Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 1.1e-179 633.3 329 100.0
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 1.5e-178 629.4 329 99.4
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 1.1e-120 437.2 335 74.3
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 4.3e-120 435.3 335 74.0
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 8.2e-63 245.0 434 41.5
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 8.2e-55 218.4 398 42.5
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 4.5e-53 212.6 423 41.4
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 2.5e-51 206.8 399 41.9
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 6.1e-50 202.2 403 38.0
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 1.0e-49 201.4 399 39.6
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.5e-48 197.6 435 39.5
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 6.5e-44 182.2 374 41.2
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 1.9e-43 180.6 382 40.3
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.7e-39 167.5 398 37.7
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 2.8e-39 166.8 294 41.8
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 6.3e-39 165.6 407 38.1
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 7.0e-38 162.2 390 36.9
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.2e-37 161.4 414 39.6
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 3.5e-37 159.8 370 41.4
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 3.5e-37 159.8 409 37.7
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 4.5e-37 159.5 411 34.3
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 7.7e-37 158.7 418 39.0
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 7.7e-37 158.7 409 36.2
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 7.7e-37 158.7 382 37.2
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.7e-36 157.5 417 39.1
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 5.0e-36 156.0 428 36.7
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 1.9e-35 154.1 418 39.0
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.9e-35 154.1 426 39.0
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 2.5e-35 153.7 389 36.0
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 2.5e-35 153.7 442 36.0
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 4.2e-35 152.9 455 31.6
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 9.5e-35 151.8 398 37.2
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 1.4e-33 147.9 354 35.9
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 4.0e-33 146.4 435 34.7
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 8.9e-33 145.2 422 32.9
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 8.9e-33 145.2 288 39.6
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 2.6e-32 143.7 441 34.9
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 4.4e-32 142.9 413 33.9
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.3e-31 141.4 437 36.6
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 1.3e-31 141.4 428 34.8
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 3.7e-31 139.8 453 32.0
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 8.3e-31 138.7 450 30.9
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 5.4e-30 136.0 388 34.8
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 7.0e-30 135.6 337 38.6
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 4.5e-29 132.9 455 31.0
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 5.9e-29 132.5 428 34.1
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 7.8e-29 132.1 369 35.8
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.3e-28 130.6 369 35.5
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 2.9e-28 130.2 460 32.8
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 1.1e-27 128.3 456 31.4
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 1.6e-26 124.4 348 33.0
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 3.6e-26 123.2 397 32.0
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 6.1e-26 122.5 371 34.8
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 2.3e-25 120.6 426 32.4
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 4.0e-25 119.8 488 31.6
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 5.2e-25 119.4 380 32.1
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 6.8e-25 119.0 419 29.8
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 3.4e-24 116.7 357 33.9
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 9.8e-24 115.2 427 32.6
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 3.7e-23 113.2 464 29.5
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 4.9e-23 112.8 475 32.2
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 8.3e-23 112.1 408 31.9
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 1.4e-22 111.3 434 29.7
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 2.4e-22 110.5 447 29.1
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 9.2e-22 108.6 413 31.7
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 1.2e-21 108.2 411 32.4
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 1.6e-21 107.8 336 30.7
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 1.6e-21 107.8 401 33.7
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 2.7e-21 107.1 449 31.4
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 3.5e-21 106.7 375 35.2
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 6.0e-21 105.9 438 32.0
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 1.3e-20 104.8 448 31.2
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 1.7e-20 104.4 471 29.1
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.0e-20 103.6 451 27.5
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 5.0e-20 102.8 289 34.3
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 5.0e-20 102.8 450 29.1
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 1.1e-19 101.7 428 27.6
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 1.1e-19 101.7 419 31.0
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 1.5e-19 101.3 467 27.2
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 1.9e-19 100.9 463 26.6
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 2.5e-19 100.5 417 29.3
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 3.3e-19 100.1 409 30.8
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 3.3e-19 100.1 397 30.2
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 4.3e-19 99.8 410 31.5
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 1.2e-18 98.2 412 30.8
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 1.2e-18 98.2 412 30.8
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 1.2e-18 98.2 475 27.4
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 1.2e-18 98.2 421 29.9
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 1.6e-18 97.8 412 30.8
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 2.1e-18 97.4 468 26.7
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 2.1e-18 97.4 453 28.5
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 2.8e-18 97.1 414 31.4
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 8.0e-18 95.5 451 26.8
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 8.0e-18 95.5 448 27.2
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 1.4e-17 94.7 435 32.2
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 5.2e-17 92.8 425 31.1
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 5.2e-17 92.8 451 26.8
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 6.8e-17 92.4 378 30.4
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 1.2e-16 91.7 474 27.4
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.2e-16 91.7 460 28.3
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.6e-16 90.5 451 28.8
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 5.8e-16 89.4 332 29.2
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 7.5e-16 89.0 492 27.8
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 1.3e-15 88.2 442 26.9
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 2.2e-15 87.4 436 27.5
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 2.2e-15 87.4 471 28.9
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 2.9e-15 87.0 479 26.1
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 8.3e-15 85.5 397 29.7
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 8.3e-15 85.5 397 29.7
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 1.4e-14 84.7 437 30.4
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 4.1e-14 83.2 479 28.2
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 4.1e-14 83.2 477 26.8
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 5.4e-14 82.8 353 26.6
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 7.0e-14 82.4 468 27.6
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 9.2e-14 82.0 363 31.1
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.2e-13 81.6 183 42.1
AUR62017299 Chenopodium quinoa HOM05D002977 ORTHO05D003225 1.2e-13 81.6 329 31.6
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 2.1e-13 80.9 480 25.6
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 2.7e-13 80.5 385 27.8
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 2.7e-13 80.5 399 28.6
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 2.7e-13 80.5 435 29.0
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 4.6e-13 79.7 458 24.0
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 4.6e-13 79.7 484 26.4
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 4.6e-13 79.7 498 26.1
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 7.8e-13 79.0 453 28.9
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.0e-12 78.6 433 27.7
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.0e-12 78.6 399 28.1
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 1.0e-12 78.6 425 28.2
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 1.3e-12 78.2 278 34.9
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.3e-12 78.2 398 27.1
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 1.7e-12 77.8 442 27.1
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 2.3e-12 77.4 363 31.1
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 3.0e-12 77.0 342 34.5
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 3.9e-12 76.6 438 29.7
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 8.6e-12 75.5 430 30.2
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 8.6e-12 75.5 490 28.0
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 1.5e-11 74.7 446 25.3
Lalb_Chr05g0225091 Lupinus albus HOM05D002977 ORTHO05D003225 1.9e-11 74.3 430 24.2
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.5e-11 73.9 389 25.4
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.5e-11 73.9 389 25.4
TPR.G37675 Trifolium pratense HOM05D002977 ORTHO05D003225 5.6e-11 72.8 432 25.7
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 9.5e-11 72.0 266 35.3
Sed0021237 Sechium edule HOM05D002977 ORTHO05D003225 9.5e-11 72.0 301 33.2
Lj4g0001816 Lotus japonicus HOM05D002977 ORTHO05D003225 1.2e-10 71.6 429 28.4
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 2.1e-10 70.9 404 25.7
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 2.8e-10 70.5 325 31.7
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 2.8e-10 70.5 425 26.8
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 3.6e-10 70.1 357 28.9
Ah.16g108930 Amaranthus hybridus HOM05D002977 ORTHO05D003225 4.7e-10 69.7 363 28.7
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 6.2e-10 69.3 458 24.2
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 1.4e-09 68.2 466 27.7
Glyma.17G132000 Glycine max HOM05D002977 ORTHO05D003225 1.4e-09 68.2 454 25.8
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 1.8e-09 67.8 471 27.4
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 2.3e-09 67.4 461 25.4
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 3.1e-09 67.0 484 25.4
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 6.8e-09 65.9 221 31.2
Ciclev10023936m.g Citrus clementina HOM05D002977 ORTHO05D003225 6.8e-09 65.9 245 31.8
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 6.8e-09 65.9 469 25.4
GSVIVG01019863001 Vitis vinifera HOM05D002977 ORTHO05D003225 6.8e-09 65.9 189 40.2
Ah.12g057650 Amaranthus hybridus HOM05D002977 ORTHO05D003225 8.9e-09 65.5 406 27.1
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 2.0e-08 64.3 440 26.4
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 4.4e-08 63.2 494 26.1
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.7e-07 61.2 304 32.2
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 2.2e-07 60.8 418 26.6
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 2.9e-07 60.5 203 30.0
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.9e-07 60.5 491 23.8
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 4.9e-07 59.7 451 24.4
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 1.4e-06 58.2 452 25.4
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 2.4e-06 57.4 207 29.5
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 3.2e-06 57.0 437 25.9
CARHR230080 Cardamine hirsuta HOM05D002977 ORTHO05D003225 4.1e-06 56.6 397 25.4
CDE11G0380 Ceratophyllum demersum HOM05D055600 ORTHO05D003225 7.1e-06 55.8 199 26.1


User provided reference genes

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