Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 9.0e-212 740.0 366 100.0
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 9.0e-212 740.0 366 100.0
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 1.3e-149 533.5 372 70.7
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 1.3e-146 523.5 376 66.8
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 1.5e-145 520.0 375 68.3
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 2.5e-145 519.2 372 67.7
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 3.3e-145 518.8 374 66.8
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 4.3e-145 518.5 374 67.1
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 1.6e-144 516.5 373 66.5
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 1.1e-143 513.8 377 66.6
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 2.0e-142 509.6 375 65.3
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 4.4e-142 508.4 374 66.0
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 7.6e-142 507.7 374 65.8
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 9.9e-142 507.3 374 65.8
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 1.3e-141 506.9 374 66.0
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 3.7e-141 505.4 377 65.0
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 2.1e-139 499.6 376 65.2
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 2.1e-139 499.6 373 64.3
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 3.5e-139 498.8 374 65.0
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.0e-138 497.3 374 63.9
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.7e-138 496.5 374 64.2
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 2.3e-138 496.1 371 66.3
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 3.0e-138 495.7 377 65.0
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 3.9e-138 495.4 374 65.0
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 4.3e-137 491.9 374 63.1
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 9.6e-137 490.7 377 64.5
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 2.1e-136 489.6 376 63.0
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.8e-136 489.2 374 63.1
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 3.6e-136 488.8 374 63.1
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 6.2e-136 488.0 374 64.2
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 8.1e-136 487.6 374 62.3
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.4e-135 486.9 371 63.1
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 1.4e-135 486.9 374 65.0
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 1.4e-135 486.9 375 63.5
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 3.1e-135 485.7 377 64.2
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 3.1e-135 485.7 376 62.8
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 4.0e-135 485.3 374 63.9
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 4.0e-135 485.3 377 62.6
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 5.2e-135 485.0 377 61.5
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 5.2e-135 485.0 374 65.0
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 2.0e-134 483.0 377 62.1
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 2.6e-134 482.6 376 63.0
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 2.6e-134 482.6 377 62.6
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 9.9e-134 480.7 374 61.0
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.7e-133 479.9 371 62.3
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 2.9e-133 479.2 376 62.5
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 3.8e-133 478.8 371 62.3
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 6.4e-133 478.0 373 60.6
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 8.4e-133 477.6 367 61.9
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.2e-131 473.8 373 60.3
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 6.0e-131 471.5 377 61.0
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 6.0e-131 471.5 375 62.7
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 7.8e-131 471.1 375 60.3
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 1.0e-130 470.7 373 61.1
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 6.6e-130 468.0 373 60.6
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 7.3e-129 464.5 370 61.4
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.3e-128 463.8 375 58.9
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 4.8e-128 461.8 373 59.2
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 8.1e-128 461.1 377 58.9
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 1.4e-127 460.3 374 60.7
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 2.6e-126 456.1 375 57.9
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 7.6e-126 454.5 375 58.1
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 4.9e-125 451.8 345 64.1
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 5.4e-124 448.4 365 60.8
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 1.2e-123 447.2 374 58.8
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 2.1e-123 446.4 374 58.6
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 3.5e-123 445.7 374 58.3
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 1.3e-122 443.7 374 58.0
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 2.5e-121 439.5 374 58.0
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 5.6e-121 438.3 377 57.0
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 7.4e-121 438.0 375 57.9
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 2.1e-120 436.4 364 58.0
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 1.4e-119 433.7 374 57.2
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 4.0e-119 432.2 386 56.7
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 9.0e-119 431.0 374 57.8
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 1.3e-117 427.2 374 56.7
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 4.9e-117 425.2 365 57.5
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 8.4e-117 424.5 366 57.7
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 8.4e-117 424.5 366 57.7
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 1.1e-116 424.1 366 57.4
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.4e-116 423.7 375 55.7
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 2.4e-116 422.9 365 57.3
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 4.2e-116 422.2 366 56.8
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 1.3e-112 410.6 376 56.4
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 2.6e-110 402.9 377 51.7
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 1.3e-109 400.6 372 54.8
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 8.4e-109 397.9 375 50.4
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.5e-108 396.4 352 56.0
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 2.3e-106 389.8 373 52.0
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 8.7e-106 387.9 286 65.0
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.1e-104 383.3 276 64.9
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 1.4e-103 380.6 331 57.1
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.6e-102 376.3 342 57.3
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 4.5e-102 375.6 337 56.1
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 6.5e-93 345.1 360 52.2
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 5.5e-92 342.0 239 65.3
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 6.1e-91 338.6 372 49.5
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 2.0e-86 323.6 380 41.8
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 2.7e-83 313.2 252 61.9
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 8.2e-80 301.6 385 41.3
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 3.5e-78 296.2 377 43.2
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 5.9e-78 295.4 192 70.8
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 9.7e-73 278.1 238 58.4
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 6.1e-67 258.8 193 64.2
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.7e-64 250.8 162 68.5
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.2e-62 244.6 240 52.1
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 1.0e-53 214.9 233 48.9
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 7.3e-52 208.8 160 61.9
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 8.9e-50 201.8 201 54.2
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.2e-48 197.2 171 59.6
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 7.3e-44 182.2 172 58.7
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 9.5e-44 181.8 110 77.3
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 9.5e-44 181.8 136 63.2
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 4.7e-43 179.5 169 53.8
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 2.9e-40 170.2 149 58.4
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 7.8e-38 162.2 349 30.7
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 2.3e-37 160.6 417 28.3
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 8.6e-37 158.7 209 42.6
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 6.2e-35 152.5 93 75.3
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 8.9e-34 148.7 127 59.8
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 1.9e-31 141.0 360 29.7
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 4.6e-30 136.3 93 75.3
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 6.0e-30 136.0 129 56.6
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 1.5e-28 131.3 125 57.6
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 1.1e-23 115.2 457 24.9
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 1.3e-21 108.2 85 55.3
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.3e-20 103.6 70 68.6
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 2.8e-19 100.5 224 32.6
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 1.4e-18 98.2 208 31.7
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.6e-11 74.7 83 44.6
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 3.4e-09 67.0 54 57.4
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 8.4e-08 62.4 87 46.0
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 2.1e-06 57.8 72 48.6


User provided reference genes

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