Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024936.1 Olea europaea HOM05D003563 ORTHO05D005325 1.2e-38 162.5 76 100.0
Oeu049958.2 Olea europaea HOM05D003563 ORTHO05D005325 1.1e-15 86.3 51 82.4
Cpa.g.sc36.68 Carica papaya HOM05D003563 ORTHO05D005325 7.3e-15 83.6 68 64.7
MSTRG.1282 Avicennia marina HOM05D003563 ORTHO05D005325 1.2e-14 82.8 68 63.2
Nitab4.5_0000194g0210 Nicotiana tabacum HOM05D003563 ORTHO05D005325 1.2e-14 82.8 51 76.5
Nitab4.5_0009269g0010 Nicotiana tabacum HOM05D003563 ORTHO05D005325 1.2e-14 82.8 51 76.5
Lj4A41G56 Lonicera japonica HOM05D003563 ORTHO05D005325 2.1e-14 82.0 68 64.7
MSTRG.25165 Avicennia marina HOM05D003563 ORTHO05D005325 2.8e-14 81.6 68 63.2
Eucgr.F01561 Eucalyptus grandis HOM05D003563 ORTHO05D005325 2.8e-14 81.6 70 60.0
Ah.02g117430 Amaranthus hybridus HOM05D003563 ORTHO05D005325 3.6e-14 81.3 51 74.5
Migut.C00716 Erythranthe guttata HOM05D003563 ORTHO05D005325 3.6e-14 81.3 68 61.8
Lalb_Chr23g0266621 Lupinus albus HOM05D003563 ORTHO05D005325 4.7e-14 80.9 70 57.1
SalBow7G2312 Salvia bowleyana HOM05D003563 ORTHO05D005325 4.7e-14 80.9 68 63.2
Hund14325 Selenicereus undatus HOM05D003563 ORTHO05D005325 4.7e-14 80.9 51 74.5
SGA_v2.0_scaffold54G19524 Striga asiatica HOM05D003563 ORTHO05D005325 4.7e-14 80.9 68 60.3
Gohir.A01G116000 Gossypium hirsutum HOM05D003563 ORTHO05D005325 6.2e-14 80.5 68 61.8
Gohir.D01G104300 Gossypium hirsutum HOM05D003563 ORTHO05D005325 6.2e-14 80.5 68 61.8
Gorai.002G128400 Gossypium raimondii HOM05D003563 ORTHO05D005325 6.2e-14 80.5 68 61.8
Cc10_g02960 Coffea canephora HOM05D003563 ORTHO05D005325 1.4e-13 79.3 68 61.8
MD15G1031400 Malus domestica HOM05D003563 ORTHO05D005325 1.4e-13 79.3 65 63.1
Solyc12g014380.3 Solanum lycopersicum HOM05D003563 ORTHO05D005325 1.4e-13 79.3 51 70.6
Sopen12g006150 Solanum pennellii HOM05D003563 ORTHO05D005325 1.4e-13 79.3 51 70.6
vmacro21635 Vaccinium macrocarpon HOM05D003563 ORTHO05D005325 1.4e-13 79.3 68 61.8
Ciclev10000722m.g Citrus clementina HOM05D003563 ORTHO05D005325 1.8e-13 79.0 51 66.7
Duzib093G1625 Durio zibethinus HOM05D003563 ORTHO05D005325 1.8e-13 79.0 66 63.6
QL02p008438 Quercus lobata HOM05D003563 ORTHO05D005325 1.8e-13 79.0 68 58.8
TWI56G0595 Tripterygium wilfordii HOM05D003563 ORTHO05D005325 1.8e-13 79.0 68 60.3
ECA232G1124 Erigeron canadensis HOM05D003563 ORTHO05D005325 2.4e-13 78.6 68 58.8
Peaxi162Scf00333g00512 Petunia axillaris HOM05D003563 ORTHO05D005325 2.4e-13 78.6 51 70.6
Prupe.1G380500 Prunus persica HOM05D003563 ORTHO05D005325 2.4e-13 78.6 68 58.8
Potri.008G118900 Populus trichocarpa HOM05D003563 ORTHO05D005325 3.1e-13 78.2 68 58.8
Sabra08G0090300 Salix brachista HOM05D003563 ORTHO05D005325 3.1e-13 78.2 68 58.8
Dinv39412 Davidia involucrata HOM05D003563 ORTHO05D005325 4.0e-13 77.8 51 72.5
MD08G1034600 Malus domestica HOM05D003563 ORTHO05D005325 4.0e-13 77.8 65 61.5
arahy.Tifrunner.gnm1.ann1.7JQX15 Arachis hypogaea HOM05D003563 ORTHO05D005325 5.2e-13 77.4 68 58.8
arahy.Tifrunner.gnm1.ann1.UW0ZL7 Arachis hypogaea HOM05D003563 ORTHO05D005325 5.2e-13 77.4 68 58.8
Phvul.004G023500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 5.2e-13 77.4 68 57.4
Rhsim06G0034400 Rhododendron simsii HOM05D003563 ORTHO05D005325 5.2e-13 77.4 68 60.3
Aa31LG9G12790 Aethionema arabicum HOM05D003563 ORTHO05D005325 6.8e-13 77.0 68 60.3
CSS0002435 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D005325 6.8e-13 77.0 68 60.3
PSO675G8753 Papaver somniferum HOM05D003563 ORTHO05D005325 6.8e-13 77.0 68 57.4
Psat1g077120 Pisum sativum HOM05D003563 ORTHO05D005325 6.8e-13 77.0 68 58.8
RcHm_v2.0_Chr6g0300881 Rosa chinensis HOM05D003563 ORTHO05D005325 6.8e-13 77.0 68 55.9
BcaB07g31058 Brassica carinata HOM05D003563 ORTHO05D005325 8.9e-13 76.6 65 61.5
C09p25230 Brassica napus HOM05D003563 ORTHO05D005325 8.9e-13 76.6 65 61.5
BraA09t37600Z Brassica rapa HOM05D003563 ORTHO05D005325 8.9e-13 76.6 65 61.5
AUR62027308 Chenopodium quinoa HOM05D003563 ORTHO05D005325 8.9e-13 76.6 51 68.6
FAN20G1254 Fragaria x ananassa HOM05D003563 ORTHO05D005325 8.9e-13 76.6 66 51.5
HanXRQChr09g0268611 Helianthus annuus HOM05D003563 ORTHO05D005325 8.9e-13 76.6 68 55.9
Lj7C352G3 Lonicera japonica HOM05D003563 ORTHO05D005325 8.9e-13 76.6 51 72.5
Sc02g0006230 Simmondsia chinensis HOM05D003563 ORTHO05D005325 8.9e-13 76.6 68 61.8
CiPaw.15G077500 Carya illinoinensis HOM05D003563 ORTHO05D005325 1.2e-12 76.3 51 68.6
FvH4_2g39910 Fragaria vesca HOM05D003563 ORTHO05D005325 1.2e-12 76.3 68 55.9
FAN15G3737 Fragaria x ananassa HOM05D003563 ORTHO05D005325 1.2e-12 76.3 68 55.9
FAN27G1814 Fragaria x ananassa HOM05D003563 ORTHO05D005325 1.2e-12 76.3 68 55.9
MBI16_g36556_MAGBIO Magnolia biondii HOM05D003563 ORTHO05D005325 1.2e-12 76.3 67 52.2
VMungo0464G1044 Vigna mungo HOM05D003563 ORTHO05D005325 1.2e-12 76.3 68 55.9
BcaC04g21978 Brassica carinata HOM05D003563 ORTHO05D005325 1.5e-12 75.9 65 61.5
BolC9t55419H Brassica oleracea HOM05D003563 ORTHO05D005325 1.5e-12 75.9 65 61.5
ClCG08G015170 Citrullus lanatus HOM05D003563 ORTHO05D005325 1.5e-12 75.9 63 61.9
MELO3C010936.2 Cucumis melo HOM05D003563 ORTHO05D005325 1.5e-12 75.9 63 61.9
CsaV3_2G028640 Cucumis sativus L. HOM05D003563 ORTHO05D005325 1.5e-12 75.9 63 61.9
Glyma.19G017200 Glycine max HOM05D003563 ORTHO05D005325 1.5e-12 75.9 68 57.4
Thecc.08G025500 Theobroma cacao HOM05D003563 ORTHO05D005325 1.5e-12 75.9 66 62.1
A09p19900 Brassica napus HOM05D003563 ORTHO05D005325 2.0e-12 75.5 65 60.0
Cfa018145 Carpinus fangiana HOM05D003563 ORTHO05D005325 2.0e-12 75.5 68 57.4
Glyma.04G032600 Glycine max HOM05D003563 ORTHO05D005325 2.0e-12 75.5 68 54.4
Lsat_1_v5_gn_4_119160 Lactuca sativa HOM05D003563 ORTHO05D005325 2.0e-12 75.5 68 57.4
Manes.05G160800 Manihot esculenta HOM05D003563 ORTHO05D005325 2.0e-12 75.5 68 58.8
Medtr6g009330 Medicago truncatula HOM05D003563 ORTHO05D005325 2.0e-12 75.5 51 68.6
HPP92_002698 Vanilla planifolia HOM05D003563 ORTHO05D005325 2.0e-12 75.5 68 57.4
AUR62007425 Chenopodium quinoa HOM05D003563 ORTHO05D005325 2.6e-12 75.1 51 66.7
Haze_07269 Corylus avellana HOM05D003563 ORTHO05D005325 2.6e-12 75.1 68 55.9
DCAR_020972 Daucus carota HOM05D003563 ORTHO05D005325 2.6e-12 75.1 68 57.4
Phvul.009G057500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 2.6e-12 75.1 68 55.9
GSVIVG01009697001 Vitis vinifera HOM05D003563 ORTHO05D005325 2.6e-12 75.1 68 57.4
COL.COLO4_26329 Corchorus olitorius HOM05D003563 ORTHO05D005325 3.4e-12 74.7 49 73.5
Dinv36074 Davidia involucrata HOM05D003563 ORTHO05D005325 3.4e-12 74.7 65 58.5
Lj1g0022254 Lotus japonicus HOM05D003563 ORTHO05D005325 3.4e-12 74.7 68 54.4
Sp2g07360 Schrenkiella parvula HOM05D003563 ORTHO05D005325 3.4e-12 74.7 65 58.5
Sed0015721 Sechium edule HOM05D003563 ORTHO05D005325 3.4e-12 74.7 61 57.4
Carub.0008s0621 Capsella rubella HOM05D003563 ORTHO05D005325 4.4e-12 74.3 65 56.9
CDE05G1619 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 4.4e-12 74.3 66 57.6
CANSAT21G1125 Cannabis sativa HOM05D003563 ORTHO05D005325 5.8e-12 73.9 68 55.9
Ca_04241_v3 Cicer arietinum L. HOM05D003563 ORTHO05D005325 5.8e-12 73.9 68 58.8
Nn1g05025 Nelumbo nucifera HOM05D003563 ORTHO05D005325 5.8e-12 73.9 66 57.6
Nn5g29576 Nelumbo nucifera HOM05D003563 ORTHO05D005325 5.8e-12 73.9 66 59.1
THA.LOC104798643 Tarenaya hassleriana HOM05D003563 ORTHO05D005325 5.8e-12 73.9 67 55.2
TPR.G32590 Trifolium pratense HOM05D003563 ORTHO05D005325 5.8e-12 73.9 68 57.4
TAR381G1659 Trochodendron aralioides HOM05D003563 ORTHO05D005325 5.8e-12 73.9 64 59.4
EL10Ac5g11903 Beta vulgaris HOM05D003563 ORTHO05D005325 7.6e-12 73.6 51 66.7
CAN.G233.10 Capsicum annuum HOM05D003563 ORTHO05D005325 7.6e-12 73.6 51 68.6
PGR083G2760 Punica granatum HOM05D003563 ORTHO05D005325 9.9e-12 73.2 72 56.9
Sed0018414 Sechium edule HOM05D003563 ORTHO05D005325 9.9e-12 73.2 63 58.7
VMungo1309G1719 Vigna mungo HOM05D003563 ORTHO05D005325 9.9e-12 73.2 68 54.4
AT5G42740 Arabidopsis thaliana HOM05D003563 ORTHO05D005325 1.3e-11 72.8 65 58.5
CARHR181650 Cardamine hirsuta HOM05D003563 ORTHO05D005325 1.3e-11 72.8 65 56.9
unitig_37.g12990 Utricularia gibba HOM05D003563 ORTHO05D005325 1.7e-11 72.4 68 58.8
ATR0057G040 Amborella trichopoda HOM05D003563 ORTHO05D005325 2.2e-11 72.0 68 54.4
Manes.18G027800 Manihot esculenta HOM05D003563 ORTHO05D005325 2.2e-11 72.0 68 54.4
Pp3c25_1860 Physcomitrium patens HOM05D003563 ORTHO05D005325 2.2e-11 72.0 48 72.9
SEGI_25229 Sequoiadendron giganteum HOM05D003563 ORTHO05D005325 2.2e-11 72.0 68 57.4
SHI08159 Sapria himalayana HOM05D003563 ORTHO05D005325 6.4e-11 70.5 51 64.7
PSO541G4717 Papaver somniferum HOM05D003563 ORTHO05D005325 8.4e-11 70.1 68 54.4
SMO119G0154 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 8.4e-11 70.1 45 71.1
Aqoxy6G01090 Aquilegia oxysepala HOM05D003563 ORTHO05D005325 1.1e-10 69.7 68 51.5
AagrBONN_evm.TU.Sc2ySwM_228.405 Anthoceros agrestis HOM05D003563 ORTHO05D005325 1.4e-10 69.3 51 64.7
Pp3c16_6380 Physcomitrium patens HOM05D003563 ORTHO05D005325 1.4e-10 69.3 65 50.8
QL05p059246 Quercus lobata HOM05D003563 ORTHO05D005325 1.9e-10 68.9 44 68.2
Zm00001eb059230 Zea mays HOM05D003563 ORTHO05D005325 2.4e-10 68.6 68 51.5
Thhalv10003173m.g Eutrema salsugineum HOM05D003563 ORTHO05D005325 3.2e-10 68.2 63 57.1
MCO02G104 Micromonas commoda HOM05D003563 ORTHO05D005325 4.1e-10 67.8 51 62.7
SMO340G0102 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 5.4e-10 67.4 48 64.6
Os03g0776000 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 9.2e-10 66.6 68 50.0
Os06g0256500 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 1.2e-09 66.2 68 50.0
Cre03.g175400 Chlamydomonas reinhardtii HOM05D003563 ORTHO05D005325 2.1e-09 65.5 48 62.5
Mapoly0034s0044 Marchantia polymorpha HOM05D003563 ORTHO05D005325 3.5e-09 64.7 51 60.8
AagrBONN_evm.TU.Sc2ySwM_344.3288 Anthoceros agrestis HOM05D003563 ORTHO05D005325 6.0e-09 63.9 51 58.8
CBR_g3932 Chara braunii HOM05D003563 ORTHO05D005325 6.0e-09 63.9 48 66.7
CBR_g52178 Chara braunii HOM05D003563 ORTHO05D005325 1.0e-08 63.2 48 66.7
PRCOL_00005031 Prasinoderma coloniale HOM05D003563 ORTHO05D005325 3.0e-08 61.6 48 64.6
Pp3c5_3820 Physcomitrium patens HOM05D003563 ORTHO05D005325 6.6e-08 60.5 48 62.5
AagrBONN_evm.TU.Sc2ySwM_368.1410 Anthoceros agrestis HOM05D003563 ORTHO05D005325 1.5e-07 59.3 51 54.9


User provided reference genes

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