Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024902.1 Olea europaea HOM05D003946 ORTHO05D004485 6.4e-132 474.2 254 100.0
Lalb_Chr07g0193951 Lupinus albus HOM05D003946 ORTHO05D004485 2.3e-41 173.3 139 67.6
TAR625G1091 Trochodendron aralioides HOM05D003946 ORTHO05D004485 8.9e-41 171.4 139 66.2
PGR001G0003 Punica granatum HOM05D003946 ORTHO05D004485 3.4e-40 169.5 120 74.2
PGR044G0462 Punica granatum HOM05D003946 ORTHO05D004485 3.4e-40 169.5 120 74.2
CDE04G0594 Ceratophyllum demersum HOM05D003946 ORTHO05D004485 5.8e-40 168.7 120 73.3
FAN21G2611 Fragaria x ananassa HOM05D003946 ORTHO05D004485 7.5e-40 168.3 139 64.7
TAR636G0475 Trochodendron aralioides HOM05D003946 ORTHO05D004485 7.5e-40 168.3 120 74.2
CDE02G3171 Ceratophyllum demersum HOM05D003946 ORTHO05D004485 1.7e-39 167.2 141 66.0
Phvul.008G125199 Phaseolus vulgaris HOM05D003946 ORTHO05D004485 2.2e-39 166.8 120 71.7
SalBow6G3589 Salvia bowleyana HOM05D003946 ORTHO05D004485 3.7e-39 166.0 119 83.2
Lj4g0012280 Lotus japonicus HOM05D003946 ORTHO05D004485 4.9e-39 165.6 120 72.5
Gohir.D04G087100 Gossypium hirsutum HOM05D003946 ORTHO05D004485 6.4e-39 165.2 120 71.7
Gorai.012G097100 Gossypium raimondii HOM05D003946 ORTHO05D004485 6.4e-39 165.2 120 71.7
Eucgr.C00110 Eucalyptus grandis HOM05D003946 ORTHO05D004485 8.3e-39 164.9 120 70.0
VMungo1383G2940 Vigna mungo HOM05D003946 ORTHO05D004485 8.3e-39 164.9 120 70.8
ECA234G2728 Erigeron canadensis HOM05D004005 ORTHO05D004876 1.1e-38 164.5 131 65.6
Peaxi162Scf00038g00224 Petunia axillaris HOM05D003946 ORTHO05D004485 1.4e-38 164.1 119 72.3
Carub.0007s1011 Capsella rubella HOM05D003946 ORTHO05D004485 1.9e-38 163.7 120 73.3
Glyma.18G174600 Glycine max HOM05D003946 ORTHO05D004485 1.9e-38 163.7 120 70.0
PSO210G1136 Papaver somniferum HOM05D003946 ORTHO05D004485 1.9e-38 163.7 120 70.8
PSO832G3676 Papaver somniferum HOM05D003946 ORTHO05D004485 1.9e-38 163.7 120 70.8
Sed0010600 Sechium edule HOM05D003946 ORTHO05D004485 1.9e-38 163.7 118 70.3
CARHR238370 Cardamine hirsuta HOM05D003946 ORTHO05D004485 2.4e-38 163.3 120 74.2
Aa31LG2G20050 Aethionema arabicum HOM05D003946 ORTHO05D004485 3.2e-38 162.9 120 70.8
TPR.G23301 Trifolium pratense HOM05D003946 ORTHO05D004485 4.1e-38 162.5 139 64.7
Duzib150G0638 Durio zibethinus HOM05D003946 ORTHO05D004485 5.4e-38 162.2 141 71.6
PSO063G3610 Papaver somniferum HOM05D003946 ORTHO05D004485 5.4e-38 162.2 139 64.0
MELO3C004108.2 Cucumis melo HOM05D003946 ORTHO05D004485 7.1e-38 161.8 118 69.5
ClCG11G012680 Citrullus lanatus HOM05D003946 ORTHO05D004485 9.2e-38 161.4 118 69.5
Medtr2g090135 Medicago truncatula HOM05D003946 ORTHO05D004485 1.6e-37 160.6 120 70.0
SGA_v2.0_scaffold293G47418 Striga asiatica HOM05D003946 ORTHO05D004485 1.6e-37 160.6 120 80.8
AL7G21660 Arabidopsis lyrata HOM05D003946 ORTHO05D004485 2.1e-37 160.2 120 72.5
Psat3g143400 Pisum sativum HOM05D003946 ORTHO05D004485 2.1e-37 160.2 120 70.8
CSS0017975 Camellia sinensis var. sinensis HOM05D003946 ORTHO05D004485 2.7e-37 159.8 120 70.8
CSS0020287 Camellia sinensis var. sinensis HOM05D003946 ORTHO05D004485 2.7e-37 159.8 120 70.8
SEGI_31472 Sequoiadendron giganteum HOM05D003946 ORTHO05D004485 3.5e-37 159.5 121 69.4
Cfa012892 Carpinus fangiana HOM05D003946 ORTHO05D004485 4.6e-37 159.1 139 70.5
CsaV3_2G007790 Cucumis sativus L. HOM05D003946 ORTHO05D004485 4.6e-37 159.1 118 68.6
Gohir.A05G345884 Gossypium hirsutum HOM05D003946 ORTHO05D004485 4.6e-37 159.1 139 64.7
TPR.G35554 Trifolium pratense HOM05D003946 ORTHO05D004485 4.6e-37 159.1 120 69.2
Haze_21259 Corylus avellana HOM05D003946 ORTHO05D004485 6.0e-37 158.7 139 70.5
arahy.Tifrunner.gnm1.ann1.69CB9U Arachis hypogaea HOM05D003946 ORTHO05D004485 7.8e-37 158.3 120 68.3
Ciclev10009155m.g Citrus clementina HOM05D003946 ORTHO05D004485 7.8e-37 158.3 120 78.3
Migut.K00288 Erythranthe guttata HOM05D003946 ORTHO05D004485 7.8e-37 158.3 120 78.3
Thecc.09G157800 Theobroma cacao HOM05D003946 ORTHO05D004485 1.0e-36 157.9 120 79.2
Nn2g14258 Nelumbo nucifera HOM05D003946 ORTHO05D004485 1.7e-36 157.1 120 70.0
Prupe.1G099700 Prunus persica HOM05D003946 ORTHO05D004485 2.3e-36 156.8 136 72.1
Prupe.8G039000 Prunus persica HOM05D003946 ORTHO05D004485 3.0e-36 156.4 120 77.5
unitig_62.g23482 Utricularia gibba HOM05D003946 ORTHO05D004485 3.0e-36 156.4 165 63.6
BcaB06g27947 Brassica carinata HOM05D003946 ORTHO05D004485 3.9e-36 156.0 120 69.2
Cc06_g14380 Coffea canephora HOM05D003946 ORTHO05D004485 3.9e-36 156.0 118 78.8
Nitab4.5_0002545g0010 Nicotiana tabacum HOM05D003946 ORTHO05D004485 5.1e-36 155.6 120 78.3
Gohir.D05G008000 Gossypium hirsutum HOM05D003946 ORTHO05D004485 6.6e-36 155.2 119 66.4
Medtr7g059150 Medicago truncatula HOM05D003946 ORTHO05D004485 6.6e-36 155.2 139 62.6
CiPaw.10G166500 Carya illinoinensis HOM05D003946 ORTHO05D004485 1.1e-35 154.5 120 76.7
HanXRQChr09g0244711 Helianthus annuus HOM05D003946 ORTHO05D004485 1.1e-35 154.5 131 71.8
Nitab4.5_0003269g0040 Nicotiana tabacum HOM05D003946 ORTHO05D004485 1.5e-35 154.1 120 77.5
Peaxi162Scf00038g00222 Petunia axillaris HOM05D003946 ORTHO05D004485 1.5e-35 154.1 120 77.5
CAN.G1190.24 Capsicum annuum HOM05D003946 ORTHO05D004485 1.9e-35 153.7 120 76.7
Ciclev10010190m.g Citrus clementina HOM05D003946 ORTHO05D004485 2.5e-35 153.3 146 59.6
Gohir.A05G007100 Gossypium hirsutum HOM05D003946 ORTHO05D004485 2.5e-35 153.3 119 66.4
Hma1.2p1_2732F.1_g327665 Hydrangea macrophylla HOM05D003946 ORTHO05D004485 3.3e-35 152.9 120 75.8
Ca_01517_v3 Cicer arietinum L. HOM05D003946 ORTHO05D004485 4.3e-35 152.5 120 66.7
HanXRQChr03g0065991 Helianthus annuus HOM05D003946 ORTHO05D004485 4.3e-35 152.5 131 71.8
Psat5g270480 Pisum sativum HOM05D003946 ORTHO05D004485 4.3e-35 152.5 120 66.7
Solyc07g006180.3 Solanum lycopersicum HOM05D003946 ORTHO05D004485 5.6e-35 152.1 120 76.7
PGSC0003DMG400011219 Solanum tuberosum HOM05D003946 ORTHO05D004485 5.6e-35 152.1 120 75.8
CAN.G363.9 Capsicum annuum HOM05D003946 ORTHO05D004485 7.3e-35 151.8 120 75.8
Duzib187G0180 Durio zibethinus HOM05D003946 ORTHO05D004485 7.3e-35 151.8 120 76.7
Duzib187G0394 Durio zibethinus HOM05D003946 ORTHO05D004485 7.3e-35 151.8 120 76.7
Thhalv10025952m.g Eutrema salsugineum HOM05D003946 ORTHO05D004485 7.3e-35 151.8 120 76.7
C07p57950 Brassica napus HOM05D003946 ORTHO05D004485 1.2e-34 151.0 120 77.5
BolC7t46253H Brassica oleracea HOM05D003946 ORTHO05D004485 1.2e-34 151.0 120 77.5
Sopen07g002290 Solanum pennellii HOM05D003946 ORTHO05D004485 1.2e-34 151.0 120 75.8
FvH4_3g34740 Fragaria vesca HOM05D003946 ORTHO05D004485 1.6e-34 150.6 139 66.9
FAN11G0842 Fragaria x ananassa HOM05D003946 ORTHO05D004485 1.6e-34 150.6 139 66.9
FAN15G3651 Fragaria x ananassa HOM05D003946 ORTHO05D004485 1.6e-34 150.6 139 66.9
FAN16G0870 Fragaria x ananassa HOM05D003946 ORTHO05D004485 1.6e-34 150.6 139 66.9
Gorai.009G008100 Gossypium raimondii HOM05D003946 ORTHO05D004485 1.6e-34 150.6 120 65.8
Cpa.g.sc37.157 Carica papaya HOM05D003946 ORTHO05D004485 2.1e-34 150.2 120 75.8
Sp7g28360 Schrenkiella parvula HOM05D003946 ORTHO05D004485 2.1e-34 150.2 120 77.5
TWI34G0749 Tripterygium wilfordii HOM05D003946 ORTHO05D004485 2.8e-34 149.8 157 62.4
Aqoxy3G01561 Aquilegia oxysepala HOM05D003946 ORTHO05D004485 4.7e-34 149.1 159 61.0
FAN25G1583 Fragaria x ananassa HOM05D003946 ORTHO05D004485 4.7e-34 149.1 139 66.2
TWI63G1262 Tripterygium wilfordii HOM05D003946 ORTHO05D004485 6.2e-34 148.7 139 66.9
Os10g0486900 Oryza sativa ssp. japonica HOM05D003946 ORTHO05D004485 8.1e-34 148.3 159 60.4
THA.LOC104803531 Tarenaya hassleriana HOM05D003946 ORTHO05D004485 8.1e-34 148.3 120 75.8
MD04G1009600 Malus domestica HOM05D003946 ORTHO05D004485 1.1e-33 147.9 139 67.6
COL.COLO4_10067 Corchorus olitorius HOM05D003946 ORTHO05D004485 2.3e-33 146.7 119 73.9
FAN27G0955 Fragaria x ananassa HOM05D003946 ORTHO05D004485 2.3e-33 146.7 139 64.7
EL10Ac8g18885 Beta vulgaris HOM05D003946 ORTHO05D004485 3.1e-33 146.4 155 61.9
Lsat_1_v5_gn_5_88241 Lactuca sativa HOM05D003946 ORTHO05D004485 3.1e-33 146.4 129 69.8
RcHm_v2.0_Chr4g0405181 Rosa chinensis HOM05D003946 ORTHO05D004485 4.0e-33 146.0 139 66.2
QL02p094618 Quercus lobata HOM05D003946 ORTHO05D004485 5.2e-33 145.6 119 73.1
Actinidia18308 Actinidia chinensis HOM05D003946 ORTHO05D004485 6.8e-33 145.2 120 73.3
DCAR_014726 Daucus carota HOM05D003946 ORTHO05D004485 8.9e-33 144.8 118 62.7
HPP92_017289 Vanilla planifolia HOM05D003946 ORTHO05D004485 8.9e-33 144.8 110 68.2
Potri.006G178900 Populus trichocarpa HOM05D003946 ORTHO05D004485 1.5e-32 144.1 120 72.5
Lsat_1_v5_gn_7_51160 Lactuca sativa HOM05D003946 ORTHO05D004485 2.0e-32 143.7 131 67.2
Ah.09g228630 Amaranthus hybridus HOM05D003946 ORTHO05D004485 2.6e-32 143.3 158 62.0
Lj9A725T27 Lonicera japonica HOM05D003946 ORTHO05D004485 2.6e-32 143.3 136 69.1
Zm00001eb060560 Zea mays HOM05D003946 ORTHO05D004485 2.6e-32 143.3 120 71.7
MD16G1260600 Malus domestica HOM05D003946 ORTHO05D004485 3.4e-32 142.9 118 73.7
Zm00001eb365370 Zea mays HOM05D003946 ORTHO05D004485 4.4e-32 142.5 120 70.8
AUR62028392 Chenopodium quinoa HOM05D003946 ORTHO05D004485 5.8e-32 142.1 120 71.7
Actinidia38658 Actinidia chinensis HOM05D003946 ORTHO05D004485 7.6e-32 141.7 120 73.3
Potri.018G100700 Populus trichocarpa HOM05D003946 ORTHO05D004485 7.6e-32 141.7 120 71.7
Sabra06G0135900 Salix brachista HOM05D003946 ORTHO05D004485 7.6e-32 141.7 120 71.7
BraA04t17439Z Brassica rapa HOM05D003946 ORTHO05D004485 9.9e-32 141.4 120 73.3
Rhsim03G0261300 Rhododendron simsii HOM05D003946 ORTHO05D004485 9.9e-32 141.4 120 72.5
Sc18g0003220 Simmondsia chinensis HOM05D003946 ORTHO05D004485 1.3e-31 141.0 120 72.5
vmacro06046 Vaccinium macrocarpon HOM05D003946 ORTHO05D004485 1.3e-31 141.0 141 64.5
Atru.chr7.424 Acer truncatum HOM05D003946 ORTHO05D004485 2.2e-31 140.2 118 72.0
A04p18280 Brassica napus HOM05D003946 ORTHO05D004485 3.8e-31 139.4 138 65.2
Thhalv10000290m.g Eutrema salsugineum HOM05D003946 ORTHO05D004485 3.8e-31 139.4 120 71.7
Sp4g02820 Schrenkiella parvula HOM05D003946 ORTHO05D004485 3.8e-31 139.4 138 64.5
BcaC02g08518 Brassica carinata HOM05D003946 ORTHO05D004485 4.9e-31 139.0 120 71.7
C04p53510 Brassica napus HOM05D003946 ORTHO05D004485 4.9e-31 139.0 120 71.7
GSVIVG01023716001 Vitis vinifera HOM05D003946 ORTHO05D004485 8.4e-31 138.3 118 72.9
Mapoly0119s0026 Marchantia polymorpha HOM05D003946 ORTHO05D004485 9.2e-30 134.8 116 61.2
PSO782G1270 Papaver somniferum HOM05D003946 ORTHO05D004485 1.2e-29 134.4 120 62.5
Nn8g40208 Nelumbo nucifera HOM05D003946 ORTHO05D004485 1.6e-29 134.0 120 70.0
Sed0007467 Sechium edule HOM05D003946 ORTHO05D004485 2.1e-29 133.7 118 67.8
Ah.14g084270 Amaranthus hybridus HOM05D003946 ORTHO05D004485 3.5e-29 132.9 120 68.3
CBR_g12383 Chara braunii HOM05D003946 ORTHO05D004485 1.7e-28 130.6 118 58.5
Dinv42798 Davidia involucrata HOM05D003946 ORTHO05D004485 5.1e-28 129.0 120 66.7
Dinv43303 Davidia involucrata HOM05D003946 ORTHO05D004485 5.1e-28 129.0 120 66.7
AL4G13950 Arabidopsis lyrata HOM05D003946 ORTHO05D004485 5.6e-27 125.6 120 67.5
Glyma.13G354200 Glycine max HOM05D003946 ORTHO05D004485 2.1e-26 123.6 141 54.6
Dinv41322 Davidia involucrata HOM05D003946 ORTHO05D004485 1.1e-25 121.3 120 65.0
Glyma.08G356700 Glycine max HOM05D003946 ORTHO05D004485 2.9e-23 113.2 118 64.4
SMO361G0476 Selaginella moellendorffii HOM05D003946 ORTHO05D004485 3.8e-23 112.8 118 56.8
C01p08570 Brassica napus HOM05D003946 ORTHO05D004485 4.9e-23 112.5 71 83.1
FvH4_4g08690 Fragaria vesca HOM05D003946 ORTHO05D004485 8.4e-23 111.7 122 61.5
Cre02.g075100 Chlamydomonas reinhardtii HOM05D003946 ORTHO05D004485 1.1e-22 111.3 118 46.6
A01p07700 Brassica napus HOM05D003946 ORTHO05D004485 4.2e-22 109.4 71 81.7
BolC4t26905H Brassica oleracea HOM05D003946 ORTHO05D004485 4.2e-22 109.4 104 68.3
BraA01t00713Z Brassica rapa HOM05D003946 ORTHO05D004485 4.2e-22 109.4 71 81.7
AUR62039767 Chenopodium quinoa HOM05D003946 ORTHO05D004485 7.1e-22 108.6 120 50.8
BcaNung00558 Brassica carinata HOM05D003946 ORTHO05D004485 9.3e-22 108.2 115 63.5
Pp3c8_13040 Physcomitrium patens HOM05D003946 ORTHO05D004485 1.0e-20 104.8 117 55.6
arahy.Tifrunner.gnm1.ann1.5R3BA8 Arachis hypogaea HOM05D003946 ORTHO05D004485 7.3e-19 98.6 102 54.9
arahy.Tifrunner.gnm1.ann1.8RX8VY Arachis hypogaea HOM05D003946 ORTHO05D004485 7.3e-19 98.6 102 54.9
Cc00_g22900 Coffea canephora HOM05D003946 ORTHO05D004485 7.3e-19 98.6 69 73.9
Cc00_g34860 Coffea canephora HOM05D003946 ORTHO05D004485 7.3e-19 98.6 69 73.9
Ca_01529_v3 Cicer arietinum L. HOM05D003946 ORTHO05D004485 3.6e-18 96.3 83 62.7
arahy.Tifrunner.gnm1.ann1.TB3RSS Arachis hypogaea HOM05D003946 ORTHO05D004485 6.2e-18 95.5 85 56.5
MCO12G083 Micromonas commoda HOM05D003946 ORTHO05D004485 1.4e-17 94.4 118 44.1
arahy.Tifrunner.gnm1.ann1.43EHF4 Arachis hypogaea HOM05D003946 ORTHO05D004485 2.4e-17 93.6 110 47.3
arahy.Tifrunner.gnm1.ann1.H72Z00 Arachis hypogaea HOM05D003946 ORTHO05D005257 1.5e-16 90.9 85 56.5
Manes.14G148900 Manihot esculenta HOM05D003946 ORTHO05D004485 2.0e-16 90.5 110 60.0
PRCOL_00003553 Prasinoderma coloniale HOM05D003946 ORTHO05D004485 7.6e-16 88.6 115 43.5
Aqoxy4G03046 Aquilegia oxysepala HOM05D002273 ORTHO05D004485 2.4e-14 83.6 113 47.8
FAN12G3120 Fragaria x ananassa HOM05D003946 ORTHO05D004485 4.2e-14 82.8 101 59.4
arahy.Tifrunner.gnm1.ann1.9J99EW Arachis hypogaea HOM05D003946 ORTHO05D004485 9.3e-14 81.6 75 57.3
Sc18g0003210 Simmondsia chinensis HOM05D003946 ORTHO05D004485 1.3e-12 77.8 152 44.1
CAN.G346.10 Capsicum annuum HOM05D003946 ORTHO05D013825 2.3e-12 77.0 84 50.0
arahy.Tifrunner.gnm1.ann1.R2S7J0 Arachis hypogaea HOM05D005468 ORTHO05D004485 8.7e-12 75.1 112 42.9
ATR0763G121 Amborella trichopoda HOM05D003946 ORTHO05D004485 1.9e-11 73.9 43 81.4
Duzib168G2206 Durio zibethinus HOM05D003946 ORTHO05D004485 9.6e-11 71.6 81 56.8
CAN.G14.20 Capsicum annuum HOM05D001503 ORTHO05D013825 2.8e-10 70.1 82 50.0
BcaNung02985 Brassica carinata HOM05D003946 ORTHO05D004485 3.6e-10 69.7 53 67.9
Cc00_g31770 Coffea canephora HOM05D003946 ORTHO05D004485 6.9e-09 65.5 60 55.0
ATR0763G144 Amborella trichopoda HOM05D003946 ORTHO05D004485 2.0e-08 63.9 58 63.8
AagrBONN_evm.TU.Sc2ySwM_117.755 Anthoceros agrestis HOM05D003946 ORTHO05D004485 2.0e-08 63.9 35 85.7
FAN12G1528 Fragaria x ananassa HOM05D003946 ORTHO05D004485 3.8e-07 59.7 86 54.7
arahy.Tifrunner.gnm1.ann1.SKCH66 Arachis hypogaea HOM05D001329 ORTHO05D023724 4.2e-06 56.2 63 49.2


User provided reference genes

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