Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 3.7e-180 634.8 329 100.0
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 6.9e-179 630.6 329 99.4
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 5.6e-120 434.9 335 73.7
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 2.1e-119 433.0 335 73.4
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 1.8e-62 243.8 434 41.2
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 1.8e-54 217.2 398 42.2
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 2.9e-52 209.9 423 40.9
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 5.5e-51 205.7 397 41.8
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 1.4e-49 201.1 403 37.7
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 3.0e-49 199.9 397 39.5
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 7.5e-48 195.3 435 39.1
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 1.5e-43 181.0 374 40.9
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 1.2e-42 177.9 382 39.8
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 1.1e-38 164.9 294 41.5
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.1e-38 164.9 398 37.2
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 3.1e-38 163.3 407 37.6
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.0e-37 160.6 390 36.7
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 4.5e-37 159.5 411 34.3
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 5.9e-37 159.1 414 39.1
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 7.7e-37 158.7 387 39.0
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 1.3e-36 157.9 409 35.9
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 1.7e-36 157.5 409 37.2
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 3.8e-36 156.4 418 38.5
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 3.8e-36 156.4 382 36.6
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 8.6e-36 155.2 417 38.6
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 3.3e-35 153.3 428 36.2
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 9.5e-35 151.8 418 38.5
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 9.5e-35 151.8 426 38.5
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 1.2e-34 151.4 442 35.5
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 1.6e-34 151.0 389 35.5
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.1e-34 150.6 398 36.9
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 2.1e-34 150.6 455 31.2
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 3.0e-33 146.7 354 35.3
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 2.0e-32 144.1 419 32.7
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 2.6e-32 143.7 435 34.3
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 3.4e-32 143.3 288 39.2
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 1.3e-31 141.4 413 33.7
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.3e-31 141.4 441 34.5
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 6.3e-31 139.0 437 36.2
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 6.3e-31 139.0 453 31.8
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 6.3e-31 139.0 428 34.3
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 4.1e-30 136.3 450 30.4
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 9.2e-30 135.2 369 35.8
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 9.2e-30 135.2 337 38.3
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.6e-29 134.4 455 31.0
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.7e-29 133.7 369 35.5
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 2.7e-29 133.7 388 34.3
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 2.9e-28 130.2 428 33.6
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 1.5e-27 127.9 456 31.6
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 1.5e-27 127.9 460 32.4
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 5.6e-27 125.9 371 34.8
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 4.7e-26 122.9 349 33.0
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 6.1e-26 122.5 397 31.7
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 4.0e-25 119.8 380 32.1
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 6.8e-25 119.0 489 31.1
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 8.9e-25 118.6 426 32.2
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 3.4e-24 116.7 419 29.4
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 9.8e-24 115.2 357 33.6
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 2.2e-23 114.0 427 32.3
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 6.4e-23 112.5 464 29.3
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 8.3e-23 112.1 408 30.9
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 2.4e-22 110.5 475 31.8
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 9.2e-22 108.6 434 29.3
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 1.6e-21 107.8 447 28.6
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 2.7e-21 107.1 336 30.7
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 6.0e-21 105.9 413 31.2
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 6.0e-21 105.9 411 31.9
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 6.0e-21 105.9 401 33.4
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 1.3e-20 104.8 449 31.0
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.7e-20 104.4 451 27.5
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.7e-20 104.4 375 34.7
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 2.3e-20 104.0 419 31.0
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 3.9e-20 103.2 471 28.9
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 3.9e-20 103.2 438 31.5
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 5.0e-20 102.8 289 33.9
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 6.6e-20 102.4 428 27.6
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 8.6e-20 102.1 447 30.4
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 8.6e-20 102.1 450 28.9
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 3.3e-19 100.1 410 31.2
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 3.3e-19 100.1 417 29.0
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 7.3e-19 99.0 409 30.6
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 7.3e-19 99.0 397 30.0
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 9.5e-19 98.6 467 26.8
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 9.5e-19 98.6 463 26.1
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 1.6e-18 97.8 421 29.0
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 4.7e-18 96.3 451 26.8
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 4.7e-18 96.3 468 26.5
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 4.7e-18 96.3 453 28.3
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 6.2e-18 95.9 412 30.3
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 6.2e-18 95.9 412 30.3
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 8.0e-18 95.5 412 30.3
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 1.1e-17 95.1 416 31.2
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.4e-17 94.7 448 27.0
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.1e-17 93.6 451 26.8
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 3.1e-17 93.6 378 30.4
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 5.2e-17 92.8 425 30.8
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 8.9e-17 92.0 435 31.7
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 2.0e-16 90.9 474 27.2
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.0e-16 90.9 460 28.0
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 4.4e-16 89.7 332 29.2
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 4.4e-16 89.7 451 28.6
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 1.3e-15 88.2 436 27.5
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 1.3e-15 88.2 492 27.6
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 2.9e-15 87.0 442 26.7
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 3.7e-15 86.7 471 28.7
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 6.4e-15 85.9 479 25.9
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 1.9e-14 84.3 397 29.5
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 1.9e-14 84.3 397 29.5
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 4.1e-14 83.2 363 31.1
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 7.0e-14 82.4 437 30.0
AUR62017299 Chenopodium quinoa HOM05D002977 ORTHO05D003225 7.0e-14 82.4 329 31.6
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 9.2e-14 82.0 353 26.6
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.2e-13 81.6 468 27.4
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.6e-13 81.3 183 41.5
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 1.6e-13 81.3 385 27.8
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.6e-13 81.3 398 27.1
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.1e-13 80.9 479 27.8
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 3.5e-13 80.1 480 25.4
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 4.6e-13 79.7 410 26.8
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 4.6e-13 79.7 399 28.3
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 1.0e-12 78.6 363 31.1
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.0e-12 78.6 498 25.3
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.3e-12 78.2 453 28.7
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.7e-12 77.8 483 26.3
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.7e-12 77.8 399 27.8
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 1.7e-12 77.8 435 28.5
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 5.1e-12 76.3 278 34.5
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 5.1e-12 76.3 433 27.3
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 5.1e-12 76.3 442 26.9
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 5.1e-12 76.3 425 27.8
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 1.9e-11 74.3 342 33.9
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 2.5e-11 73.9 438 29.2
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.5e-11 73.9 389 25.4
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.5e-11 73.9 389 25.4
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 2.5e-11 73.9 446 25.1
TPR.G37675 Trifolium pratense HOM05D002977 ORTHO05D003225 3.3e-11 73.6 432 25.7
Lalb_Chr05g0225091 Lupinus albus HOM05D002977 ORTHO05D003225 4.3e-11 73.2 430 24.0
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 5.6e-11 72.8 430 29.8
Sed0021237 Sechium edule HOM05D002977 ORTHO05D003225 1.2e-10 71.6 301 33.2
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 2.1e-10 70.9 354 28.5
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 3.6e-10 70.1 355 29.6
Lj4g0001816 Lotus japonicus HOM05D002977 ORTHO05D003225 3.6e-10 70.1 428 27.3
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 3.6e-10 70.1 404 25.5
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 4.7e-10 69.7 266 34.6
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 8.1e-10 68.9 466 27.7
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 1.1e-09 68.6 425 26.4
Ah.16g108930 Amaranthus hybridus HOM05D002977 ORTHO05D003225 2.3e-09 67.4 363 28.1
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 4.0e-09 66.6 471 27.2
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 5.2e-09 66.2 461 25.2
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 6.8e-09 65.9 484 25.2
Ciclev10023936m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.5e-08 64.7 230 32.2
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 1.5e-08 64.7 469 25.2
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 2.6e-08 63.9 221 30.8
Ah.12g057650 Amaranthus hybridus HOM05D002977 ORTHO05D003225 4.4e-08 63.2 403 26.6
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 4.4e-08 63.2 440 26.1
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 9.9e-08 62.0 494 25.9
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 2.9e-07 60.5 304 31.9
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 3.7e-07 60.1 418 26.3
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 6.4e-07 59.3 491 23.6
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.1e-06 58.5 202 28.7
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 3.2e-06 57.0 452 25.2
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 4.1e-06 56.6 209 29.2
CARHR230080 Cardamine hirsuta HOM05D002977 ORTHO05D003225 9.2e-06 55.5 397 25.2


User provided reference genes

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