Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024482.1 Olea europaea HOM05D004474 ORTHO05D005538 2.0e-71 272.3 138 100.0
Oeu024481.1 Olea europaea HOM05D004474 ORTHO05D005538 3.6e-68 261.5 135 97.0
Migut.J01832 Erythranthe guttata HOM05D004474 ORTHO05D005538 4.1e-56 221.5 131 84.0
Dinv14299 Davidia involucrata HOM05D004474 ORTHO05D005538 4.5e-55 218.0 135 79.3
Dinv24073 Davidia involucrata HOM05D004474 ORTHO05D005538 5.9e-55 217.6 135 80.0
QL07p023712 Quercus lobata HOM05D004474 ORTHO05D005538 5.9e-55 217.6 135 80.0
MSTRG.10843 Avicennia marina HOM05D004474 ORTHO05D005538 1.7e-54 216.1 135 80.0
Cfa020166 Carpinus fangiana HOM05D004474 ORTHO05D005538 3.8e-54 214.9 135 77.8
Manes.09G035300 Manihot esculenta HOM05D004474 ORTHO05D005538 3.8e-54 214.9 135 78.5
SalBow1G5519 Salvia bowleyana HOM05D004474 ORTHO05D005538 3.8e-54 214.9 131 82.4
Haze_19989 Corylus avellana HOM05D004474 ORTHO05D005538 5.0e-54 214.5 134 79.1
Ciclev10012319m.g Citrus clementina HOM05D004474 ORTHO05D005538 8.5e-54 213.8 136 77.9
CiPaw.10G026600 Carya illinoinensis HOM05D004474 ORTHO05D005538 1.1e-53 213.4 131 80.2
Haze_19987 Corylus avellana HOM05D004474 ORTHO05D005538 1.5e-53 213.0 135 77.0
FvH4_6g22380 Fragaria vesca HOM05D004474 ORTHO05D005538 1.5e-53 213.0 136 77.2
FAN05G0702 Fragaria x ananassa HOM05D004474 ORTHO05D005538 2.5e-53 212.2 136 77.2
Atru.chr8.1110 Acer truncatum HOM05D004474 ORTHO05D005538 3.2e-53 211.8 135 76.3
Glyma.02G173600 Glycine max HOM05D004474 ORTHO05D005538 4.2e-53 211.5 131 80.9
Hma1.2p1_0676F.1_g201960 Hydrangea macrophylla HOM05D004474 ORTHO05D005538 4.2e-53 211.5 131 77.9
Cpa.g.sc85.68 Carica papaya HOM05D004474 ORTHO05D005538 1.2e-52 209.9 136 74.3
Oeu033737.2 Olea europaea HOM05D004474 ORTHO05D005538 1.6e-52 209.5 131 78.6
Prupe.7G076700 Prunus persica HOM05D004474 ORTHO05D005538 1.6e-52 209.5 136 75.0
Aa31LG1G24090 Aethionema arabicum HOM05D004474 ORTHO05D005538 3.6e-52 208.4 131 76.3
arahy.Tifrunner.gnm1.ann1.I8NV4T Arachis hypogaea HOM05D004474 ORTHO05D005538 4.7e-52 208.0 131 77.9
arahy.Tifrunner.gnm1.ann1.Q7TVYL Arachis hypogaea HOM05D004474 ORTHO05D005538 4.7e-52 208.0 131 77.9
CiPaw.09G030400 Carya illinoinensis HOM05D004474 ORTHO05D005538 4.7e-52 208.0 135 75.6
Glyma.09G111700 Glycine max HOM05D004474 ORTHO05D005538 4.7e-52 208.0 131 79.4
Oeu034264.1 Olea europaea HOM05D004474 ORTHO05D005538 6.1e-52 207.6 136 80.1
unitig_749.g14029 Utricularia gibba HOM05D004474 ORTHO05D005538 6.1e-52 207.6 134 76.9
SGA_v2.0_scaffold274G46485 Striga asiatica HOM05D004474 ORTHO05D005538 8.0e-52 207.2 135 77.0
SGA_v2.0_scaffold105G30490 Striga asiatica HOM05D004474 ORTHO05D005538 1.4e-51 206.5 133 76.7
PGR004G1518 Punica granatum HOM05D004474 ORTHO05D005538 1.8e-51 206.1 136 73.5
Phvul.007G259700 Phaseolus vulgaris HOM05D004474 ORTHO05D005538 2.3e-51 205.7 131 77.9
VMungo0720G2191 Vigna mungo HOM05D004474 ORTHO05D005538 3.0e-51 205.3 131 78.6
MD12G1057400 Malus domestica HOM05D004474 ORTHO05D005538 3.9e-51 204.9 136 73.5
Actinidia38580 Actinidia chinensis HOM05D004474 ORTHO05D005538 5.2e-51 204.5 136 72.8
CSS0036713 Camellia sinensis var. sinensis HOM05D004474 ORTHO05D005538 8.8e-51 203.8 132 74.2
MD14G1058000 Malus domestica HOM05D004474 ORTHO05D005538 8.8e-51 203.8 136 73.5
CANSAT64G2813 Cannabis sativa HOM05D004474 ORTHO05D005538 1.1e-50 203.4 137 73.0
Lsat_1_v5_gn_8_75341 Lactuca sativa HOM05D004474 ORTHO05D005538 2.0e-50 202.6 136 75.0
Potri.016G045900 Populus trichocarpa HOM05D004474 ORTHO05D005538 2.0e-50 202.6 136 75.0
COL.COLO4_33985 Corchorus olitorius HOM05D004474 ORTHO05D005538 3.3e-50 201.8 132 74.2
DCAR_013545 Daucus carota HOM05D004474 ORTHO05D005538 4.4e-50 201.4 135 72.6
ECA236G1848 Erigeron canadensis HOM05D004474 ORTHO05D005538 4.4e-50 201.4 136 73.5
Lalb_Chr21g0316311 Lupinus albus HOM05D004474 ORTHO05D005538 4.4e-50 201.4 131 75.6
RcHm_v2.0_Chr3g0479711 Rosa chinensis HOM05D004474 ORTHO05D005538 4.4e-50 201.4 133 73.7
AT2G42130 Arabidopsis thaliana HOM05D004474 ORTHO05D005538 9.7e-50 200.3 131 74.8
MELO3C009628.2 Cucumis melo HOM05D004474 ORTHO05D005538 9.7e-50 200.3 131 77.1
THA.LOC104802541 Tarenaya hassleriana HOM05D004474 ORTHO05D005538 9.7e-50 200.3 131 74.8
MBI04_g33963_MAGBIO Magnolia biondii HOM05D004474 ORTHO05D005538 1.3e-49 199.9 135 73.3
Rhsim04G0096800 Rhododendron simsii HOM05D004474 ORTHO05D005538 1.3e-49 199.9 143 70.6
RhsimUnG0212600 Rhododendron simsii HOM05D004474 ORTHO05D005538 1.3e-49 199.9 143 70.6
HanXRQChr06g0176171 Helianthus annuus HOM05D004474 ORTHO05D005538 1.7e-49 199.5 132 75.8
CsaV3_3G038850 Cucumis sativus L. HOM05D004474 ORTHO05D005538 2.8e-49 198.7 131 77.1
Sed0015879 Sechium edule HOM05D004474 ORTHO05D005538 2.8e-49 198.7 131 75.6
Gohir.A09G128000 Gossypium hirsutum HOM05D004474 ORTHO05D005538 3.7e-49 198.4 136 72.1
Gohir.D09G124000 Gossypium hirsutum HOM05D004474 ORTHO05D005538 3.7e-49 198.4 136 72.1
Gorai.006G142800 Gossypium raimondii HOM05D004474 ORTHO05D005538 3.7e-49 198.4 136 72.1
Potri.006G192200 Populus trichocarpa HOM05D004474 ORTHO05D005538 6.3e-49 197.6 135 71.9
AL4G40500 Arabidopsis lyrata HOM05D004474 ORTHO05D005538 8.2e-49 197.2 131 73.3
Carub.0004s2447 Capsella rubella HOM05D004474 ORTHO05D005538 8.2e-49 197.2 131 73.3
Thhalv10017981m.g Eutrema salsugineum HOM05D004474 ORTHO05D005538 8.2e-49 197.2 131 73.3
Nn2g15677 Nelumbo nucifera HOM05D004474 ORTHO05D005538 1.1e-48 196.8 135 69.6
Duzib093G0660 Durio zibethinus HOM05D004474 ORTHO05D005538 1.4e-48 196.4 136 72.1
Thhalv10006122m.g Eutrema salsugineum HOM05D004474 ORTHO05D005538 1.8e-48 196.1 131 71.0
ClCG10G017510 Citrullus lanatus HOM05D004474 ORTHO05D005538 2.4e-48 195.7 131 75.6
TAR636G3262 Trochodendron aralioides HOM05D004474 ORTHO05D005538 2.4e-48 195.7 135 71.1
CARHR137190 Cardamine hirsuta HOM05D004474 ORTHO05D005538 3.1e-48 195.3 131 71.8
Sp5g04710 Schrenkiella parvula HOM05D004474 ORTHO05D005538 3.1e-48 195.3 131 71.0
Thecc.05G171200 Theobroma cacao HOM05D004474 ORTHO05D005538 3.1e-48 195.3 132 72.7
TAR633G0920 Trochodendron aralioides HOM05D004474 ORTHO05D005538 3.1e-48 195.3 136 69.9
CAN.G570.5 Capsicum annuum HOM05D004474 ORTHO05D005538 4.1e-48 194.9 135 70.4
C04p03280 Brassica napus HOM05D004474 ORTHO05D005538 7.0e-48 194.1 131 71.8
HanXRQChr05g0132931 Helianthus annuus HOM05D004474 ORTHO05D005538 7.0e-48 194.1 136 72.8
Solyc03g062790.3 Solanum lycopersicum HOM05D004474 ORTHO05D005538 7.0e-48 194.1 135 69.6
Sopen03g015120 Solanum pennellii HOM05D004474 ORTHO05D005538 1.2e-47 193.4 135 68.9
Lj5g0007104 Lotus japonicus HOM05D004474 ORTHO05D005538 1.6e-47 193.0 128 75.0
Sabra16G0050000 Salix brachista HOM05D004474 ORTHO05D005538 1.6e-47 193.0 158 65.2
Sp4g24340 Schrenkiella parvula HOM05D004474 ORTHO05D005538 1.6e-47 193.0 131 71.8
TPR.G40276 Trifolium pratense HOM05D004474 ORTHO05D005538 1.6e-47 193.0 131 74.8
BcaB02g08282 Brassica carinata HOM05D004474 ORTHO05D005538 2.0e-47 192.6 131 69.5
PSO384G2014 Papaver somniferum HOM05D004474 ORTHO05D005538 2.0e-47 192.6 135 69.6
Aa31LG10G12710 Aethionema arabicum HOM05D004474 ORTHO05D005538 2.6e-47 192.2 131 71.8
BcaC02g12461 Brassica carinata HOM05D004474 ORTHO05D005538 3.5e-47 191.8 129 71.3
A05p02740 Brassica napus HOM05D004474 ORTHO05D005538 3.5e-47 191.8 129 71.3
BolC4t21967H Brassica oleracea HOM05D004474 ORTHO05D005538 3.5e-47 191.8 129 71.3
BraA05t19266Z Brassica rapa HOM05D004474 ORTHO05D005538 3.5e-47 191.8 129 71.3
Peaxi162Scf00258g00522 Petunia axillaris HOM05D004474 ORTHO05D005538 3.5e-47 191.8 135 71.1
Zm00001eb067150 Zea mays HOM05D004474 ORTHO05D005538 4.5e-47 191.4 133 70.7
BcaNung04406 Brassica carinata HOM05D004474 ORTHO05D005538 5.9e-47 191.0 131 71.8
Medtr1g054070 Medicago truncatula HOM05D004474 ORTHO05D005538 5.9e-47 191.0 128 75.0
PSO339G4529 Papaver somniferum HOM05D004474 ORTHO05D005538 5.9e-47 191.0 135 68.9
AL5G39660 Arabidopsis lyrata HOM05D004474 ORTHO05D005538 1.3e-46 189.9 131 69.5
Hund24791 Selenicereus undatus HOM05D004474 ORTHO05D005538 1.7e-46 189.5 131 71.8
EL10Ac3g06918 Beta vulgaris HOM05D004474 ORTHO05D005538 2.2e-46 189.1 136 69.1
Ca_12079_v3 Cicer arietinum L. HOM05D004474 ORTHO05D005538 2.9e-46 188.7 128 73.4
A04p02790 Brassica napus HOM05D004474 ORTHO05D005538 3.8e-46 188.3 132 69.7
CARHR168330 Cardamine hirsuta HOM05D004474 ORTHO05D005538 5.0e-46 188.0 131 67.9
BcaC02g09981 Brassica carinata HOM05D004474 ORTHO05D005538 6.5e-46 187.6 132 68.9
BolC4t24999H Brassica oleracea HOM05D004474 ORTHO05D005538 6.5e-46 187.6 132 68.9
BraA04t16003Z Brassica rapa HOM05D004474 ORTHO05D005538 6.5e-46 187.6 132 68.9
GSVIVG01033499001 Vitis vinifera HOM05D004474 ORTHO05D005538 6.5e-46 187.6 115 79.1
AT3G58010 Arabidopsis thaliana HOM05D004474 ORTHO05D005538 1.1e-45 186.8 131 67.9
Nitab4.5_0002488g0030 Nicotiana tabacum HOM05D004474 ORTHO05D005538 1.1e-45 186.8 137 69.3
Carub.0005s2485 Capsella rubella HOM05D004474 ORTHO05D005538 1.5e-45 186.4 135 65.9
Cc06_g15950 Coffea canephora HOM05D004474 ORTHO05D005538 1.9e-45 186.0 119 74.8
Sopen10g031040 Solanum pennellii HOM05D004474 ORTHO05D005538 2.5e-45 185.7 136 66.9
C04p34370 Brassica napus HOM05D004474 ORTHO05D005538 4.2e-45 184.9 132 68.2
Sabra06G0147300 Salix brachista HOM05D004474 ORTHO05D005538 4.2e-45 184.9 129 69.8
Solyc10g080490.2 Solanum lycopersicum HOM05D004474 ORTHO05D005538 1.2e-44 183.3 136 66.2
Actinidia17270 Actinidia chinensis HOM05D004474 ORTHO05D005538 2.7e-44 182.2 142 66.2
Aqoxy2G00079 Aquilegia oxysepala HOM05D004474 ORTHO05D005538 2.7e-44 182.2 135 66.7
PGSC0003DMG401023672 Solanum tuberosum HOM05D004474 ORTHO05D005538 2.7e-44 182.2 133 66.2
Psat0s4417g0040 Pisum sativum HOM05D004474 ORTHO05D005538 4.7e-44 181.4 131 71.0
Nitab4.5_0007056g0010 Nicotiana tabacum HOM05D004474 ORTHO05D005538 2.3e-43 179.1 155 60.6
vmacro09118 Vaccinium macrocarpon HOM05D004474 ORTHO05D005538 8.8e-43 177.2 196 52.0
Peaxi162Scf00480g00018 Petunia axillaris HOM05D004474 ORTHO05D005538 4.4e-42 174.9 137 65.0
Sc13g0002280 Simmondsia chinensis HOM05D004474 ORTHO05D005538 7.5e-42 174.1 115 72.2
Ah.04g152460 Amaranthus hybridus HOM05D004474 ORTHO05D005538 2.4e-40 169.1 136 64.7
Manes.08G044700 Manihot esculenta HOM05D004474 ORTHO05D005538 3.1e-40 168.7 129 62.8
Hund19202 Selenicereus undatus HOM05D004474 ORTHO05D005538 4.1e-40 168.3 146 60.3
THA.LOC104819884 Tarenaya hassleriana HOM05D004474 ORTHO05D005538 7.0e-40 167.5 128 65.6
Nitab4.5_0003600g0060 Nicotiana tabacum HOM05D004474 ORTHO05D005538 1.6e-39 166.4 130 63.8
Lj2A366T55 Lonicera japonica HOM05D004474 ORTHO05D005538 1.0e-38 163.7 109 71.6
TWI74G1538 Tripterygium wilfordii HOM05D004474 ORTHO05D005538 2.9e-38 162.2 98 78.6
Zm00001eb433050 Zea mays HOM05D004474 ORTHO05D005538 4.2e-37 158.3 118 63.6
BcaB08g34564 Brassica carinata HOM05D004474 ORTHO05D005538 1.0e-35 153.7 127 60.6
Eucgr.A02451 Eucalyptus grandis HOM05D004474 ORTHO05D005538 1.8e-35 152.9 130 58.5
FAN02G3755 Fragaria x ananassa HOM05D004474 ORTHO05D005538 4.0e-35 151.8 145 58.6
FAN14G3363 Fragaria x ananassa HOM05D004474 ORTHO05D005538 1.5e-34 149.8 156 56.4
ATR0605G151 Amborella trichopoda HOM05D004474 ORTHO05D005538 2.0e-34 149.4 124 58.9
FAN09G2770 Fragaria x ananassa HOM05D004474 ORTHO05D005538 4.4e-34 148.3 155 55.5
CDE02G4436 Ceratophyllum demersum HOM05D004474 ORTHO05D005538 1.1e-32 143.7 136 56.6
AUR62012033 Chenopodium quinoa HOM05D004474 ORTHO05D005538 9.1e-32 140.6 98 72.4
Mapoly0020s0060 Marchantia polymorpha HOM05D004474 ORTHO05D005538 2.5e-29 132.5 133 52.6
Pp3c10_14100 Physcomitrium patens HOM05D004474 ORTHO05D005538 2.1e-28 129.4 120 53.3
Nitab4.5_0000324g0040 Nicotiana tabacum HOM05D004474 ORTHO05D005538 4.7e-28 128.3 93 65.6
CBR_g20312 Chara braunii HOM05D004474 ORTHO05D005538 5.2e-27 124.8 130 49.2
Mapoly0033s0063 Marchantia polymorpha HOM05D004474 ORTHO05D005538 2.2e-25 119.4 123 48.0
BcaB04g18512 Brassica carinata HOM05D004474 ORTHO05D005538 3.9e-22 108.6 132 45.5
Os04g0665800 Oryza sativa ssp. japonica HOM05D004474 ORTHO05D005538 3.9e-22 108.6 63 82.5
SMO351G0571 Selaginella moellendorffii HOM05D004474 ORTHO05D005538 6.6e-22 107.8 135 43.0
AUR62015371 Chenopodium quinoa HOM05D004474 ORTHO05D005538 3.4e-18 95.5 81 66.7
CAN.G128.40 Capsicum annuum HOM05D004474 ORTHO05D005538 1.2e-15 87.0 104 48.1
Oeu054954.1 Olea europaea HOM05D004474 ORTHO05D005538 3.0e-14 82.4 52 75.0
HPP92_002995 Vanilla planifolia HOM05D004474 ORTHO05D005538 4.3e-13 78.6 58 60.3
AagrBONN_evm.TU.Sc2ySwM_228.3345 Anthoceros agrestis HOM05D004474 ORTHO05D005538 4.0e-11 72.0 71 47.9
Oeu030335.1 Olea europaea HOM05D004474 ORTHO05D289960 3.9e-06 55.5 73 45.2


User provided reference genes

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