Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 8.2e-106 387.1 201 100.0
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 3.7e-50 202.2 152 68.4
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 2.4e-49 199.5 149 69.8
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 7.0e-49 198.0 136 72.1
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.2e-48 197.2 120 81.7
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.2e-48 197.2 120 81.7
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 1.6e-48 196.8 119 80.7
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 7.8e-48 194.5 152 69.7
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 7.8e-48 194.5 152 69.7
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 7.8e-48 194.5 136 75.7
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 7.8e-48 194.5 149 72.5
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 1.0e-47 194.1 118 82.2
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.3e-47 193.7 119 83.2
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.3e-47 193.0 152 69.1
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 3.0e-47 192.6 116 82.8
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 3.9e-47 192.2 143 69.2
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 3.9e-47 192.2 102 94.1
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 5.0e-47 191.8 117 80.3
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 5.0e-47 191.8 117 82.1
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 8.6e-47 191.0 130 75.4
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 8.6e-47 191.0 118 80.5
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.1e-46 190.7 109 85.3
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.1e-46 190.7 155 67.7
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.1e-46 190.7 125 80.0
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 1.5e-46 190.3 118 82.2
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.9e-46 189.9 124 75.0
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.9e-46 189.9 118 81.4
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 2.5e-46 189.5 162 64.2
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 2.5e-46 189.5 110 83.6
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 2.5e-46 189.5 116 79.3
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 3.3e-46 189.1 140 70.0
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 3.3e-46 189.1 112 83.0
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 4.3e-46 188.7 110 85.5
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 5.6e-46 188.3 161 62.7
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 5.6e-46 188.3 117 78.6
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 5.6e-46 188.3 128 75.0
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.6e-46 188.3 122 75.4
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 9.5e-46 187.6 135 68.1
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 9.5e-46 187.6 166 62.7
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 9.5e-46 187.6 125 76.8
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.2e-45 187.2 143 68.5
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 1.2e-45 187.2 163 60.7
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.6e-45 186.8 123 74.0
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 1.6e-45 186.8 132 73.5
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.6e-45 186.8 132 73.5
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.6e-45 186.8 132 73.5
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 2.1e-45 186.4 119 79.8
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 2.1e-45 186.4 110 82.7
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 2.8e-45 186.0 113 81.4
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.8e-45 186.0 128 77.3
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 2.8e-45 186.0 117 78.6
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 2.8e-45 186.0 119 76.5
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.8e-45 186.0 159 65.4
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 3.6e-45 185.7 133 72.2
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 3.6e-45 185.7 128 73.4
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 3.6e-45 185.7 119 79.0
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 3.6e-45 185.7 104 86.5
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 3.6e-45 185.7 137 70.8
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 4.7e-45 185.3 113 81.4
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 6.2e-45 184.9 113 80.5
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 6.2e-45 184.9 113 80.5
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 6.2e-45 184.9 113 80.5
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 6.2e-45 184.9 113 80.5
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 6.2e-45 184.9 116 77.6
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 8.0e-45 184.5 160 64.4
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 8.0e-45 184.5 113 80.5
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 1.1e-44 184.1 113 78.8
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 1.1e-44 184.1 107 83.2
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 1.1e-44 184.1 118 77.1
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.1e-44 184.1 102 87.3
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.4e-44 183.7 114 80.7
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.4e-44 183.7 121 76.9
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.4e-44 183.7 116 79.3
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 1.4e-44 183.7 128 73.4
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 2.3e-44 183.0 119 73.9
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 2.3e-44 183.0 119 73.9
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 2.3e-44 183.0 116 77.6
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 2.3e-44 183.0 118 76.3
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 3.1e-44 182.6 114 78.9
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 4.0e-44 182.2 136 69.9
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 4.0e-44 182.2 108 84.3
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 5.2e-44 181.8 167 61.7
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 5.2e-44 181.8 112 77.7
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 5.2e-44 181.8 127 73.2
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 6.8e-44 181.4 132 68.2
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 8.9e-44 181.0 118 77.1
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.5e-43 180.3 131 68.7
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.5e-43 180.3 113 77.0
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 2.6e-43 179.5 119 71.4
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 2.6e-43 179.5 127 72.4
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 2.6e-43 179.5 113 77.0
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 3.4e-43 179.1 114 75.4
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 9.8e-43 177.6 187 55.6
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.3e-42 177.2 131 67.2
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.9e-42 176.0 122 73.0
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 3.7e-42 175.6 119 75.6
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 5.4e-41 171.8 100 81.0
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 7.0e-41 171.4 130 66.9
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 1.6e-40 170.2 103 80.6
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 2.7e-40 169.5 112 76.8
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 3.5e-40 169.1 133 66.9
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 4.1e-33 145.6 90 77.8
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.2e-32 144.1 101 67.3
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 3.5e-32 142.5 111 63.1
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 4.6e-32 142.1 127 59.1
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 2.3e-31 139.8 99 66.7
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 9.5e-30 134.4 71 87.3
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.2e-28 128.6 74 81.1
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 6.8e-28 128.3 98 61.2
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 2.7e-24 116.3 63 87.3
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 5.3e-20 102.1 93 51.6
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 9.0e-20 101.3 56 87.5
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 1.6e-16 90.5 74 56.8
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 1.7e-15 87.0 44 90.9
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.3e-15 86.7 59 72.9
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.6e-13 79.3 64 60.9
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.5e-11 72.4 44 72.7
AUR62028714 Chenopodium quinoa HOM05D003967 ORTHO05D004531 1.9e-06 57.0 83 32.5
AUR62008132 Chenopodium quinoa HOM05D003967 ORTHO05D004531 4.3e-06 55.8 83 31.3


User provided reference genes

Program Settings