05D005389 1.0e-120 438.0 404 55.4
Duzib128G1116 Durio zibethinus HOM05D000804 ORTHO05D005389 3.3e-119 433.0 408 54.7
Psat4g196240 Pisum sativum HOM05D000804 ORTHO05D005389 3.3e-119 433.0 406 56.2
Lj3g0026096 Lotus japonicus HOM05D000804 ORTHO05D005389 4.3e-119 432.6 410 56.1
Glyma.03G021000 Glycine max HOM05D000804 ORTHO05D005389 7.3e-119 431.8 417 54.9
TPR.G30883 Trifolium pratense HOM05D000804 ORTHO05D005389 1.6e-118 430.6 406 55.2
Haze_15812 Corylus avellana HOM05D000804 ORTHO05D005389 3.6e-118 429.5 419 54.4
GSVIVG01011337001 Vitis vinifera HOM05D000804 ORTHO05D005389 3.6e-118 429.5 427 52.9
Lalb_Chr07g0189561 Lupinus albus HOM05D000804 ORTHO05D005389 1.4e-117 427.6 406 54.9
Gohir.D13G099900 Gossypium hirsutum HOM05D000804 ORTHO05D005389 1.8e-117 427.2 417 52.5
Gorai.013G111900 Gossypium raimondii HOM05D000804 ORTHO05D005389 1.8e-117 427.2 417 52.5
VMungo0331G0574 Vigna mungo HOM05D000804 ORTHO05D005389 1.8e-117 427.2 407 54.8
Nn1g09657 Nelumbo nucifera HOM05D000804 ORTHO05D005389 5.3e-117 425.6 414 52.7
Gohir.A13G075600 Gossypium hirsutum HOM05D000804 ORTHO05D005389 6.9e-117 425.2 417 52.0
QL04p052206 Quercus lobata HOM05D000804 ORTHO05D005389 3.8e-115 419.5 407 53.1
Ca_23827_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 4.9e-115 419.1 411 54.0
arahy.Tifrunner.gnm1.ann1.00QVML Arachis hypogaea HOM05D000804 ORTHO05D005389 1.1e-114 417.9 411 53.0
arahy.Tifrunner.gnm1.ann1.A8SNFY Arachis hypogaea HOM05D000804 ORTHO05D005389 5.4e-114 415.6 420 52.4
DCAR_029554 Daucus carota HOM05D000804 ORTHO05D005389 7.1e-114 415.2 404 54.2
Potri.019G043800 Populus trichocarpa HOM05D000804 ORTHO05D005389 2.1e-113 413.7 406 53.2
Atru.chr2.1715 Acer truncatum HOM05D000804 ORTHO05D005389 4.6e-113 412.5 413 52.5
Aqoxy3G02136 Aquilegia oxysepala HOM05D000804 ORTHO05D005389 7.9e-113 411.8 402 52.7
Manes.09G131500 Manihot esculenta HOM05D000804 ORTHO05D005389 3.0e-112 409.8 417 53.0
Medtr8g035620 Medicago truncatula HOM05D000804 ORTHO05D005389 1.5e-111 407.5 406 52.5
THA.LOC104825451 Tarenaya hassleriana HOM05D000804 ORTHO05D005389 1.5e-111 407.5 411 51.8
Nitab4.5_0003594g0030 Nicotiana tabacum HOM05D000804 ORTHO05D005389 2.5e-111 406.8 361 58.2
Ciclev10030562m.g Citrus clementina HOM05D000804 ORTHO05D005389 7.4e-111 405.2 415 51.6
PGR083G1621 Punica granatum HOM05D000804 ORTHO05D005389 9.6e-111 404.8 430 50.5
Sabra19G0054400 Salix brachista HOM05D000804 ORTHO05D005389 4.0e-109 399.4 409 51.1
EL10Ac5g10540 Beta vulgaris HOM05D000804 ORTHO05D005389 6.9e-109 398.7 431 47.6
HanXRQChr01g0020521 Helianthus annuus HOM05D000804 ORTHO05D005389 2.2e-107 393.7 411 52.6
Ca_23822_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 1.8e-104 384.0 411 51.1
Hma1.2p1_0684F.1_g202990 Hydrangea macrophylla HOM05D000804 ORTHO05D005389 6.7e-104 382.1 315 61.3
Eucgr.D01046 Eucalyptus grandis HOM05D000804 ORTHO05D005389 1.9e-103 380.6 404 49.5
ClCG06G008140 Citrullus lanatus HOM05D000804 ORTHO05D005389 2.8e-102 376.7 409 50.4
PSO063G5197 Papaver somniferum HOM05D000804 ORTHO05D005389 4.8e-102 375.9 442 47.1
Sed0024810 Sechium edule HOM05D000804 ORTHO05D005389 6.2e-102 375.6 409 48.7
AUR62028598 Chenopodium quinoa HOM05D000804 ORTHO05D005389 8.2e-102 375.2 407 48.2
MELO3C020372.2 Cucumis melo HOM05D000804 ORTHO05D005389 2.6e-100 370.2 436 47.2
Lj7C558T5 Lonicera japonica HOM05D000804 ORTHO05D005389 5.8e-100 369.0 259 69.1
CsaV3_2G011020 Cucumis sativus L. HOM05D000804 ORTHO05D005389 4.9e-99 365.9 436 46.3
Thhalv10003545m.g Eutrema salsugineum HOM05D000804 ORTHO05D005389 6.5e-99 365.5 406 47.5
BcaC07g37646 Brassica carinata HOM05D000804 ORTHO05D005389 8.4e-99 365.2 409 47.7
Sp7g06220 Schrenkiella parvula HOM05D000804 ORTHO05D005389 1.1e-98 364.8 412 47.3
Aa31LG9G17950 Aethionema arabicum HOM05D000804 ORTHO05D005389 3.5e-97 359.8 412 46.6
Nitab4.5_0000592g0230 Nicotiana tabacum HOM05D000804 ORTHO05D005389 7.9e-97 358.6 269 67.3
ATR0829G026 Amborella trichopoda HOM05D000804 ORTHO05D005389 1.9e-95 354.0 435 44.1
Sc17g0001320 Simmondsia chinensis HOM05D000804 ORTHO05D005389 1.9e-95 354.0 412 45.9
Carub.0007s3171 Capsella rubella HOM05D000804 ORTHO05D005389 3.7e-94 349.7 404 46.0
Cpa.g.sc73.84 Carica papaya HOM05D000804 ORTHO05D005389 4.8e-94 349.4 267 64.0
AL7G44840 Arabidopsis lyrata HOM05D000804 ORTHO05D005389 1.4e-93 347.8 413 46.0
AT5G35930 Arabidopsis thaliana HOM05D000804 ORTHO05D005389 1.4e-93 347.8 414 45.4
BcaC07g37648 Brassica carinata HOM05D000804 ORTHO05D005389 1.4e-93 347.8 410 46.3
BolC8t48020H Brassica oleracea HOM05D000804 ORTHO05D005389 3.1e-93 346.7 412 46.6
Phvul.010G085900 Phaseolus vulgaris HOM05D000804 ORTHO05D005389 5.3e-93 345.9 268 62.3
BraA08t32948Z Brassica rapa HOM05D000804 ORTHO05D005389 1.0e-91 341.7 408 46.6
A08p09490 Brassica napus HOM05D000804 ORTHO05D005389 2.2e-91 340.5 408 46.1
FAN06G2879 Fragaria x ananassa HOM05D000804 ORTHO05D005389 2.2e-91 340.5 403 48.6
Ah.02g110870 Amaranthus hybridus HOM05D000804 ORTHO05D005389 2.9e-91 340.1 406 44.8
CARHR216700 Cardamine hirsuta HOM05D000804 ORTHO05D005389 6.5e-91 339.0 415 43.6
Lsat_1_v5_gn_1_84561 Lactuca sativa HOM05D000804 ORTHO05D005389 6.5e-91 339.0 339 51.9
CiPaw.01G087500 Carya illinoinensis HOM05D000804 ORTHO05D005389 8.5e-91 338.6 350 51.7
FAN10G1244 Fragaria x ananassa HOM05D000804 ORTHO05D005389 8.5e-91 338.6 403 48.1
HPP92_005377 Vanilla planifolia HOM05D000804 ORTHO05D005389 8.5e-91 338.6 421 44.2
MD07G1077300 Malus domestica HOM05D000804 ORTHO05D005389 5.5e-90 335.9 434 44.9
FAN01G2963 Fragaria x ananassa HOM05D000804 ORTHO05D005389 7.9e-89 332.0 403 47.9
Prupe.2G098200 Prunus persica HOM05D000804 ORTHO05D005389 1.8e-88 330.9 416 45.7
unitig_22.g5901 Utricularia gibba HOM05D000804 ORTHO05D005389 3.3e-87 326.6 365 50.4
AUR62017553 Chenopodium quinoa HOM05D000804 ORTHO05D005389 1.4e-82 311.2 260 58.1
RcHm_v2.0_Chr1g0337111 Rosa chinensis HOM05D000804 ORTHO05D005389 1.3e-78 298.1 402 44.3
ECA248G3066 Erigeron canadensis HOM05D000804 ORTHO05D005389 1.7e-75 287.7 420 43.1
Rhsim01G0135000 Rhododendron simsii HOM05D000804 ORTHO05D005389 4.5e-68 263.1 288 49.3
Zm00001eb378990 Zea mays HOM05D000804 ORTHO05D005389 2.8e-62 243.8 414 36.2
RcHm_v2.0_Chr1g0337141 Rosa chinensis HOM05D000804 ORTHO05D005389 1.7e-59 234.6 161 71.4
Os06g0111600 Oryza sativa ssp. japonica HOM05D000804 ORTHO05D005389 1.1e-58 231.9 266 46.6
arahy.Tifrunner.gnm1.ann1.WIDJ0V Arachis hypogaea HOM05D000804 ORTHO05D005389 2.1e-57 227.6 318 40.9
CDE12G0088 Ceratophyllum demersum HOM05D000804 ORTHO05D005389 1.4e-56 224.9 303 40.9
RcHm_v2.0_Chr2g0102891 Rosa chinensis HOM05D000804 ORTHO05D005389 1.2e-52 211.8 191 53.9
SMO145G0113 Selaginella moellendorffii HOM05D000804 ORTHO05D005389 7.7e-52 209.1 256 44.9
AagrBONN_evm.TU.Sc2ySwM_117.1272 Anthoceros agrestis HOM05D000804 ORTHO05D005389 1.3e-51 208.4 411 33.6
Rhsim01G0134900 Rhododendron simsii HOM05D000804 ORTHO05D005389 1.1e-50 205.3 138 73.2
SEGI_25496 Sequoiadendron giganteum HOM05D000804 ORTHO05D005389 1.9e-50 204.5 202 47.5
HPP92_005437 Vanilla planifolia HOM05D000804 ORTHO05D005389 3.6e-49 200.3 292 39.4
HPP92_005379 Vanilla planifolia HOM05D000804 ORTHO05D005389 1.3e-46 191.8 283 39.2
Thecc.05G230500 Theobroma cacao HOM05D000804 ORTHO05D005389 5.8e-39 166.4 126 62.7
CBR_g4474 Chara braunii HOM05D000804 ORTHO05D005389 1.9e-34 151.4 161 52.2
BcaB04g18017 Brassica carinata HOM05D000804 ORTHO05D005389 3.1e-32 144.1 277 33.2
HPP92_005439 Vanilla planifolia HOM05D000804 ORTHO05D005389 1.2e-25 122.1 116 55.2
Nitab4.5_0000592g0240 Nicotiana tabacum HOM05D000804 ORTHO05D005389 3.2e-21 107.5 111 53.2
Pp3c10_8470 Physcomitrium patens HOM05D000804 ORTHO05D005389 1.3e-19 102.1 126 46.0
Nitab4.5_0003594g0020 Nicotiana tabacum HOM05D000804 ORTHO05D005389 1.9e-18 98.2 67 74.6
Cre12.g529301 Chlamydomonas reinhardtii HOM05D000804 ORTHO05D005389 6.8e-16 89.7 421 23.5
Cpa.g.sc73.83 Carica papaya HOM05D000804 ORTHO05D005389 2.9e-14 84.3 104 45.2
HPP92_005380 Vanilla planifolia HOM05D000804 ORTHO05D005389 3.2e-13 80.9 54 61.1
SEGI_17549 Sequoiadendron giganteum HOM05D000804 ORTHO05D005389 2.3e-11 74.7 65 55.4
MCO03G569 Micromonas commoda HOM05D000804 ORTHO05D005389 4.8e-09 67.0 370 25.1
EL10Ac1g01132 Beta vulgaris HOM05D000169 ORTHO05D007693 2.4e-08 64.7 297 21.2
MCO11G373 Micromonas commoda HOM05D000804 ORTHO05D005389 3.1e-08 64.3 337 24.9
Mapoly0066s0079 Marchantia polymorpha HOM05D000804 ORTHO05D005389 6.9e-08 63.2 305 24.3
TWI75G0003 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 2.6e-07 61.2 298 23.5
MD09G1208800 Malus domestica HOM05D000169 ORTHO05D004780 3.4e-07 60.8 196 24.0
TWI12G1479 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 4.4e-07 60.5 214 25.7
HPP92_024579 Vanilla planifolia HOM05D000169 ORTHO05D004780 4.4e-07 60.5 168 26.8
HanXRQChr16g0500801 Helianthus annuus HOM05D000169 ORTHO05D004780 5.8e-07 60.1 287 23.7
MCO05G727 Micromonas commoda HOM05D000804 ORTHO05D005389 7.6e-07 59.7 225 22.7
Thecc.06G002500 Theobroma cacao HOM05D000169 ORTHO05D007693 7.6e-07 59.7 184 22.8
Aa31LG8G3300 Aethionema arabicum HOM05D000169 ORTHO05D004780 9.9e-07 59.3 173 26.6
Oeu000461.2 Olea europaea HOM05D000169 ORTHO05D004780 9.9e-07 59.3 171 26.9
Peaxi162Scf00034g00413 Petunia axillaris HOM05D000169 ORTHO05D004780 1.7e-06 58.5 165 24.8
Atru.chr1.3409_Atru.chr1.3410 Acer truncatum HOM05D000169 ORTHO05D004780 2.9e-06 57.8 199 25.6
CiPaw.02G148300 Carya illinoinensis HOM05D000169 ORTHO05D004780 2.9e-06 57.8 185 25.4
MD17G1190300 Malus domestica HOM05D000169 ORTHO05D004780 3.8e-06 57.4 260 22.7
Sc15g0002130 Simmondsia chinensis HOM05D000169 ORTHO05D004780 3.8e-06 57.4 174 25.9
Sabra03G0137800 Salix brachista HOM05D000169 ORTHO05D001214 4.9e-06 57.0 280 23.9
AT3G16170 Arabidopsis thaliana HOM05D000169 ORTHO05D004780 6.4e-06 56.6 187 25.1
Cfa013516 Carpinus fangiana HOM05D000169 ORTHO05D001214 8.4e-06 56.2 300 23.7
Ciclev10025185m.g Citrus clementina HOM05D000169 ORTHO05D004780 8.4e-06 56.2 278 21.9


User provided reference genes

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