Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 9.4e-163 577.0 340 100.0
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 1.1e-94 350.9 310 69.4
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 2.4e-94 349.7 316 67.4
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 5.8e-88 328.6 314 64.0
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 4.9e-87 325.5 309 65.4
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 8.4e-87 324.7 311 64.0
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 1.2e-85 320.9 311 64.0
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 1.2e-85 320.9 311 63.7
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 2.1e-85 320.1 309 69.6
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 2.1e-85 320.1 311 68.5
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 4.6e-85 318.9 311 62.1
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 4.6e-85 318.9 309 67.0
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 1.5e-83 313.9 330 59.4
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 1.9e-83 313.5 308 61.7
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.4e-80 302.8 311 60.1
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 6.5e-79 298.5 288 67.0
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 2.3e-76 290.0 311 59.2
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 3.0e-76 289.7 335 57.3
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 3.0e-76 289.7 311 59.8
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 5.1e-76 288.9 311 59.2
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 6.7e-76 288.5 310 59.4
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 6.7e-76 288.5 310 59.0
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 1.1e-75 287.7 307 58.6
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 1.9e-75 287.0 307 66.1
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 1.6e-74 283.9 311 57.6
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 2.2e-74 283.5 312 58.0
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 3.7e-74 282.7 309 58.3
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 3.7e-74 282.7 336 53.3
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 1.1e-73 281.2 317 56.5
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 1.4e-73 280.8 303 59.1
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 2.4e-73 280.0 311 56.3
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 2.4e-73 280.0 318 54.7
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 5.3e-73 278.9 304 59.9
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 6.9e-73 278.5 313 63.9
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.2e-72 277.7 312 56.4
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 2.0e-72 276.9 283 68.6
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 2.9e-71 273.1 294 55.1
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 3.8e-71 272.7 310 56.8
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 3.8e-71 272.7 318 53.5
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 5.0e-71 272.3 309 57.0
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 1.4e-70 270.8 318 61.6
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 1.4e-70 270.8 309 56.3
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 1.9e-70 270.4 334 54.8
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 2.5e-70 270.0 311 57.6
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 3.2e-70 269.6 314 57.6
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 9.4e-70 268.1 309 55.7
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.2e-69 267.7 308 55.8
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.2e-69 267.7 309 55.0
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 2.1e-69 266.9 316 52.5
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 1.0e-68 264.6 321 56.7
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 1.8e-68 263.8 287 59.2
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 3.0e-68 263.1 256 69.5
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 5.1e-68 262.3 300 55.7
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 5.1e-68 262.3 323 55.7
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.1e-67 261.2 317 56.5
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 1.1e-67 261.2 279 57.0
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 2.5e-67 260.0 311 50.8
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 2.5e-67 260.0 325 53.5
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 5.7e-67 258.8 280 58.6
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 1.7e-66 257.3 325 53.8
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 2.2e-66 256.9 310 56.5
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 2.2e-66 256.9 336 53.0
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 2.8e-66 256.5 294 54.4
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 6.3e-66 255.4 305 56.1
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 8.2e-66 255.0 312 54.2
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 1.1e-65 254.6 310 54.2
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.1e-65 254.6 310 52.9
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.4e-65 254.2 310 54.2
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 1.4e-65 254.2 294 57.8
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 1.4e-65 254.2 329 58.1
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.4e-65 253.4 310 54.2
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 2.4e-65 253.4 278 56.5
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 2.4e-65 253.4 313 55.9
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 1.2e-64 251.1 280 59.3
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 3.4e-64 249.6 278 55.8
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 3.4e-64 249.6 311 55.0
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 3.4e-64 249.6 302 52.0
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 1.0e-63 248.1 294 60.2
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 1.0e-63 248.1 299 51.2
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 1.3e-63 247.7 315 56.8
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 1.7e-63 247.3 310 50.0
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 2.9e-63 246.5 296 54.1
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 3.8e-63 246.1 316 55.7
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 5.0e-63 245.7 288 51.7
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 6.5e-63 245.4 332 46.7
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.1e-62 244.6 335 52.5
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 1.4e-62 244.2 327 48.3
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 2.5e-62 243.4 291 54.3
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 2.5e-62 243.4 327 48.3
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 3.2e-62 243.0 257 58.0
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 4.2e-62 242.7 253 66.4
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 4.2e-62 242.7 320 48.8
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 5.5e-62 242.3 310 52.6
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 9.4e-62 241.5 316 58.2
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 1.6e-61 240.7 269 53.2
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 1.8e-60 237.3 271 56.1
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 2.3e-60 236.9 316 48.4
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 2.3e-60 236.9 316 47.8
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.0e-60 236.5 288 51.0
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 2.0e-59 233.8 257 58.0
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 4.4e-59 232.6 329 45.6
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.7e-58 230.7 171 70.2
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.7e-58 230.7 330 45.2
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 3.7e-58 229.6 319 46.4
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 3.7e-58 229.6 327 45.9
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 3.7e-58 229.6 306 53.3
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 4.8e-58 229.2 300 50.3
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 6.3e-58 228.8 327 45.3
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 8.2e-58 228.4 279 49.1
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 8.2e-58 228.4 308 49.0
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 2.4e-57 226.9 315 46.3
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 1.2e-56 224.6 330 45.8
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 3.5e-56 223.0 316 47.5
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 4.5e-56 222.6 316 45.9
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 4.5e-56 222.6 316 45.9
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 4.5e-56 222.6 309 45.6
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 4.5e-56 222.6 277 51.6
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 5.9e-56 222.2 312 46.2
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 5.9e-56 222.2 313 48.9
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 1.3e-55 221.1 255 63.1
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 1.7e-55 220.7 312 46.2
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 2.9e-55 219.9 316 48.1
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 2.9e-55 219.9 284 47.2
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 3.2e-54 216.5 305 47.2
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 1.6e-53 214.2 285 47.0
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 2.7e-53 213.4 279 51.3
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 3.6e-53 213.0 300 46.3
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 3.6e-53 213.0 282 47.9
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 1.1e-51 208.0 272 50.0
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 3.7e-50 203.0 234 64.1
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.6e-48 197.6 254 55.5
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 7.7e-48 195.3 245 50.2
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.3e-47 194.5 172 59.9
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 1.9e-46 190.7 266 44.7
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.6e-45 187.6 194 59.8
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 3.1e-41 173.3 311 40.2
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 2.7e-40 170.2 285 41.4
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.2e-39 167.2 311 39.2
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 1.6e-37 161.0 269 39.8
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 2.7e-37 160.2 231 41.1
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 8.8e-36 155.2 198 56.1
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 2.6e-35 153.7 171 59.6
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 4.4e-35 152.9 267 39.7
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 8.3e-34 148.7 247 40.5
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 3.1e-33 146.7 159 55.3
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 4.3e-30 136.3 225 39.1
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.2e-29 134.8 234 38.0
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.2e-29 134.8 234 38.0
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 8.0e-29 132.1 184 42.4
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 1.8e-28 131.0 222 42.3
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.3e-28 130.6 211 40.3
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 8.9e-28 128.6 242 34.7
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.4e-27 126.7 147 46.3
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 7.5e-27 125.6 234 36.8
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 1.8e-25 120.9 233 36.5
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 9.2e-25 118.6 236 36.9
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.3e-23 114.0 108 58.3
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 1.1e-22 111.7 185 43.8
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 1.5e-19 101.3 197 48.7
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 2.0e-19 100.9 157 42.7
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 7.5e-19 99.0 111 56.8
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.7e-18 97.8 128 46.9
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 4.9e-18 96.3 131 48.1
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 1.1e-17 95.1 102 53.9
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 2.4e-17 94.0 58 79.3
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 1.2e-13 81.6 163 34.4
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 1.1e-12 78.6 89 51.7
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.3e-10 71.6 67 53.7
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 1.7e-10 71.2 122 43.4
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 3.7e-10 70.1 81 46.9
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 3.2e-09 67.0 131 38.2
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 1.2e-08 65.1 86 47.7


User provided reference genes

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