Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024905.1 Olea europaea HOM05D000467 ORTHO05D287790 1.8e-17 91.7 50 100.0
SalBow3G0334 Salvia bowleyana HOM05D000467 ORTHO05D000379 1.7e-12 75.1 50 84.0
SGA_v2.0_scaffold80G25883 Striga asiatica HOM05D000467 ORTHO05D000379 2.5e-11 71.2 53 81.1
Peaxi162Scf00071g00541 Petunia axillaris HOM05D000467 ORTHO05D000379 5.5e-11 70.1 53 79.2
Nitab4.5_0014776g0010 Nicotiana tabacum HOM05D000467 ORTHO05D000379 1.2e-10 68.9 53 79.2
Cc02_g34530 Coffea canephora HOM05D000467 ORTHO05D000379 2.7e-10 67.8 53 79.2
Sopen01g043580 Solanum pennellii HOM05D000467 ORTHO05D000379 4.7e-10 67.0 53 75.5
MSTRG.27963 Avicennia marina HOM05D000467 ORTHO05D000379 1.0e-09 65.9 53 75.5
Nitab4.5_0001266g0020 Nicotiana tabacum HOM05D000467 ORTHO05D000379 1.0e-09 65.9 53 75.5
Nitab4.5_0002612g0050 Nicotiana tabacum HOM05D000467 ORTHO05D000379 1.0e-09 65.9 54 79.6
Glyma.19G230500 Glycine max HOM05D000467 ORTHO05D000379 1.4e-09 65.5 53 71.7
Peaxi162Scf00037g01815 Petunia axillaris HOM05D000467 ORTHO05D000379 1.4e-09 65.5 53 73.6
Nitab4.5_0000005g0570 Nicotiana tabacum HOM05D000467 ORTHO05D000379 2.3e-09 64.7 53 75.5
arahy.Tifrunner.gnm1.ann1.6CJL2B Arachis hypogaea HOM05D000467 ORTHO05D000379 3.0e-09 64.3 53 69.8
arahy.Tifrunner.gnm1.ann1.88CVAX Arachis hypogaea HOM05D000467 ORTHO05D000379 3.0e-09 64.3 53 69.8
Glyma.03G233400 Glycine max HOM05D000467 ORTHO05D000379 3.9e-09 63.9 53 71.7
Oeu012136.2 Olea europaea HOM05D000467 ORTHO05D000379 6.7e-09 63.2 52 75.0
MSTRG.5126 Avicennia marina HOM05D000467 ORTHO05D000379 8.8e-09 62.8 53 71.7
Phvul.007G198900 Phaseolus vulgaris HOM05D000467 ORTHO05D000379 8.8e-09 62.8 53 67.9
VMungo0720G1548 Vigna mungo HOM05D000467 ORTHO05D000379 8.8e-09 62.8 53 67.9
Solyc01g100050.3 Solanum lycopersicum HOM05D000467 ORTHO05D000379 1.1e-08 62.4 54 74.1
PGSC0003DMG400024727 Solanum tuberosum HOM05D000467 ORTHO05D000379 1.1e-08 62.4 54 74.1
CSS0007939 Camellia sinensis var. sinensis HOM05D000467 ORTHO05D000379 1.5e-08 62.0 54 72.2
CSS0008815 Camellia sinensis var. sinensis HOM05D000467 ORTHO05D000379 1.5e-08 62.0 54 72.2
Medtr1g083700 Medicago truncatula HOM05D000467 ORTHO05D000379 3.3e-08 60.8 53 66.0
Psat6g151680 Pisum sativum HOM05D000467 ORTHO05D000379 3.3e-08 60.8 53 67.9
VMungo1383G1268 Vigna mungo HOM05D000467 ORTHO05D000379 3.3e-08 60.8 52 67.3
Glyma.10G150000 Glycine max HOM05D000467 ORTHO05D000379 4.4e-08 60.5 53 66.0
Glyma.20G238400 Glycine max HOM05D000467 ORTHO05D000379 4.4e-08 60.5 53 66.0
Ca_10153_v3 Cicer arietinum L. HOM05D000467 ORTHO05D000379 1.3e-07 58.9 53 64.2
Lalb_Chr15g0077541 Lupinus albus HOM05D000467 ORTHO05D000379 1.3e-07 58.9 53 67.9
Manes.09G174100 Manihot esculenta HOM05D000467 ORTHO05D000379 2.2e-07 58.2 54 68.5
Psat7g034080 Pisum sativum HOM05D000467 ORTHO05D000379 2.2e-07 58.2 53 66.0
Ca_09331_v3 Cicer arietinum L. HOM05D000467 ORTHO05D000379 3.7e-07 57.4 53 64.2
Potri.005G021700 Populus trichocarpa HOM05D000467 ORTHO05D000379 3.7e-07 57.4 54 68.5
Medtr7g112460 Medicago truncatula HOM05D000467 ORTHO05D000379 4.8e-07 57.0 53 66.0
Dinv24407 Davidia involucrata HOM05D000467 ORTHO05D000379 8.2e-07 56.2 54 70.4
Manes.08G114500 Manihot esculenta HOM05D000467 ORTHO05D000379 1.1e-06 55.8 54 66.7
Sabra05G0027600 Salix brachista HOM05D000467 ORTHO05D000379 1.4e-06 55.5 54 66.7
Lj5g0011137 Lotus japonicus HOM05D000467 ORTHO05D000379 1.8e-06 55.1 53 64.2
Potri.013G012100 Populus trichocarpa HOM05D000467 ORTHO05D000379 2.4e-06 54.7 54 64.8
unitig_26.g9477 Utricularia gibba HOM05D000467 ORTHO05D000379 2.4e-06 54.7 53 64.2
Gohir.D08G224300 Gossypium hirsutum HOM05D000467 ORTHO05D000379 3.1e-06 54.3 53 62.3
Lalb_Chr04g0260561 Lupinus albus HOM05D000467 ORTHO05D000379 3.1e-06 54.3 53 64.2
Rhsim11G0092100 Rhododendron simsii HOM05D000467 ORTHO05D000379 4.1e-06 53.9 52 69.2
TPR.G1654 Trifolium pratense HOM05D000467 ORTHO05D000379 5.3e-06 53.5 53 62.3
Gohir.A08G207700 Gossypium hirsutum HOM05D000467 ORTHO05D000379 7.0e-06 53.1 53 60.4
Gorai.004G238300 Gossypium raimondii HOM05D000467 ORTHO05D000379 7.0e-06 53.1 53 60.4
Phvul.001G227000 Phaseolus vulgaris HOM05D000467 ORTHO05D000379 9.1e-06 52.8 53 64.2
QL03p018959 Quercus lobata HOM05D000467 ORTHO05D000379 9.1e-06 52.8 54 61.1


User provided reference genes

Program Settings