Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024704.1 Olea europaea HOM05D004430 ORTHO05D005088 0.0e+00 2906.7 1610 100.0
Oeu036008.4 Olea europaea HOM05D004430 ORTHO05D005088 0.0e+00 1164.8 1637 47.4
Dinv20629 Davidia involucrata HOM05D004430 ORTHO05D005088 0.0e+00 1103.2 1673 45.0
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 2.9e-286 989.6 1663 43.2
Migut.D01964 Erythranthe guttata HOM05D004430 ORTHO05D005088 9.6e-282 974.5 1682 43.5
SalBow6G6905 Salvia bowleyana HOM05D004430 ORTHO05D005088 4.6e-276 955.7 1680 41.8
SalBow6G6763 Salvia bowleyana HOM05D004430 ORTHO05D005088 1.0e-275 954.5 1680 41.8
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 5.1e-275 952.2 1654 42.2
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 1.1e-274 951.0 1686 40.5
MSTRG.4361 Avicennia marina HOM05D004430 ORTHO05D005088 1.9e-269 933.7 1662 42.1
GSVIVG01007703001 Vitis vinifera HOM05D004430 ORTHO05D005088 1.6e-268 930.6 1633 40.7
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 1.1e-266 924.5 1661 41.7
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 7.4e-266 921.8 1692 41.8
Atru.chr9.2519 Acer truncatum HOM05D004430 ORTHO05D005088 2.9e-262 909.8 1724 39.3
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 3.3e-258 896.3 1648 40.7
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 8.5e-254 881.7 1648 40.4
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 5.0e-246 855.9 1683 39.4
Thecc.03G018800 Theobroma cacao HOM05D004430 ORTHO05D005088 1.1e-245 854.7 1668 39.2
Cc04_g12380 Coffea canephora HOM05D004430 ORTHO05D005088 1.4e-245 854.4 1360 44.6
vmacro19413 Vaccinium macrocarpon HOM05D004430 ORTHO05D005088 1.1e-240 838.2 1653 39.6
RcHm_v2.0_Chr7g0193171 Rosa chinensis HOM05D004430 ORTHO05D005088 1.6e-239 834.3 1639 39.5
COL.COLO4_30100 Corchorus olitorius HOM05D004430 ORTHO05D005088 6.7e-235 818.9 1679 38.6
Glyma.17G087600 Glycine max HOM05D004430 ORTHO05D005088 8.2e-233 812.0 1664 37.9
Potri.015G079800 Populus trichocarpa HOM05D004430 ORTHO05D005088 1.6e-231 807.7 1667 37.3
TWI39G0976 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 7.7e-231 805.4 1675 37.7
Lj4g0003819 Lotus japonicus HOM05D004430 ORTHO05D005088 1.6e-228 797.7 1676 37.6
Gorai.005G135600 Gossypium raimondii HOM05D004430 ORTHO05D005088 1.0e-227 795.0 1670 38.7
Gohir.A03G089900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 1.4e-227 794.7 1669 38.1
Gohir.D02G117900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 1.4e-227 794.7 1670 38.6
MD06G1170800 Malus domestica HOM05D004430 ORTHO05D005088 3.0e-227 793.5 1665 38.4
Prupe.5G170400 Prunus persica HOM05D004430 ORTHO05D005088 6.8e-227 792.3 1687 42.3
Lalb_Chr12g0201701 Lupinus albus HOM05D004430 ORTHO05D005088 1.1e-224 785.0 1676 38.0
Rhsim08G0174600 Rhododendron simsii HOM05D004430 ORTHO05D005088 2.4e-224 783.9 1627 39.0
Potri.012G088500 Populus trichocarpa HOM05D004430 ORTHO05D005088 4.1e-224 783.1 1674 36.6
Duzib084G1065 Durio zibethinus HOM05D004430 ORTHO05D005088 1.2e-223 781.6 1680 37.0
TAR374G1038 Trochodendron aralioides HOM05D004430 ORTHO05D005088 7.7e-223 778.9 1736 37.0
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 1.3e-222 778.1 1636 36.8
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 1.5e-221 774.6 1634 38.4
FvH4_5g05640 Fragaria vesca HOM05D004430 ORTHO05D005088 5.5e-221 772.7 1666 37.3
Duzib068G0887 Durio zibethinus HOM05D004430 ORTHO05D005088 2.1e-220 770.8 1673 37.6
Duzib205G1695 Durio zibethinus HOM05D004430 ORTHO05D005088 5.2e-219 766.1 1681 37.3
Lalb_Chr07g0182821 Lupinus albus HOM05D004430 ORTHO05D005088 2.0e-218 764.2 1667 37.3
TWI14G0761 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 3.7e-217 760.0 1687 36.5
QL10p008934 Quercus lobata HOM05D004430 ORTHO05D005088 8.3e-217 758.8 1676 36.6
FAN13G0016 Fragaria x ananassa HOM05D004430 ORTHO05D005088 5.0e-214 749.6 1633 37.4
VMungo1215G2998 Vigna mungo HOM05D004430 ORTHO05D005088 2.1e-212 744.2 1673 39.3
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 1.4e-211 741.5 1669 36.2
arahy.Tifrunner.gnm1.ann1.FBBL0Z Arachis hypogaea HOM05D004430 ORTHO05D005088 1.5e-210 738.0 1671 35.7
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 2.0e-210 737.6 1672 36.7
Sabra12G0063700 Salix brachista HOM05D004430 ORTHO05D005088 5.7e-210 736.1 1730 35.1
Glyma.05G039400 Glycine max HOM05D004430 ORTHO05D005088 1.7e-209 734.6 1664 36.2
MD14G1176500 Malus domestica HOM05D004430 ORTHO05D005088 1.7e-209 734.6 1679 36.9
FAN18G2048 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.2e-207 728.4 1629 37.0
FAN18G1146 Fragaria x ananassa HOM05D004430 ORTHO05D005088 5.9e-207 726.1 1663 36.3
FAN08G1542 Fragaria x ananassa HOM05D004430 ORTHO05D005088 2.3e-206 724.2 1639 36.6
Manes.06G107300 Manihot esculenta HOM05D004430 ORTHO05D005088 1.2e-202 711.8 1689 36.4
FAN04G2171 Fragaria x ananassa HOM05D004430 ORTHO05D005088 4.4e-202 709.9 1633 35.9
SGA_v2.0_scaffold7G04148 Striga asiatica HOM05D004430 ORTHO05D005088 4.9e-201 706.4 1494 39.3
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 2.0e-199 701.0 1660 35.5
AUR62028764 Chenopodium quinoa HOM05D004430 ORTHO05D005088 2.7e-199 700.7 1668 35.7
TPR.G28716 Trifolium pratense HOM05D004430 ORTHO05D005088 2.7e-199 700.7 1659 36.4
Phvul.003G202300 Phaseolus vulgaris HOM05D004430 ORTHO05D005088 8.6e-190 669.1 1658 37.8
AUR62008183 Chenopodium quinoa HOM05D004430 ORTHO05D005088 3.6e-188 663.7 1655 34.5
Nn3g16781 Nelumbo nucifera HOM05D004430 ORTHO05D005088 1.4e-187 661.8 1710 34.7
Ca_16154_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 1.2e-186 658.7 1649 35.1
ClCG06G017130 Citrullus lanatus HOM05D004430 ORTHO05D005088 9.2e-184 649.0 1662 35.0
CANSAT80G0620 Cannabis sativa HOM05D004430 ORTHO05D005088 2.7e-183 647.5 1690 33.9
Ca_16155_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 3.5e-183 647.1 1632 35.2
PGSC0003DMG402018164 Solanum tuberosum HOM05D004430 ORTHO05D005088 5.1e-182 643.3 1389 37.1
CsaV3_1G001360 Cucumis sativus L. HOM05D004430 ORTHO05D005088 1.1e-181 642.1 1658 34.7
MELO3C026283.2 Cucumis melo HOM05D004430 ORTHO05D005088 1.7e-177 628.2 1663 34.7
Ciclev10018497m.g Citrus clementina HOM05D004430 ORTHO05D005088 5.4e-176 623.2 1474 34.7
PGR083G1025 Punica granatum HOM05D004430 ORTHO05D005088 3.9e-174 617.1 1688 34.1
Medtr3g077440 Medicago truncatula HOM05D004430 ORTHO05D005088 4.8e-172 610.1 1659 34.2
EL10Ac5g10708 Beta vulgaris HOM05D004430 ORTHO05D005088 1.3e-169 602.1 1669 34.8
CiPaw.11G023400 Carya illinoinensis HOM05D004430 ORTHO05D005088 1.1e-168 599.0 1514 36.7
ECA232G4503 Erigeron canadensis HOM05D004430 ORTHO05D005088 1.1e-168 599.0 1628 35.0
unitig_37.g12744 Utricularia gibba HOM05D004430 ORTHO05D005088 1.4e-168 598.6 1634 34.0
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 1.3e-166 592.0 1645 32.9
Actinidia19338 Actinidia chinensis HOM05D004430 ORTHO05D005088 2.3e-166 591.3 1289 36.5
Ah.11g051460 Amaranthus hybridus HOM05D004430 ORTHO05D005088 5.8e-162 576.6 1670 33.1
Sed0007760 Sechium edule HOM05D004430 ORTHO05D005088 2.9e-161 574.3 1646 32.8
MBI19_g24062_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 1.5e-157 562.0 1777 32.0
THA.LOC104809247 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 2.4e-155 554.7 1638 31.9
Hund02762 Selenicereus undatus HOM05D004430 ORTHO05D005088 4.0e-155 553.9 1636 32.2
Sc04g0001690 Simmondsia chinensis HOM05D004430 ORTHO05D005088 1.8e-150 538.5 1611 32.8
Lsat_1_v5_gn_4_75700 Lactuca sativa HOM05D004430 ORTHO05D005088 3.8e-145 520.8 1236 36.7
TPR.G28721 Trifolium pratense HOM05D004430 ORTHO05D005088 6.5e-145 520.0 1669 32.1
Medtr3g077450 Medicago truncatula HOM05D004430 ORTHO05D005088 1.1e-144 519.2 1652 33.8
THA.LOC104809778 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 9.3e-144 516.2 1649 32.0
Aqoxy3G01105 Aquilegia oxysepala HOM05D004430 ORTHO05D005088 7.4e-141 506.5 1703 31.1
CiPaw.12G028500 Carya illinoinensis HOM05D004430 ORTHO05D005088 5.9e-138 496.9 1432 31.8
Psat5g115080 Pisum sativum HOM05D004430 ORTHO05D005088 2.5e-136 491.5 1632 31.3
Psat5g115040 Pisum sativum HOM05D004430 ORTHO05D005088 1.4e-134 485.7 1640 31.3
PSO017G2086 Papaver somniferum HOM05D004430 ORTHO05D005088 3.3e-133 481.1 1765 30.5
PSO478G3312 Papaver somniferum HOM05D004430 ORTHO05D005088 1.7e-132 478.8 1779 30.0
HanXRQChr17g0548691 Helianthus annuus HOM05D004430 ORTHO05D005088 2.2e-129 468.4 1481 32.9
HanXRQChr11g0348291 Helianthus annuus HOM05D004430 ORTHO05D005088 3.9e-126 457.6 711 43.9
Sp7g22670 Schrenkiella parvula HOM05D004430 ORTHO05D005088 3.1e-123 448.0 1639 29.5
arahy.Tifrunner.gnm1.ann1.I95HTR Arachis hypogaea HOM05D004430 ORTHO05D005088 5.7e-117 427.2 734 39.9
Aa31LG4G9770 Aethionema arabicum HOM05D004430 ORTHO05D005088 9.7e-117 426.4 1678 29.5
AT4G24680 Arabidopsis thaliana HOM05D004430 ORTHO05D005088 6.3e-116 423.7 1652 28.3
A03p55450 Brassica napus HOM05D004430 ORTHO05D005088 2.4e-115 421.8 1623 29.2
BraA03t14619Z Brassica rapa HOM05D004430 ORTHO05D005088 9.1e-115 419.9 1627 29.1
Hma1.2p1_0046F.1_g026730 Hydrangea macrophylla HOM05D004430 ORTHO05D005088 4.5e-114 417.5 1237 34.1
AL7G28520 Arabidopsis lyrata HOM05D004430 ORTHO05D005088 1.7e-113 415.6 1650 28.4
C07p53740 Brassica napus HOM05D004430 ORTHO05D005088 2.9e-113 414.8 1616 29.2
BolC7t45865H Brassica oleracea HOM05D004430 ORTHO05D005088 5.5e-112 410.6 1620 29.1
Thhalv10024214m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 7.2e-112 410.2 1636 30.9
CARHR232060 Cardamine hirsuta HOM05D004430 ORTHO05D005088 8.0e-111 406.8 1624 28.7
Thhalv10024213m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 4.4e-109 401.0 1657 29.5
Carub.0007s1638 Capsella rubella HOM05D004430 ORTHO05D005088 1.8e-107 395.6 1655 28.2
C01p20010 Brassica napus HOM05D004430 ORTHO05D005088 1.6e-106 392.5 1666 28.5
A01p16020 Brassica napus HOM05D004430 ORTHO05D005088 5.0e-105 387.5 1670 28.4
BraA01t01536Z Brassica rapa HOM05D004430 ORTHO05D005088 2.1e-103 382.1 1674 28.0
BolC1t01928H Brassica oleracea HOM05D004430 ORTHO05D005088 4.7e-103 380.9 1669 28.2
TAR622G0490 Trochodendron aralioides HOM05D004430 ORTHO05D005088 5.7e-101 374.0 1037 32.1
ATR0757G157 Amborella trichopoda HOM05D004430 ORTHO05D005088 2.2e-100 372.1 1695 28.3
BcaC06g32869 Brassica carinata HOM05D004430 ORTHO05D005088 3.7e-100 371.3 1631 27.7
Actinidia19112 Actinidia chinensis HOM05D004430 ORTHO05D005088 3.4e-93 348.2 324 63.0
BcaC09g50842 Brassica carinata HOM05D004430 ORTHO05D005088 2.2e-92 345.5 1626 27.0
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 6.4e-92 344.0 1583 29.6
MBI10_g44386_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 4.6e-90 337.8 1539 28.4
Actinidia33085 Actinidia chinensis HOM05D004430 ORTHO05D005088 1.8e-86 325.9 691 37.8
BcaB03g12441 Brassica carinata HOM05D004430 ORTHO05D005088 5.0e-81 307.8 1602 25.5
Actinidia19110 Actinidia chinensis HOM05D005107 ORTHO05D006200 4.0e-70 271.6 479 40.5
Haze_07543 Corylus avellana HOM05D004430 ORTHO05D005088 2.6e-69 268.9 1632 25.0
Cpa.g.sc153.6 Carica papaya HOM05D004430 ORTHO05D005088 5.8e-61 241.1 193 69.4
CDE06G0437 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 2.9e-60 238.8 457 39.6
Zm00001eb136860 Zea mays HOM05D004430 ORTHO05D005088 2.1e-55 222.6 1666 25.7
HPP92_006251 Vanilla planifolia HOM05D004430 ORTHO05D005088 2.0e-53 216.1 1414 25.8
MBI10_g44384_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 3.4e-53 215.3 200 63.0
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 6.4e-52 211.1 686 30.6
Actinidia19111 Actinidia chinensis HOM05D004430 ORTHO05D005088 1.4e-51 209.9 473 35.5
Zm00001eb028710 Zea mays HOM05D004430 ORTHO05D005088 1.4e-51 209.9 1543 26.6
SEGI_40513 Sequoiadendron giganteum HOM05D004430 ORTHO05D005088 1.1e-48 200.3 1515 25.9
HPP92_024337 Vanilla planifolia HOM05D004430 ORTHO05D005088 3.4e-45 188.7 1358 26.0
CDE02G0036 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 1.2e-42 180.3 249 47.0
Actinidia33086 Actinidia chinensis HOM05D004430 ORTHO05D005088 5.1e-41 174.9 389 35.0
HPP92_006241 Vanilla planifolia HOM05D004430 ORTHO05D005088 1.1e-38 167.2 220 52.3
Pp3c4_23740 Physcomitrium patens HOM05D004430 ORTHO05D005088 4.3e-24 118.6 1494 25.1
TAR622G0342 Trochodendron aralioides HOM05D004430 ORTHO05D005088 3.1e-22 112.5 78 71.8
HPP92_024330 Vanilla planifolia HOM05D004430 ORTHO05D005088 2.2e-20 106.3 1395 23.7
SMO174G0145 Selaginella moellendorffii HOM05D004430 ORTHO05D005088 1.9e-19 103.2 521 30.3
Psat2g086200 Pisum sativum HOM05D004430 ORTHO05D005088 3.2e-19 102.4 197 38.6
Mapoly0057s0099 Marchantia polymorpha HOM05D004430 ORTHO05D005088 4.7e-18 98.6 523 30.8
CBR_g19277 Chara braunii HOM05D004430 ORTHO05D005088 1.5e-16 93.6 526 30.6
Actinidia19337 Actinidia chinensis HOM05D004430 ORTHO05D005088 5.7e-16 91.7 123 43.1
Psat2g086240 Pisum sativum HOM05D004430 ORTHO05D005088 5.7e-16 91.7 216 35.2
TAR622G0951 Trochodendron aralioides HOM05D004430 ORTHO05D005088 9.7e-16 90.9 120 44.2
TAR629G1829 Trochodendron aralioides HOM05D003072 ORTHO05D008464 1.3e-15 90.5 222 34.2
Pp3c26_2670 Physcomitrium patens HOM05D004430 ORTHO05D005088 2.8e-15 89.4 232 37.1
Psat2g098600 Pisum sativum HOM05D003093 ORTHO05D005088 1.4e-14 87.0 181 38.7
Pp3c26_2830 Physcomitrium patens HOM05D004430 ORTHO05D005088 2.4e-14 86.3 508 27.4
AagrBONN_evm.TU.Sc2ySwM_344.4397 Anthoceros agrestis HOM05D004430 ORTHO05D005088 5.9e-13 81.6 472 28.8
Pp3c4_22960 Physcomitrium patens HOM05D004430 ORTHO05D005088 6.5e-12 78.2 1408 24.1
THA.LOC104822199 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 1.1e-06 60.8 135 33.3


User provided reference genes

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