Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 4.3e-186 654.4 313 100.0
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 3.6e-132 475.3 294 77.6
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 1.0e-126 457.2 299 74.9
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.7e-126 456.4 294 76.2
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.7e-126 456.4 295 74.6
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 2.2e-126 456.1 295 74.6
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 3.8e-126 455.3 294 74.8
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.8e-126 455.3 292 76.0
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 5.0e-126 454.9 291 77.0
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 6.5e-126 454.5 294 75.9
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 1.1e-125 453.8 292 76.0
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.4e-125 453.4 291 75.6
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.4e-125 453.4 291 75.6
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.4e-125 453.4 291 75.6
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.9e-125 453.0 292 75.0
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 1.9e-125 453.0 295 73.9
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 2.5e-125 452.6 293 75.8
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 4.2e-125 451.8 261 82.8
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.2e-124 450.3 292 75.0
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 1.6e-124 449.9 295 75.6
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 2.1e-124 449.5 295 73.2
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 2.1e-124 449.5 295 74.6
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 2.7e-124 449.1 294 74.5
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 6.1e-124 448.0 288 75.0
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.8e-123 446.4 295 72.9
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 1.8e-123 446.4 292 74.7
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.9e-123 445.3 304 73.4
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 6.7e-123 444.5 294 74.1
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 1.1e-122 443.7 292 73.6
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 1.1e-122 443.7 263 81.4
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 1.5e-122 443.4 261 81.2
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 2.0e-122 443.0 292 73.6
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 3.3e-122 442.2 261 81.6
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 5.7e-122 441.4 300 71.7
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 5.7e-122 441.4 283 74.9
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 7.4e-122 441.0 292 73.6
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 9.7e-122 440.7 269 78.8
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 9.7e-122 440.7 257 82.5
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 9.7e-122 440.7 294 74.1
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.7e-121 439.9 295 71.9
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 4.8e-121 438.3 292 72.3
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.1e-120 437.2 264 79.5
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 2.4e-120 436.0 292 72.6
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 2.4e-120 436.0 283 74.9
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 4.1e-120 435.3 288 72.6
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 5.3e-120 434.9 294 73.5
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 9.1e-120 434.1 262 79.0
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.2e-119 433.7 292 71.6
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 2.6e-119 432.6 292 72.9
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 4.5e-119 431.8 292 71.9
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.9e-118 429.1 258 79.5
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 3.8e-118 428.7 282 73.4
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 3.8e-118 428.7 275 75.3
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 6.5e-118 427.9 275 75.6
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 1.4e-117 426.8 266 78.9
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 1.4e-117 426.8 287 71.1
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 1.2e-116 423.7 278 73.7
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 3.6e-116 422.2 276 73.9
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 3.6e-116 422.2 291 71.1
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 4.7e-116 421.8 298 69.1
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 4.7e-116 421.8 274 74.5
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 4.7e-116 421.8 275 74.5
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 8.0e-116 421.0 294 70.4
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.8e-115 419.9 281 73.0
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 1.8e-115 419.9 300 69.3
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 3.0e-115 419.1 264 76.5
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 3.0e-115 419.1 258 77.5
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 3.9e-115 418.7 286 69.2
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 1.1e-114 417.2 281 72.6
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 1.5e-114 416.8 264 74.6
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 3.3e-114 415.6 264 75.8
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 3.3e-114 415.6 262 74.4
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 3.3e-114 415.6 263 74.9
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 4.4e-114 415.2 281 71.9
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 4.4e-114 415.2 300 70.0
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 5.7e-114 414.8 281 72.6
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 5.7e-114 414.8 281 72.6
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 2.2e-113 412.9 287 69.3
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 8.2e-113 411.0 285 70.2
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 1.6e-111 406.8 266 72.6
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 7.7e-111 404.4 260 73.8
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 1.7e-110 403.3 268 74.3
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 2.2e-110 402.9 258 74.0
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 2.5e-109 399.4 260 73.8
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 9.4e-109 397.5 287 68.3
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 7.5e-106 387.9 334 60.2
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.3e-102 377.1 309 64.7
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.6e-100 370.2 261 71.3
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 3.7e-97 359.0 258 64.0
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.8e-96 356.7 214 78.5
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 4.1e-96 355.5 193 85.0
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 1.9e-93 346.7 193 82.9
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 4.7e-92 342.0 266 65.8
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 1.5e-90 337.0 258 63.2
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.6e-90 336.3 256 68.0
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 4.4e-90 335.5 193 79.8
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 5.7e-90 335.1 260 61.2
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.7e-89 333.6 288 57.3
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 1.8e-88 330.1 255 61.2
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 5.0e-78 295.4 156 85.9
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 4.4e-74 282.3 171 76.6
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 2.9e-73 279.6 159 81.8
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.7e-68 262.3 134 85.8
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 7.8e-63 245.0 187 65.8
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.6e-60 236.1 219 58.0
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 7.3e-53 211.8 261 42.9
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 6.2e-52 208.8 178 61.8
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 8.1e-52 208.4 148 70.9
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 1.1e-51 208.0 204 52.0
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 4.8e-44 182.6 293 40.6
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 1.8e-43 180.6 184 57.1
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.9e-41 172.6 140 61.4
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 7.1e-40 168.7 146 61.0
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 8.7e-38 161.8 275 34.2
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 4.0e-27 126.3 208 36.5
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 6.9e-27 125.6 154 44.8
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.7e-25 120.9 278 33.8
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.8e-17 93.2 85 54.1
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 6.5e-17 92.4 232 28.9
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 8.5e-17 92.0 101 47.5
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 1.2e-15 88.2 57 75.4
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 2.4e-11 73.9 41 82.9
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.9e-09 67.0 42 76.2
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.0e-06 58.5 52 51.9
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.4e-06 58.2 30 86.7
SEGI_18314 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 3.9e-06 56.6 25 92.0


User provided reference genes

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