Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024660.1 Olea europaea HOM05D004884 ORTHO05D005873 2.1e-42 175.3 88 100.0
Oeu052257.1 Olea europaea HOM05D004884 ORTHO05D005873 1.2e-37 159.5 82 97.6
Cc04_g04240 Coffea canephora HOM05D004884 ORTHO05D005873 2.1e-37 158.7 82 96.3
Oeu045160.1 Olea europaea HOM05D004884 ORTHO05D005873 6.0e-37 157.1 82 95.1
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla HOM05D004884 ORTHO05D005873 7.9e-37 156.8 82 95.1
Atru.chr1.2995 Acer truncatum HOM05D004884 ORTHO05D005873 1.0e-36 156.4 82 93.9
Ciclev10026708m.g Citrus clementina HOM05D004884 ORTHO05D005873 1.0e-36 156.4 82 93.9
Dinv30589 Davidia involucrata HOM05D004884 ORTHO05D005873 1.0e-36 156.4 82 93.9
Gorai.011G082800 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.3e-36 156.0 82 92.7
MSTRG.9432 Avicennia marina HOM05D004884 ORTHO05D005873 1.8e-36 155.6 82 92.7
Gohir.A10G074700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.0e-36 154.8 82 91.5
Gohir.D10G076700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.0e-36 154.8 82 91.5
SalBow3G1656 Salvia bowleyana HOM05D004884 ORTHO05D005873 3.0e-36 154.8 82 92.7
SalBow6G6988 Salvia bowleyana HOM05D004884 ORTHO05D005873 3.0e-36 154.8 82 92.7
SGA_v2.0_scaffold117G32369 Striga asiatica HOM05D004884 ORTHO05D005873 3.0e-36 154.8 82 92.7
COL.COLO4_12946 Corchorus olitorius HOM05D004884 ORTHO05D005873 3.9e-36 154.5 82 90.2
Migut.D01065 Erythranthe guttata HOM05D004884 ORTHO05D005873 3.9e-36 154.5 82 92.7
vmacro20098 Vaccinium macrocarpon HOM05D004884 ORTHO05D005873 3.9e-36 154.5 82 91.5
Actinidia18100 Actinidia chinensis HOM05D004884 ORTHO05D005873 5.1e-36 154.1 82 92.7
CSS0003587 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 5.1e-36 154.1 82 92.7
Dinv38109 Davidia involucrata HOM05D000250 ORTHO05D002477 5.1e-36 154.1 82 91.5
Manes.04G114100 Manihot esculenta HOM05D004884 ORTHO05D005873 5.1e-36 154.1 82 91.5
Thecc.06G021400 Theobroma cacao HOM05D004884 ORTHO05D005873 6.7e-36 153.7 82 90.2
Duzib235G0621 Durio zibethinus HOM05D004884 ORTHO05D005873 8.7e-36 153.3 82 89.0
RcHm_v2.0_Chr2g0135941 Rosa chinensis HOM05D004884 ORTHO05D005873 1.1e-35 152.9 82 90.2
THA.LOC104808231 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 1.1e-35 152.9 82 90.2
Potri.001G193100 Populus trichocarpa HOM05D004884 ORTHO05D005873 1.5e-35 152.5 82 89.0
Rhsim10G0061400 Rhododendron simsii HOM05D004884 ORTHO05D005873 1.5e-35 152.5 82 90.2
Sabra01G0135700 Salix brachista HOM05D004884 ORTHO05D005873 1.5e-35 152.5 82 89.0
TWI75G0638 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 1.5e-35 152.5 82 89.0
ECA240G3509 Erigeron canadensis HOM05D004884 ORTHO05D005873 1.9e-35 152.1 82 91.5
MD17G1208900 Malus domestica HOM05D004884 ORTHO05D005873 1.9e-35 152.1 82 90.2
Nitab4.5_0001764g0110 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.9e-35 152.1 82 90.2
Nitab4.5_0013106g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.9e-35 152.1 82 90.2
GSVIVG01017313001 Vitis vinifera HOM05D004884 ORTHO05D005873 1.9e-35 152.1 82 91.5
Actinidia36285 Actinidia chinensis HOM05D004884 ORTHO05D005873 2.5e-35 151.8 81 92.6
Lalb_Chr22g0350881 Lupinus albus HOM05D004884 ORTHO05D005873 2.5e-35 151.8 82 89.0
PGR031G3479 Punica granatum HOM05D004884 ORTHO05D005873 2.5e-35 151.8 82 91.5
Glyma.07G031300 Glycine max HOM05D004884 ORTHO05D005873 3.3e-35 151.4 82 89.0
Glyma.08G211500 Glycine max HOM05D004884 ORTHO05D005873 3.3e-35 151.4 82 89.0
Lj3g0000080 Lotus japonicus HOM05D004884 ORTHO05D005873 3.3e-35 151.4 82 89.0
THA.LOC104812503 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 3.3e-35 151.4 82 87.8
VMungo0331G0880 Vigna mungo HOM05D004884 ORTHO05D005873 3.3e-35 151.4 82 89.0
Eucgr.F02527 Eucalyptus grandis HOM05D004884 ORTHO05D005873 4.3e-35 151.0 82 90.2
Psat5g301920 Pisum sativum HOM05D004884 ORTHO05D005873 4.3e-35 151.0 82 87.8
FvH4_6g29940 Fragaria vesca HOM05D004884 ORTHO05D005873 5.6e-35 150.6 82 89.0
FAN02G1988 Fragaria x ananassa HOM05D004884 ORTHO05D005873 5.6e-35 150.6 82 89.0
FAN05G0038 Fragaria x ananassa HOM05D004884 ORTHO05D005873 5.6e-35 150.6 82 89.0
FAN09G2574 Fragaria x ananassa HOM05D004884 ORTHO05D005873 5.6e-35 150.6 82 89.0
FAN14G1538 Fragaria x ananassa HOM05D004884 ORTHO05D005873 5.6e-35 150.6 82 89.0
Prupe.3G084300 Prunus persica HOM05D004884 ORTHO05D005873 5.6e-35 150.6 82 89.0
Lsat_1_v5_gn_1_2440 Lactuca sativa HOM05D004884 ORTHO05D005873 7.4e-35 150.2 82 90.2
Phvul.010G154800 Phaseolus vulgaris HOM05D004884 ORTHO05D005873 7.4e-35 150.2 82 87.8
unitig_747.g21296 Utricularia gibba HOM05D004884 ORTHO05D005873 7.4e-35 150.2 82 85.4
Peaxi162Scf00207g00728 Petunia axillaris HOM05D004884 ORTHO05D005873 9.6e-35 149.8 82 87.8
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea HOM05D004884 ORTHO05D005873 1.3e-34 149.4 82 87.8
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea HOM05D004884 ORTHO05D005873 1.3e-34 149.4 82 87.8
CAN.G407.94 Capsicum annuum HOM05D004884 ORTHO05D005873 1.3e-34 149.4 82 87.8
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 1.3e-34 149.4 82 90.2
QL05p029075 Quercus lobata HOM05D004884 ORTHO05D005873 1.6e-34 149.1 82 87.8
AL1G27470 Arabidopsis lyrata HOM05D004884 ORTHO05D005873 2.1e-34 148.7 82 86.6
AT1G15370 Arabidopsis thaliana HOM05D004884 ORTHO05D005873 2.1e-34 148.7 82 86.6
Lalb_Chr04g0262431 Lupinus albus HOM05D004884 ORTHO05D005873 2.1e-34 148.7 82 86.6
HanXRQChr02g0046821 Helianthus annuus HOM05D004884 ORTHO05D005873 2.8e-34 148.3 82 89.0
ClCG05G016940 Citrullus lanatus HOM05D004884 ORTHO05D005873 3.7e-34 147.9 82 87.8
MELO3C003694.2 Cucumis melo HOM05D004884 ORTHO05D005873 3.7e-34 147.9 82 87.8
Medtr2g103690 Medicago truncatula HOM05D004884 ORTHO05D005873 3.7e-34 147.9 82 86.6
Solyc06g068080.4 Solanum lycopersicum HOM05D004884 ORTHO05D005873 3.7e-34 147.9 82 87.8
Sopen06g025360 Solanum pennellii HOM05D004884 ORTHO05D005873 3.7e-34 147.9 82 87.8
PGSC0003DMG400028511 Solanum tuberosum HOM05D004884 ORTHO05D005873 3.7e-34 147.9 82 87.8
Carub.0001s1514 Capsella rubella HOM05D004884 ORTHO05D005873 4.8e-34 147.5 82 85.4
Cfa013154 Carpinus fangiana HOM05D004884 ORTHO05D005873 4.8e-34 147.5 82 86.6
PSO170G2441 Papaver somniferum HOM05D004884 ORTHO05D005873 4.8e-34 147.5 82 86.6
PSO455G0277 Papaver somniferum HOM05D004884 ORTHO05D005873 4.8e-34 147.5 82 86.6
CARHR015900 Cardamine hirsuta HOM05D004884 ORTHO05D005873 6.2e-34 147.1 82 85.4
Sopen03g035510 Solanum pennellii HOM05D004884 ORTHO05D005873 6.2e-34 147.1 82 85.4
CsaV3_3G046450 Cucumis sativus L. HOM05D004884 ORTHO05D005873 8.1e-34 146.7 82 86.6
Sed0027624 Sechium edule HOM05D004884 ORTHO05D005873 8.1e-34 146.7 82 86.6
Sc23g0006790 Simmondsia chinensis HOM05D004884 ORTHO05D005873 8.1e-34 146.7 81 87.7
CiPaw.08G011500 Carya illinoinensis HOM05D004884 ORTHO05D005873 1.1e-33 146.4 82 85.4
Solyc03g116600.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 1.4e-33 146.0 82 84.1
MBI04_g07835_MAGBIO Magnolia biondii HOM05D004884 ORTHO05D005873 2.4e-33 145.2 82 85.4
PGSC0003DMG400000635 Solanum tuberosum HOM05D004884 ORTHO05D005873 2.4e-33 145.2 82 84.1
Aqoxy1G02408 Aquilegia oxysepala HOM05D004884 ORTHO05D005873 3.1e-33 144.8 82 84.1
TAR636G0424 Trochodendron aralioides HOM05D004884 ORTHO05D005873 4.0e-33 144.4 82 82.9
Sed0022166 Sechium edule HOM05D004884 ORTHO05D005873 5.3e-33 144.1 82 85.4
EL10Ac2g04219 Beta vulgaris HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 81.7
BcaB03g14545 Brassica carinata HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
BcaC05g25475 Brassica carinata HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
BcaC05g25490 Brassica carinata HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
A06p11400 Brassica napus HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
A09p61460 Brassica napus HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
C05p13510 Brassica napus HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
C08p45030 Brassica napus HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
BolC5t30088H Brassica oleracea HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
BraA06t24317Z Brassica rapa HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
BraA09t41517Z Brassica rapa HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
Thhalv10009024m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
Sp1g13700 Schrenkiella parvula HOM05D004884 ORTHO05D005873 9.0e-33 143.3 82 84.1
Nn2g12037 Nelumbo nucifera HOM05D004884 ORTHO05D005873 1.2e-32 142.9 82 84.1
QL02p021869 Quercus lobata HOM05D004884 ORTHO05D005873 1.2e-32 142.9 82 82.9
Sabra06G0198100 Salix brachista HOM05D004884 ORTHO05D005873 1.2e-32 142.9 82 81.7
BcaC07g41506 Brassica carinata HOM05D004884 ORTHO05D005873 3.4e-32 141.4 82 82.9
BolC8t52049H Brassica oleracea HOM05D004884 ORTHO05D005873 3.4e-32 141.4 82 82.9
AUR62012381 Chenopodium quinoa HOM05D004884 ORTHO05D005873 4.5e-32 141.0 82 81.7
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 5.8e-32 140.6 82 81.7
Solyc11g008330.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 1.3e-31 139.4 81 82.7
TWI34G0752 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 1.3e-31 139.4 82 78.0
Peaxi162Scf00145g01210 Petunia axillaris HOM05D004884 ORTHO05D005873 1.7e-31 139.0 81 81.5
Thhalv10019295m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 2.2e-31 138.7 87 77.0
Gohir.D06G099800 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.1e-30 136.3 82 78.0
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 1.9e-30 135.6 82 76.8
Zm00001eb064920 Zea mays HOM05D004884 ORTHO05D005873 2.5e-30 135.2 82 78.0
Gorai.010G114700 Gossypium raimondii HOM05D004884 ORTHO05D005873 3.2e-30 134.8 82 76.8
EL10Ac9g22900 Beta vulgaris HOM05D004884 ORTHO05D005873 2.3e-28 128.6 82 75.6
Aa31LG4G430 Aethionema arabicum HOM05D004884 ORTHO05D005873 3.9e-28 127.9 69 88.4
AUR62012868 Chenopodium quinoa HOM05D004884 ORTHO05D005873 3.9e-28 127.9 81 74.1
SMO143G0054 Selaginella moellendorffii HOM05D004884 ORTHO05D005873 1.5e-27 125.9 81 70.4
Peaxi162Scf00332g00767 Petunia axillaris HOM05D004884 ORTHO05D005873 2.5e-27 125.2 64 92.2
Glyma.15G008700 Glycine max HOM05D004884 ORTHO05D005873 9.6e-27 123.2 64 90.6
BcaC07g41508 Brassica carinata HOM05D004884 ORTHO05D005873 1.6e-26 122.5 82 75.6
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 2.1e-26 122.1 78 74.4
CSS0011163 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 2.1e-26 122.1 65 89.2
AUR62031521 Chenopodium quinoa HOM05D004884 ORTHO05D005873 8.2e-26 120.2 132 51.5
Pp3c18_11860 Physcomitrium patens HOM05D004884 ORTHO05D005873 1.8e-25 119.0 82 65.9
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis HOM05D004884 ORTHO05D005873 2.6e-24 115.2 83 62.7
Nitab4.5_0000620g0040 Nicotiana tabacum HOM05D004884 ORTHO05D005873 2.9e-23 111.7 67 82.1
Mapoly0005s0226 Marchantia polymorpha HOM05D004884 ORTHO05D005873 1.4e-22 109.4 82 59.8
DCAR_015322 Daucus carota HOM05D004884 ORTHO05D005873 7.1e-22 107.1 58 89.7
Nitab4.5_0006187g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 4.6e-21 104.4 63 76.2
Hund04518 Selenicereus undatus HOM05D004884 ORTHO05D005873 1.8e-20 102.4 60 81.7
Potri.006G253700 Populus trichocarpa HOM05D004884 ORTHO05D005873 3.0e-20 101.7 82 64.6
CBR_g8585 Chara braunii HOM05D004884 ORTHO05D005873 1.9e-19 99.0 82 58.5
Nn8g39461 Nelumbo nucifera HOM05D004884 ORTHO05D005873 2.5e-19 98.6 63 73.0
Nitab4.5_0005235g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 2.5e-19 98.6 55 80.0
QL05p029040 Quercus lobata HOM05D004884 ORTHO05D005873 9.7e-19 96.7 68 70.6
CAN.G321.60 Capsicum annuum HOM05D004884 ORTHO05D005873 1.1e-17 93.2 54 75.9
TPR.G29435 Trifolium pratense HOM05D004884 ORTHO05D005873 7.7e-16 87.0 46 87.0
CAN.G185.10 Capsicum annuum HOM05D004884 ORTHO05D005873 1.1e-09 66.6 77 48.1
Haze_21525 Corylus avellana HOM05D004884 ORTHO05D005873 2.6e-08 62.0 84 47.6
Sopen11g004140 Solanum pennellii HOM05D004884 ORTHO05D005873 2.9e-07 58.5 81 48.1
Nitab4.5_0001450g0150 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.9e-06 55.8 37 67.6
Gohir.D07G161600 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.5e-06 55.5 82 43.9
Gorai.001G184900 Gossypium raimondii HOM05D004884 ORTHO05D005873 2.5e-06 55.5 82 43.9
Gohir.A06G098210 Gossypium hirsutum HOM05D004884 ORTHO05D005873 7.2e-06 53.9 33 75.8


User provided reference genes

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