Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 9.0e-51 203.4 108 100.0
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.0e-22 108.6 63 84.1
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.0e-22 108.6 63 84.1
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 8.8e-22 107.1 80 66.2
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 1.1e-21 106.7 63 81.0
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 1.5e-21 106.3 63 81.0
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 3.3e-21 105.1 62 80.6
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 2.8e-20 102.1 58 87.9
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 3.7e-20 101.7 58 84.5
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 2.4e-19 99.0 64 76.6
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 3.1e-19 98.6 63 76.2
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 3.1e-19 98.6 65 70.8
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 1.5e-18 96.3 58 81.0
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 1.5e-18 96.3 59 79.7
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 2.6e-18 95.5 67 67.2
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 4.5e-18 94.7 66 69.7
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 2.2e-17 92.4 54 83.3
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 2.2e-17 92.4 62 72.6
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 8.5e-17 90.5 69 60.9
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 8.5e-17 90.5 60 73.3
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 8.5e-17 90.5 60 73.3
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 1.1e-16 90.1 65 69.2
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 1.9e-16 89.4 89 55.1
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.6e-15 86.3 62 64.5
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 1.0e-14 83.6 57 71.9
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 2.3e-14 82.4 64 59.4
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 6.7e-14 80.9 50 76.0
arahy.Tifrunner.gnm1.ann1.28YW2N Arachis hypogaea HOM05D033635 ORTHO05D031606 8.8e-14 80.5 58 75.9
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 3.3e-13 78.6 52 73.1
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 3.3e-13 78.6 55 69.1
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 4.4e-13 78.2 57 70.2
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 5.7e-13 77.8 56 69.6
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 7.4e-13 77.4 91 50.5
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 7.4e-13 77.4 48 75.0
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 1.3e-12 76.6 67 61.2
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 1.3e-12 76.6 58 62.1
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.7e-12 76.3 51 72.5
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 3.7e-12 75.1 45 82.2
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 3.7e-12 75.1 52 69.2
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 4.8e-12 74.7 39 84.6
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 6.3e-12 74.3 45 80.0
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 6.3e-12 74.3 54 66.7
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 6.3e-12 74.3 54 66.7
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 8.2e-12 73.9 60 60.0
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 8.2e-12 73.9 53 67.9
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 1.1e-11 73.6 51 70.6
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.1e-11 73.6 51 70.6
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.1e-11 73.6 51 70.6
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.1e-11 73.6 51 70.6
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 1.1e-11 73.6 54 66.7
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 1.1e-11 73.6 62 58.1
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 2.4e-11 72.4 99 44.4
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 2.4e-11 72.4 51 64.7
arahy.Tifrunner.gnm1.ann1.BG32VG Arachis hypogaea HOM05D033635 ORTHO05D031606 9.1e-11 70.5 60 66.7
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 5.9e-10 67.8 44 75.0
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 7.7e-10 67.4 47 68.1
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 7.7e-10 67.4 52 63.5
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 7.7e-10 67.4 52 63.5
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 1.0e-09 67.0 53 58.5
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.3e-09 66.6 46 69.6
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.7e-09 66.2 42 76.2
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 1.7e-09 66.2 45 71.1
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 2.2e-09 65.9 45 68.9
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 5.0e-09 64.7 91 42.9
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 6.5e-09 64.3 48 64.6
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 8.5e-09 63.9 55 58.2
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 8.5e-09 63.9 45 66.7
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 1.5e-08 63.2 52 59.6
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 1.9e-08 62.8 45 66.7
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 4.2e-08 61.6 51 58.8
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 5.5e-08 61.2 46 65.2
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 1.2e-07 60.1 48 56.2
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.6e-07 59.7 40 75.0
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 2.7e-07 58.9 44 63.6
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 2.7e-07 58.9 51 52.9
CSS0011895 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 3.6e-07 58.5 39 74.4
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 8.0e-07 57.4 53 56.6
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 1.8e-06 56.2 34 76.5
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 2.3e-06 55.8 47 51.1
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.3e-06 55.8 40 70.0
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 3.0e-06 55.5 51 52.9
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 5.2e-06 54.7 46 52.2
AT5G22320 Arabidopsis thaliana HOM05D012474 ORTHO05D008520 6.7e-06 54.3 46 52.2
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 6.7e-06 54.3 34 76.5


User provided reference genes

Program Settings