Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 2.1e-177 625.5 316 100.0
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 1.6e-87 327.0 233 78.5
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 1.3e-70 270.8 151 92.7
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 1.5e-58 230.7 233 55.4
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 1.2e-55 221.1 230 56.5
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 3.3e-53 213.0 151 72.2
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 7.4e-53 211.8 151 71.5
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 7.4e-53 211.8 151 72.2
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 7.4e-53 211.8 233 53.2
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 1.3e-52 211.1 151 70.9
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 2.2e-52 210.3 151 70.2
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 6.3e-52 208.8 233 52.4
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 5.3e-51 205.7 198 61.6
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 5.3e-51 205.7 154 66.9
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 1.5e-50 204.1 227 51.5
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 1.5e-50 204.1 232 53.0
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 4.5e-50 202.6 149 67.8
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.3e-49 201.1 151 67.5
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 2.2e-49 200.3 149 69.1
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 5.0e-49 199.1 149 67.8
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 8.5e-49 198.4 224 51.8
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 9.4e-48 194.9 222 53.2
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 2.1e-47 193.7 152 66.4
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 4.6e-47 192.6 194 54.1
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 7.9e-47 191.8 149 65.8
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 7.9e-47 191.8 226 50.9
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 1.4e-46 191.0 154 62.3
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 2.3e-46 190.3 149 65.1
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 2.3e-46 190.3 180 57.8
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.1e-45 188.0 224 50.0
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 1.5e-45 187.6 225 47.1
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 2.5e-45 186.8 227 49.3
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 4.3e-45 186.0 149 63.8
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 5.7e-45 185.7 147 63.9
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 5.7e-45 185.7 149 63.8
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 5.7e-45 185.7 223 47.1
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 7.4e-45 185.3 230 49.1
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.3e-44 184.5 149 61.7
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 1.7e-44 184.1 149 61.7
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 2.8e-44 183.3 226 46.9
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 3.7e-44 183.0 149 62.4
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 3.7e-44 183.0 197 53.3
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 4.8e-44 182.6 198 52.5
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 6.3e-44 182.2 149 61.1
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 8.2e-44 181.8 149 61.7
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 8.2e-44 181.8 149 61.7
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 8.2e-44 181.8 225 46.2
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.4e-43 181.0 149 61.1
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.4e-43 181.0 149 61.1
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 1.4e-43 181.0 149 61.1
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 1.4e-43 181.0 120 73.3
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 1.4e-43 181.0 149 61.7
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 1.8e-43 180.6 149 59.7
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 2.4e-43 180.3 149 61.7
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 3.1e-43 179.9 226 46.9
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 3.1e-43 179.9 149 63.1
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.1e-43 179.9 149 60.4
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 4.1e-43 179.5 149 61.1
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 4.1e-43 179.5 149 61.7
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 5.3e-43 179.1 149 58.4
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 9.1e-43 178.3 149 59.7
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 9.1e-43 178.3 149 59.7
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 1.5e-42 177.6 149 59.7
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.5e-42 177.6 223 45.3
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 2.6e-42 176.8 148 61.5
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 4.5e-42 176.0 199 51.8
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 4.5e-42 176.0 149 61.1
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 4.5e-42 176.0 149 59.7
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 5.9e-42 175.6 197 51.3
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 5.9e-42 175.6 226 46.0
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 1.0e-41 174.9 149 58.4
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 2.2e-41 173.7 219 46.1
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 3.8e-41 172.9 149 61.7
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 5.0e-41 172.6 150 62.0
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 6.5e-41 172.2 149 61.1
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 2.5e-40 170.2 149 58.4
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 3.2e-40 169.9 223 45.7
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 5.5e-40 169.1 150 58.7
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 7.2e-40 168.7 149 57.0
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 9.4e-40 168.3 208 49.0
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 1.2e-39 167.9 150 58.0
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 2.7e-39 166.8 149 55.7
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 4.7e-39 166.0 149 55.0
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 4.7e-39 166.0 156 56.4
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 6.1e-39 165.6 225 45.3
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 7.9e-39 165.2 149 57.0
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 1.8e-38 164.1 149 54.4
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 2.3e-38 163.7 149 57.7
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 3.0e-38 163.3 214 45.3
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 3.0e-38 163.3 226 43.8
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 3.9e-38 162.9 149 59.1
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 5.1e-38 162.5 149 58.4
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 8.8e-38 161.8 172 51.7
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 1.1e-37 161.4 149 55.7
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 1.5e-37 161.0 129 65.1
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 2.6e-37 160.2 149 55.0
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 7.4e-37 158.7 224 46.0
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 2.8e-36 156.8 153 56.2
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 2.8e-36 156.8 171 49.7
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 4.8e-36 156.0 215 47.4
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 4.8e-36 156.0 149 53.7
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 8.2e-36 155.2 138 56.5
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.1e-35 154.8 228 44.3
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 1.4e-35 154.5 171 49.1
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.8e-35 154.1 120 63.3
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 2.4e-35 153.7 194 46.9
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 2.4e-35 153.7 194 46.9
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 2.4e-35 153.7 165 50.3
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 5.3e-35 152.5 270 39.3
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 1.2e-34 151.4 194 46.4
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 1.5e-34 151.0 123 61.8
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 2.0e-34 150.6 151 50.3
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 2.0e-34 150.6 119 63.0
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 4.5e-34 149.4 149 53.7
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 4.5e-34 149.4 149 53.7
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 5.9e-34 149.1 149 53.7
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 5.9e-34 149.1 149 53.7
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 7.7e-34 148.7 129 56.6
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.0e-33 148.3 156 52.6
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.3e-33 147.9 154 50.6
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 5.0e-33 146.0 149 51.0
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.1e-32 144.8 167 49.7
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 5.5e-32 142.5 150 52.7
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 2.8e-28 130.2 150 48.0
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 6.3e-28 129.0 118 56.8
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 1.1e-27 128.3 152 47.4
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 7.7e-26 122.1 165 46.1
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 2.9e-25 120.2 148 46.6
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 3.8e-25 119.8 173 43.4
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 3.4e-21 106.7 205 39.0
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 1.7e-20 104.4 76 67.1
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 2.8e-20 103.6 149 43.0
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 6.3e-20 102.4 169 37.9
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 1.4e-19 101.3 170 37.6
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 5.9e-18 95.9 147 39.5
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 1.7e-17 94.4 152 38.8
Oeu006898.1 Olea europaea HOM05D000080 ORTHO05D024817 3.2e-16 90.1 51 82.4
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 7.2e-16 89.0 150 39.3
Oeu049426.1 Olea europaea HOM05D012831 ORTHO05D000053 5.7e-13 79.3 51 72.5
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 2.8e-12 77.0 81 48.1
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 1.4e-11 74.7 108 43.5
Oeu059953.1 Olea europaea HOM05D007843 ORTHO05D003639 7.0e-11 72.4 39 82.1
Oeu046960.1 Olea europaea HOM05D012831 ORTHO05D001038 4.5e-10 69.7 41 75.6
CBR_g74690 Chara braunii HOM05D004951 ORTHO05D005840 1.4e-06 58.2 122 30.3


User provided reference genes

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