Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024503.1 Olea europaea HOM05D007032 ORTHO05D008777 4.1e-142 508.1 257 100.0
CSS0032159 Camellia sinensis var. sinensis HOM05D007032 ORTHO05D008777 4.7e-74 282.0 206 73.3
Dinv37016 Davidia involucrata HOM05D007032 ORTHO05D008777 2.0e-72 276.6 206 72.3
Sopen10g029210 Solanum pennellii HOM05D007032 ORTHO05D008777 1.3e-71 273.9 206 68.9
Solyc10g078560.3 Solanum lycopersicum HOM05D007032 ORTHO05D008777 8.4e-71 271.2 206 68.9
PGSC0003DMG400008355 Solanum tuberosum HOM05D007032 ORTHO05D008777 1.1e-70 270.8 205 68.8
Cc06_g22990 Coffea canephora HOM05D007032 ORTHO05D008777 1.4e-70 270.4 202 68.8
Nitab4.5_0002769g0070 Nicotiana tabacum HOM05D007032 ORTHO05D008777 6.0e-69 265.0 214 67.3
CAN.G960.47 Capsicum annuum HOM05D007032 ORTHO05D008777 1.9e-67 260.0 208 67.3
Actinidia17303 Actinidia chinensis HOM05D007032 ORTHO05D008777 3.3e-67 259.2 206 68.4
MSTRG.26067 Avicennia marina HOM05D007032 ORTHO05D008777 2.8e-66 256.1 205 66.8
GSVIVG01033405001 Vitis vinifera HOM05D007032 ORTHO05D008777 3.6e-66 255.8 210 65.7
Cfa016444 Carpinus fangiana HOM05D007032 ORTHO05D008777 1.1e-65 254.2 205 66.3
Manes.09G141200 Manihot esculenta HOM05D007032 ORTHO05D008777 1.4e-65 253.8 207 62.8
vmacro09138 Vaccinium macrocarpon HOM05D007032 ORTHO05D008777 1.8e-65 253.4 209 64.6
Prupe.7G004300 Prunus persica HOM05D007032 ORTHO05D008777 2.4e-65 253.1 206 65.5
Haze_19421 Corylus avellana HOM05D007032 ORTHO05D008777 4.0e-65 252.3 205 66.3
Nitab4.5_0004844g0030 Nicotiana tabacum HOM05D007032 ORTHO05D008777 8.9e-65 251.1 214 63.1
COL.COLO4_13594 Corchorus olitorius HOM05D007032 ORTHO05D008777 1.2e-64 250.8 206 63.6
PGR142G4364 Punica granatum HOM05D007032 ORTHO05D008777 1.2e-64 250.8 208 64.9
SalBow1G8415 Salvia bowleyana HOM05D007032 ORTHO05D008777 2.6e-64 249.6 201 65.2
QL07p019479 Quercus lobata HOM05D007032 ORTHO05D008777 5.8e-64 248.4 204 66.2
DCAR_017051 Daucus carota HOM05D007032 ORTHO05D008777 7.6e-64 248.1 202 65.3
MD12G1003800 Malus domestica HOM05D007032 ORTHO05D008777 7.6e-64 248.1 206 64.1
Peaxi162Scf00463g00017 Petunia axillaris HOM05D007032 ORTHO05D008777 7.6e-64 248.1 207 62.8
TAR623G0513 Trochodendron aralioides HOM05D007032 ORTHO05D008777 2.2e-63 246.5 209 62.7
RcHm_v2.0_Chr3g0497071 Rosa chinensis HOM05D007032 ORTHO05D008777 1.4e-62 243.8 204 63.7
Thecc.05G294800 Theobroma cacao HOM05D007032 ORTHO05D008777 1.9e-62 243.4 207 62.8
Duzib177G0078 Durio zibethinus HOM05D007032 ORTHO05D008777 3.2e-62 242.7 207 64.7
Duzib177G0665 Durio zibethinus HOM05D007032 ORTHO05D008777 3.2e-62 242.7 207 64.7
Eucgr.K01499 Eucalyptus grandis HOM05D007032 ORTHO05D008777 1.2e-61 240.7 206 63.6
Migut.K00006 Erythranthe guttata HOM05D007032 ORTHO05D008777 6.0e-61 238.4 204 65.7
FAN28G1183 Fragaria x ananassa HOM05D007032 ORTHO05D008777 1.0e-60 237.7 204 61.8
Cpa.g.sc51.117 Carica papaya HOM05D007032 ORTHO05D008777 1.7e-60 236.9 207 63.8
Glyma.19G112100 Glycine max HOM05D007032 ORTHO05D008777 8.7e-60 234.6 204 61.8
Ca_08264_v3 Cicer arietinum L. HOM05D007032 ORTHO05D008777 1.1e-59 234.2 202 60.9
Lj1g0006283 Lotus japonicus HOM05D007032 ORTHO05D008777 1.1e-59 234.2 209 62.2
VMungo1383G0477 Vigna mungo HOM05D007032 ORTHO05D008777 1.5e-59 233.8 199 63.3
FAN26G0126 Fragaria x ananassa HOM05D007032 ORTHO05D008777 1.9e-59 233.4 208 60.6
CiPaw.10G001100 Carya illinoinensis HOM05D007032 ORTHO05D008777 7.3e-59 231.5 208 60.1
Phvul.001G110800 Phaseolus vulgaris HOM05D007032 ORTHO05D008777 7.3e-59 231.5 199 62.3
TPR.G5887 Trifolium pratense HOM05D007032 ORTHO05D008777 7.3e-59 231.5 202 60.9
FvH4_1g28130 Fragaria vesca HOM05D007032 ORTHO05D008777 1.6e-58 230.3 203 60.6
FAN19G2553 Fragaria x ananassa HOM05D007032 ORTHO05D008777 8.1e-58 228.0 207 59.4
Gohir.D13G177900 Gossypium hirsutum HOM05D007032 ORTHO05D008777 8.1e-58 228.0 207 59.4
Medtr7g085600 Medicago truncatula HOM05D007032 ORTHO05D008777 8.1e-58 228.0 202 58.9
Atru.chr2.1383 Acer truncatum HOM05D007032 ORTHO05D008777 1.1e-57 227.6 205 60.5
arahy.Tifrunner.gnm1.ann1.U2PEBB Arachis hypogaea HOM05D007032 ORTHO05D008777 1.1e-57 227.6 202 60.4
SGA_v2.0_scaffold94G28401 Striga asiatica HOM05D007032 ORTHO05D008777 1.4e-57 227.3 206 58.7
Gohir.A13G172000 Gossypium hirsutum HOM05D007032 ORTHO05D008777 2.4e-57 226.5 207 59.4
Sc23g0006440 Simmondsia chinensis HOM05D007032 ORTHO05D008777 3.1e-57 226.1 207 57.0
Lalb_Chr22g0359131 Lupinus albus HOM05D007032 ORTHO05D008777 4.0e-57 225.7 205 59.0
Sabra13G0051600 Salix brachista HOM05D007032 ORTHO05D008777 4.0e-57 225.7 206 58.7
MELO3C026886.2 Cucumis melo HOM05D007032 ORTHO05D008777 1.2e-56 224.2 202 59.4
Sabra19G0042800 Salix brachista HOM05D007032 ORTHO05D008777 1.5e-56 223.8 238 55.5
TWI34G0430 Tripterygium wilfordii HOM05D007032 ORTHO05D008777 1.5e-56 223.8 207 59.4
Potri.013G058100 Populus trichocarpa HOM05D007032 ORTHO05D008777 2.0e-56 223.4 206 59.7
ECA233G0049 Erigeron canadensis HOM05D007032 ORTHO05D008777 2.6e-56 223.0 209 58.9
CANSAT78G2258 Cannabis sativa HOM05D007032 ORTHO05D008777 3.4e-56 222.6 202 58.9
ClCG10G013370 Citrullus lanatus HOM05D007032 ORTHO05D008777 5.8e-56 221.9 203 59.1
CsaV3_3G043260 Cucumis sativus L. HOM05D007032 ORTHO05D008777 1.3e-55 220.7 202 57.9
Potri.019G035100 Populus trichocarpa HOM05D007032 ORTHO05D008777 1.7e-55 220.3 206 58.7
Aqoxy1G00484 Aquilegia oxysepala HOM05D007032 ORTHO05D008777 8.4e-55 218.0 207 54.1
Gorai.013G203200 Gossypium raimondii HOM05D007032 ORTHO05D008777 3.2e-54 216.1 207 57.5
Ciclev10021147m.g Citrus clementina HOM05D007032 ORTHO05D008777 9.3e-54 214.5 205 55.6
Psat0s1971g0040 Pisum sativum HOM05D007032 ORTHO05D008777 9.3e-54 214.5 201 57.7
Nn7g35853 Nelumbo nucifera HOM05D007032 ORTHO05D008777 1.6e-53 213.8 207 59.9
MBI04_g38346_MAGBIO Magnolia biondii HOM05D007032 ORTHO05D008777 1.0e-52 211.1 204 55.9
Sed0015080 Sechium edule HOM05D007032 ORTHO05D008777 1.1e-51 207.6 207 55.6
THA.LOC104820772 Tarenaya hassleriana HOM05D007032 ORTHO05D008777 2.5e-51 206.5 206 55.3
Lsat_1_v5_gn_6_37021 Lactuca sativa HOM05D007032 ORTHO05D008777 4.3e-51 205.7 207 56.0
arahy.Tifrunner.gnm1.ann1.TEV0AS Arachis hypogaea HOM05D007032 ORTHO05D008777 1.4e-49 200.7 186 58.1
Actinidia38613 Actinidia chinensis HOM05D007032 ORTHO05D008777 1.5e-48 197.2 169 63.9
CDE10G0774 Ceratophyllum demersum HOM05D007032 ORTHO05D008777 5.8e-48 195.3 207 52.2
AUR62032696 Chenopodium quinoa HOM05D007032 ORTHO05D008777 9.9e-48 194.5 210 51.9
Carub.0006s1643 Capsella rubella HOM05D007032 ORTHO05D008777 2.2e-47 193.4 207 53.1
Sp6g26170 Schrenkiella parvula HOM05D007032 ORTHO05D008777 3.8e-47 192.6 209 54.1
AT5G18140 Arabidopsis thaliana HOM05D007032 ORTHO05D008777 3.2e-46 189.5 206 51.5
EL10Ac3g06823 Beta vulgaris HOM05D007032 ORTHO05D008777 3.2e-46 189.5 207 53.6
PSO339G2173 Papaver somniferum HOM05D007032 ORTHO05D008777 4.2e-46 189.1 208 52.4
Thhalv10014046m.g Eutrema salsugineum HOM05D007032 ORTHO05D008777 9.3e-46 188.0 210 52.4
BolC9t58727H Brassica oleracea HOM05D007032 ORTHO05D008777 1.6e-45 187.2 206 53.4
AL6G29340 Arabidopsis lyrata HOM05D007032 ORTHO05D008777 2.1e-45 186.8 200 53.0
BcaB08g36702 Brassica carinata HOM05D007032 ORTHO05D008777 7.9e-45 184.9 207 55.6
Ah.04g153180 Amaranthus hybridus HOM05D002059 ORTHO05D002210 2.3e-44 183.3 208 50.0
A10p21360 Brassica napus HOM05D007032 ORTHO05D008777 3.0e-44 183.0 205 52.2
BraA10t44199Z Brassica rapa HOM05D007032 ORTHO05D008777 3.0e-44 183.0 205 52.2
C09p58830 Brassica napus HOM05D007032 ORTHO05D008777 1.5e-43 180.6 210 51.0
Aa31LG11G11460 Aethionema arabicum HOM05D007032 ORTHO05D008777 4.3e-43 179.1 198 50.5
Sabra19G0045100 Salix brachista HOM05D007032 ORTHO05D008777 5.6e-43 178.7 222 49.5
HanXRQChr02g0054241 Helianthus annuus HOM05D007032 ORTHO05D008777 9.6e-43 177.9 203 51.7
CARHR194930 Cardamine hirsuta HOM05D007032 ORTHO05D008777 1.3e-42 177.6 208 51.4
ATR0737G130 Amborella trichopoda HOM05D007032 ORTHO05D008777 1.0e-36 157.9 207 44.9
HPP92_018484 Vanilla planifolia HOM05D007032 ORTHO05D008777 6.9e-33 145.2 203 44.3
CDE10G1270 Ceratophyllum demersum HOM05D007032 ORTHO05D008777 3.4e-32 142.9 100 70.0
HPP92_018478 Vanilla planifolia HOM05D007032 ORTHO05D008777 3.4e-32 142.9 203 43.8
Atru.chr2.1387 Acer truncatum HOM05D007032 ORTHO05D008777 1.0e-28 131.3 143 51.0
SEGI_34502 Sequoiadendron giganteum HOM05D007032 ORTHO05D008777 1.5e-24 117.5 205 36.1
Nitab4.5_0000394g0040 Nicotiana tabacum HOM05D007032 ORTHO05D008777 1.4e-20 104.4 102 59.8
Nitab4.5_0000626g0040 Nicotiana tabacum HOM05D007032 ORTHO05D008777 3.7e-10 69.7 131 38.2
Nitab4.5_0000394g0030 Nicotiana tabacum HOM05D007032 ORTHO05D008777 1.2e-08 64.7 66 42.4


User provided reference genes

Program Settings