Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024903.1 Olea europaea HOM05D004960 ORTHO05D004696 1.8e-163 579.3 314 100.0
Migut.J01407 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.3e-70 270.8 318 50.6
SGA_v2.0_scaffold69G23316 Striga asiatica HOM05D004960 ORTHO05D004696 1.9e-61 240.4 303 48.5
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 1.3e-60 237.7 315 45.7
Oeu043380.1 Olea europaea HOM05D004960 ORTHO05D004696 2.4e-48 196.8 328 41.2
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 2.7e-47 193.4 314 39.2
Oeu037992.1 Olea europaea HOM05D004960 ORTHO05D004696 1.8e-46 190.7 322 39.1
Cc06_g13860 Coffea canephora HOM05D004960 ORTHO05D004696 5.1e-46 189.1 314 38.5
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 3.3e-45 186.4 317 38.8
PGSC0003DMG400034810 Solanum tuberosum HOM05D004960 ORTHO05D004696 7.4e-45 185.3 257 44.0
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 1.0e-41 174.9 265 42.6
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 1.7e-41 174.1 307 38.1
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.2e-39 167.9 301 36.5
Ciclev10008947m.g Citrus clementina HOM05D004960 ORTHO05D004696 7.9e-39 165.2 318 37.4
SalBow6G0476 Salvia bowleyana HOM05D004960 ORTHO05D004696 3.0e-38 163.3 314 38.5
Ciclev10008957m.g Citrus clementina HOM05D004960 ORTHO05D004696 6.7e-38 162.2 306 36.3
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 1.1e-37 161.4 322 37.6
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 1.1e-37 161.4 322 37.6
TWI32G0132 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 5.3e-35 152.5 320 34.7
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 1.2e-34 151.4 296 35.5
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 1.5e-34 151.0 302 33.8
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 1.5e-34 151.0 314 32.8
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 2.0e-34 150.6 307 33.6
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 2.6e-34 150.2 314 35.7
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 7.6e-34 148.7 314 33.1
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 2.2e-33 147.1 309 34.0
Dinv41299 Davidia involucrata HOM05D004960 ORTHO05D004696 3.8e-33 146.4 316 36.7
SalBow6G1594 Salvia bowleyana HOM05D004960 ORTHO05D004696 3.8e-33 146.4 247 39.3
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 3.2e-32 143.3 296 33.8
Lsat_1_v5_gn_8_65701 Lactuca sativa HOM05D004960 ORTHO05D004696 3.2e-32 143.3 311 34.1
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 3.2e-32 143.3 308 34.1
Actinidia38650 Actinidia chinensis HOM05D004960 ORTHO05D004696 2.1e-31 140.6 318 30.8
THA.LOC104803513 Tarenaya hassleriana HOM05D004960 ORTHO05D004696 2.1e-31 140.6 301 32.6
Manes.14G147200 Manihot esculenta HOM05D004960 ORTHO05D004696 6.1e-31 139.0 321 34.0
RcHm_v2.0_Chr4g0404721 Rosa chinensis HOM05D004960 ORTHO05D004696 7.9e-31 138.7 313 32.3
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 1.3e-30 137.9 317 33.1
Rhsim01G0010300 Rhododendron simsii HOM05D004960 ORTHO05D004696 6.7e-30 135.6 308 32.1
Actinidia35989 Actinidia chinensis HOM05D004960 ORTHO05D004696 1.1e-29 134.8 318 33.6
Migut.K00271 Erythranthe guttata HOM05D004960 ORTHO05D004696 3.3e-29 133.3 328 33.2
Migut.K00270 Erythranthe guttata HOM05D004960 ORTHO05D004696 7.4e-29 132.1 298 33.2
Hma1.2p1_0921F.1_g236770 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 7.4e-29 132.1 299 35.1
Hma1.2p1_0921F.1_g236794 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 7.4e-29 132.1 299 35.1
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 9.7e-29 131.7 326 35.3
Prupe.1G095700 Prunus persica HOM05D004960 ORTHO05D004696 1.8e-27 127.5 324 32.1
Migut.J01430 Erythranthe guttata HOM05D004960 ORTHO05D004696 9.0e-27 125.2 297 33.3
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 5.9e-26 122.5 298 30.5
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 7.7e-26 122.1 303 30.4
Oeu037995.1 Olea europaea HOM05D004960 ORTHO05D004696 1.0e-25 121.7 245 35.9
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.0e-25 121.7 307 34.5
PGR084G0002 Punica granatum HOM05D004960 ORTHO05D004696 2.2e-25 120.6 306 33.0
PGR142G0218 Punica granatum HOM05D004960 ORTHO05D004696 2.2e-25 120.6 306 33.0
TWI34G0908 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 2.2e-25 120.6 244 35.2
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 2.2e-25 120.6 296 31.4
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 2.9e-25 120.2 301 30.6
C04p38300 Brassica napus HOM05D004960 ORTHO05D004696 6.5e-25 119.0 319 31.0
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 6.5e-25 119.0 319 33.9
BcaB03g16662 Brassica carinata HOM05D004960 ORTHO05D004696 8.5e-25 118.6 305 31.8
BcaC04g21483 Brassica carinata HOM05D004960 ORTHO05D004696 8.5e-25 118.6 305 31.8
C09p31280 Brassica napus HOM05D004960 ORTHO05D004696 8.5e-25 118.6 305 31.8
Carub.0003s3296 Capsella rubella HOM05D004960 ORTHO05D004696 1.1e-24 118.2 295 35.3
Lsat_1_v5_gn_7_52700 Lactuca sativa HOM05D004960 ORTHO05D004696 1.1e-24 118.2 307 29.3
Aqoxy7G03208 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 1.9e-24 117.5 308 31.8
BolC9t54315H Brassica oleracea HOM05D004960 ORTHO05D004696 3.2e-24 116.7 306 30.4
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 5.5e-24 115.9 300 32.3
BcaC04g22889 Brassica carinata HOM05D004960 ORTHO05D004696 5.5e-24 115.9 306 30.4
C09p14170 Brassica napus HOM05D004960 ORTHO05D004696 5.5e-24 115.9 306 30.4
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 5.5e-24 115.9 324 32.7
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 5.5e-24 115.9 296 30.7
BraA04t16256Z Brassica rapa HOM05D004960 ORTHO05D004696 1.6e-23 114.4 320 30.0
Thecc.09G163000 Theobroma cacao HOM05D004960 ORTHO05D004696 2.1e-23 114.0 220 35.0
A09p12040 Brassica napus HOM05D004960 ORTHO05D004696 2.7e-23 113.6 306 30.4
BraA09t36847Z Brassica rapa HOM05D004960 ORTHO05D004696 2.7e-23 113.6 306 30.4
BraA07t27990Z Brassica rapa HOM05D004960 ORTHO05D004696 3.6e-23 113.2 305 30.2
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.6e-23 113.2 302 29.8
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 4.6e-23 112.8 292 31.8
Dinv42772 Davidia involucrata HOM05D004960 ORTHO05D004696 6.1e-23 112.5 213 39.9
BolC9t55984H Brassica oleracea HOM05D004960 ORTHO05D004696 7.9e-23 112.1 305 32.1
Migut.J01428 Erythranthe guttata HOM05D015143 ORTHO05D004696 7.9e-23 112.1 315 33.7
Nn2g12577 Nelumbo nucifera HOM05D004960 ORTHO05D004696 1.0e-22 111.7 323 29.4
MBI14_g30701_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.3e-22 110.5 301 31.2
ECA240G0411 Erigeron canadensis HOM05D004960 ORTHO05D004696 3.0e-22 110.2 306 32.7
BcaB07g31648 Brassica carinata HOM05D004960 ORTHO05D004696 3.9e-22 109.8 306 29.7
BcaC02g09087 Brassica carinata HOM05D004960 ORTHO05D004696 3.9e-22 109.8 319 30.7
AT2G18680 Arabidopsis thaliana HOM05D004960 ORTHO05D004696 2.0e-21 107.5 293 31.1
HanXRQChr03g0068481 Helianthus annuus HOM05D004960 ORTHO05D004696 2.0e-21 107.5 308 30.2
AL3G52080 Arabidopsis lyrata HOM05D004960 ORTHO05D004696 3.3e-21 106.7 291 30.9
Migut.J01427 Erythranthe guttata HOM05D015143 ORTHO05D004696 3.3e-21 106.7 332 33.4
C07p04050 Brassica napus HOM05D004960 ORTHO05D004696 4.3e-21 106.3 274 32.5
A07p01900 Brassica napus HOM05D004960 ORTHO05D004696 7.4e-21 105.5 291 29.6
Migut.J01429 Erythranthe guttata HOM05D015143 ORTHO05D004696 7.4e-21 105.5 327 31.5
ATR0580G065 Amborella trichopoda HOM05D004960 ORTHO05D004696 1.3e-20 104.8 301 29.2
CARHR109270 Cardamine hirsuta HOM05D004960 ORTHO05D004696 1.7e-20 104.4 287 31.0
A04p05570 Brassica napus HOM05D004960 ORTHO05D004696 2.2e-20 104.0 320 29.1
AT2G18690 Arabidopsis thaliana HOM05D004960 ORTHO05D004696 2.8e-20 103.6 304 28.9
Sp3g32170 Schrenkiella parvula HOM05D004960 ORTHO05D004696 2.8e-20 103.6 291 30.2
Cpa.g.c29666.2 Carica papaya HOM05D004960 ORTHO05D004696 4.8e-20 102.8 300 33.3
C03p59340 Brassica napus HOM05D004960 ORTHO05D004696 1.1e-19 101.7 311 30.2
Migut.J01431 Erythranthe guttata HOM05D015143 ORTHO05D004696 1.8e-19 100.9 391 30.9
BolC7t40796H Brassica oleracea HOM05D004960 ORTHO05D004696 4.1e-19 99.8 253 32.8
A06p33120 Brassica napus HOM05D004960 ORTHO05D004696 5.3e-19 99.4 308 30.2
Thhalv10022778m.g Eutrema salsugineum HOM05D004960 ORTHO05D004696 6.9e-19 99.0 311 30.5
Atru.chr12.164 Acer truncatum HOM05D004960 ORTHO05D004696 9.1e-19 98.6 210 34.3
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 9.1e-19 98.6 289 29.8
Nn8g40270 Nelumbo nucifera HOM05D004960 ORTHO05D004696 2.6e-18 97.1 305 26.9
Carub.0003s3294 Capsella rubella HOM05D004960 ORTHO05D004696 3.4e-18 96.7 293 30.0
Aqoxy7G03204 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 1.0e-17 95.1 303 28.4
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.0e-17 95.1 299 26.4
BraA06t26242Z Brassica rapa HOM05D004960 ORTHO05D004696 2.2e-17 94.0 307 29.6
BcaC01g02853 Brassica carinata HOM05D004960 ORTHO05D004696 2.9e-17 93.6 313 30.0
BolC3t18198H Brassica oleracea HOM05D004960 ORTHO05D004696 2.9e-17 93.6 313 30.0
Cpa.g.sc75.10 Carica papaya HOM05D004960 ORTHO05D004696 8.5e-17 92.0 262 32.4
Duzib168G0188 Durio zibethinus HOM05D004960 ORTHO05D004696 8.5e-17 92.0 307 28.0
HPP92_010759 Vanilla planifolia HOM05D004960 ORTHO05D004696 1.9e-16 90.9 292 26.7
Aqoxy7G03206 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 3.2e-16 90.1 303 28.7
HanXRQChr03g0068521 Helianthus annuus HOM05D004960 ORTHO05D004696 4.2e-16 89.7 242 28.5
Prupe.1G095800 Prunus persica HOM05D004960 ORTHO05D004696 4.2e-16 89.7 128 38.3
Actinidia35990 Actinidia chinensis HOM05D004960 ORTHO05D004696 1.6e-15 87.8 316 26.3
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.6e-15 87.8 290 27.6
BcaB08g34825 Brassica carinata HOM05D004960 ORTHO05D004696 2.1e-15 87.4 313 28.8
MBI14_g30695_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.1e-15 87.4 303 24.8
SalBow6G2608 Salvia bowleyana HOM05D050058 ORTHO05D004696 2.1e-15 87.4 291 30.6
SalBow6G5998 Salvia bowleyana HOM05D050058 ORTHO05D004696 1.4e-14 84.7 296 30.1
SalBow6G3434 Salvia bowleyana HOM05D015143 ORTHO05D004696 9.7e-13 78.6 315 29.5
SalBow6G6841 Salvia bowleyana HOM05D015143 ORTHO05D004696 9.7e-13 78.6 321 30.2
TAR626G1223 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.7e-12 76.6 298 26.5
TAR626G1419 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.7e-12 76.6 294 28.9
MBI14_g30697_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.4e-11 74.7 292 26.0
Lsat_1_v5_gn_7_52640 Lactuca sativa HOM05D012567 ORTHO05D004696 1.8e-11 74.3 296 27.0
CSS0038346 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 4.1e-11 73.2 288 25.7
HanXRQChr03g0074111 Helianthus annuus HOM05D012567 ORTHO05D004696 4.1e-11 73.2 307 26.7
TAR626G1398 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.1e-11 73.2 226 28.3
HanXRQChr03g0074151 Helianthus annuus HOM05D012567 ORTHO05D004696 5.3e-11 72.8 307 26.7
CSS0022952 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 7.0e-11 72.4 288 25.7
Nn1g04315 Nelumbo nucifera HOM05D004960 ORTHO05D004696 1.6e-10 71.2 221 28.1
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 2.6e-10 70.5 223 32.7
HanXRQChr09g0244301 Helianthus annuus HOM05D012567 ORTHO05D004696 2.6e-10 70.5 304 28.0
Aqoxy7G03202 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 3.5e-10 70.1 290 23.4
Lsat_1_v5_gn_7_52621 Lactuca sativa HOM05D012567 ORTHO05D004696 3.5e-10 70.1 298 26.5
Peaxi162Scf00457g00315 Petunia axillaris HOM05D004960 ORTHO05D004696 3.5e-10 70.1 129 34.1
Lsat_1_v5_gn_7_52661 Lactuca sativa HOM05D012567 ORTHO05D004696 4.5e-10 69.7 294 24.8
PSO063G2425 Papaver somniferum HOM05D004960 ORTHO05D004696 3.8e-09 66.6 303 26.4
HanXRQChr16g0510881 Helianthus annuus HOM05D001062 ORTHO05D000884 6.5e-09 65.9 305 26.9
Potri.010G250300 Populus trichocarpa HOM05D004960 ORTHO05D004696 6.5e-09 65.9 301 26.6
Eucgr.J03153 Eucalyptus grandis HOM05D004960 ORTHO05D004696 2.5e-08 63.9 306 24.5
Cfa002899 Carpinus fangiana HOM05D001062 ORTHO05D000884 9.4e-08 62.0 298 28.2
Oeu050117.1 Olea europaea HOM05D001062 ORTHO05D000884 9.4e-08 62.0 294 25.9
RcHm_v2.0_Chr4g0404701 Rosa chinensis HOM05D004960 ORTHO05D004696 9.4e-08 62.0 153 26.8
Lj4P839T38 Lonicera japonica HOM05D001062 ORTHO05D000884 1.6e-07 61.2 297 26.6
MBI14_g30699_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.6e-07 61.2 297 24.9
Dinv41298 Davidia involucrata HOM05D004960 ORTHO05D004696 2.1e-07 60.8 138 34.1
Glyma.11G178501 Glycine max HOM05D001062 ORTHO05D000884 4.7e-07 59.7 301 26.6
Glyma.13G037000 Glycine max HOM05D001062 ORTHO05D000884 4.7e-07 59.7 301 26.6
Atru.chr4.912 Acer truncatum HOM05D001062 ORTHO05D000884 1.0e-06 58.5 292 27.1
Lsat_1_v5_gn_5_30680 Lactuca sativa HOM05D001062 ORTHO05D000884 1.0e-06 58.5 285 24.6
Actinidia38795 Actinidia chinensis HOM05D004960 ORTHO05D004696 2.3e-06 57.4 288 26.4
Oeu004239.1 Olea europaea HOM05D001062 ORTHO05D000884 2.3e-06 57.4 216 28.2
PSO675G0698 Papaver somniferum HOM05D001062 ORTHO05D000884 2.3e-06 57.4 282 26.2
PSO675G1304 Papaver somniferum HOM05D001062 ORTHO05D000884 2.3e-06 57.4 282 26.2
RcHm_v2.0_Chr5g0020421 Rosa chinensis HOM05D001062 ORTHO05D000884 2.3e-06 57.4 282 25.2
TWI12G0641 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 2.3e-06 57.4 302 25.2
Pp3c6_23080 Physcomitrium patens HOM05D001062 ORTHO05D000884 3.0e-06 57.0 290 26.6
TAR628G1608 Trochodendron aralioides HOM05D001062 ORTHO05D000884 3.0e-06 57.0 305 26.9
BcaC06g36453 Brassica carinata HOM05D004960 ORTHO05D004696 4.0e-06 56.6 210 30.0
DCAR_007771 Daucus carota HOM05D001062 ORTHO05D000884 4.0e-06 56.6 306 26.8
ECA240G1251 Erigeron canadensis HOM05D012567 ORTHO05D004696 4.0e-06 56.6 211 28.4
HanXRQChr06g0167601 Helianthus annuus HOM05D012567 ORTHO05D004696 4.0e-06 56.6 297 24.2
PSO675G9215 Papaver somniferum HOM05D001062 ORTHO05D000884 5.2e-06 56.2 205 27.3
Prupe.4G113700 Prunus persica HOM05D001062 ORTHO05D000884 5.2e-06 56.2 206 28.6
Haze_25242 Corylus avellana HOM05D001062 ORTHO05D000884 6.7e-06 55.8 297 26.9
TAR381G1261 Trochodendron aralioides HOM05D001062 ORTHO05D000884 8.8e-06 55.5 291 27.1


User provided reference genes

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