Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 6.8e-170 600.5 292 100.0
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 8.3e-83 311.2 293 60.4
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 2.0e-81 306.6 236 68.2
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.0e-80 304.3 245 66.1
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 2.3e-80 303.1 292 58.2
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 2.3e-80 303.1 237 66.7
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 3.8e-80 302.4 271 59.4
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 3.8e-80 302.4 271 59.4
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.5e-79 300.4 301 58.8
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 4.3e-79 298.9 297 56.9
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 9.5e-79 297.7 241 65.1
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 2.8e-78 296.2 280 58.6
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.6e-78 295.8 289 57.4
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 6.1e-78 295.0 291 57.4
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 6.1e-78 295.0 291 57.4
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 8.0e-78 294.7 298 56.7
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 8.0e-78 294.7 252 62.3
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.0e-77 294.3 280 60.0
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 1.0e-77 294.3 275 58.5
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 1.4e-77 293.9 246 63.4
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.8e-77 293.5 264 61.0
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 2.3e-77 293.1 302 55.6
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 2.3e-77 293.1 295 56.9
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 5.2e-77 292.0 262 61.1
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 1.5e-76 290.4 275 58.5
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 2.0e-76 290.0 276 58.0
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 4.4e-76 288.9 296 56.1
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 5.7e-76 288.5 281 58.0
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 7.5e-76 288.1 280 57.1
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 7.5e-76 288.1 236 64.0
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 9.8e-76 287.7 262 58.8
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 1.3e-75 287.3 289 57.1
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.3e-75 287.3 229 65.5
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 2.2e-75 286.6 293 57.7
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 2.2e-75 286.6 245 60.8
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 2.2e-75 286.6 291 55.0
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 3.7e-75 285.8 227 64.8
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 4.9e-75 285.4 289 55.0
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 8.3e-75 284.6 265 59.6
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 1.1e-74 284.3 228 64.9
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.8e-74 283.5 276 56.2
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.8e-74 283.5 229 65.1
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.4e-74 283.1 293 54.3
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 2.4e-74 283.1 295 54.6
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 5.4e-74 282.0 277 59.9
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 7.0e-74 281.6 233 63.9
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 7.0e-74 281.6 278 56.5
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 7.0e-74 281.6 294 54.8
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 7.0e-74 281.6 278 56.1
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 7.0e-74 281.6 277 59.2
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 3.5e-73 279.3 286 58.4
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.3e-72 277.3 289 54.7
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.7e-72 276.9 287 54.0
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 1.7e-72 276.9 289 57.1
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 3.9e-72 275.8 268 56.7
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 5.0e-72 275.4 263 57.0
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 6.6e-72 275.0 230 61.7
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.5e-71 273.1 296 53.7
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 2.5e-71 273.1 228 63.2
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 3.3e-71 272.7 290 52.4
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 1.2e-70 270.8 270 54.4
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 2.1e-70 270.0 288 53.5
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 2.1e-70 270.0 303 53.1
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 2.8e-70 269.6 262 57.6
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 6.2e-70 268.5 230 60.4
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.0e-69 267.7 291 53.3
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 1.8e-69 266.9 290 51.0
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 5.2e-69 265.4 273 54.9
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 6.8e-69 265.0 229 60.3
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 6.8e-69 265.0 290 50.3
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 8.9e-69 264.6 290 52.4
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 1.5e-68 263.8 248 56.5
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 2.0e-68 263.5 290 51.0
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 4.4e-68 262.3 291 53.6
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 9.8e-68 261.2 291 50.2
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 9.8e-68 261.2 291 50.2
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 1.7e-67 260.4 234 58.5
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 2.2e-67 260.0 282 53.2
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 2.9e-67 259.6 290 51.4
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 1.4e-66 257.3 227 60.4
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 2.3e-64 250.0 278 50.4
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 3.0e-64 249.6 386 42.5
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.5e-63 247.3 285 51.6
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 4.3e-63 245.7 275 53.5
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 7.3e-63 245.0 245 53.5
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 7.3e-63 245.0 228 56.6
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.6e-62 243.8 228 56.6
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.3e-61 240.0 285 50.5
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 6.8e-61 238.4 231 55.8
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.9e-58 230.3 281 48.4
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 7.1e-58 228.4 201 59.2
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.5e-57 226.1 203 60.1
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 5.6e-55 218.8 240 50.8
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.1e-54 214.9 199 58.8
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 1.2e-52 211.1 199 56.3
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 4.6e-49 199.1 142 70.4
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 4.7e-46 189.1 244 49.2
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 2.9e-43 179.9 204 49.0
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 4.9e-43 179.1 286 41.3
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.7e-40 170.6 94 81.9
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 9.6e-39 164.9 198 49.5
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 2.8e-38 163.3 250 44.0
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 9.9e-36 154.8 194 49.0
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.7e-35 154.1 124 63.7
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 4.2e-34 149.4 97 74.2
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.8e-32 144.1 73 89.0
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.4e-29 134.4 114 64.9
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 1.9e-26 124.0 237 39.2
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 2.4e-26 123.6 115 60.0
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 8.7e-24 115.2 174 43.7
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.2e-18 96.7 57 75.4
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 6.9e-13 79.0 242 31.0
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 2.2e-11 73.9 115 42.6
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 4.6e-09 66.2 78 48.7
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-08 65.1 49 65.3


User provided reference genes

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