Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 6.0e-69 264.2 151 100.0
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 1.6e-45 186.4 154 68.8
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.1e-21 106.3 162 48.8
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 3.6e-21 105.5 140 45.0
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 3.0e-20 102.4 143 48.3
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 8.8e-20 100.9 159 46.5
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 4.4e-19 98.6 149 48.3
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.1e-17 94.0 141 47.5
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 4.5e-16 88.6 143 43.4
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.3e-15 87.0 151 39.7
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 8.5e-15 84.3 144 38.9
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 8.5e-15 84.3 137 39.4
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 3.6e-13 79.0 137 39.4
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.4e-12 77.0 89 49.4
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 4.0e-12 75.5 106 49.1
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 6.7e-12 74.7 115 41.7
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.7e-12 74.7 145 37.9
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 6.7e-12 74.7 145 37.9
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.5e-11 73.6 136 33.8
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 9.7e-11 70.9 60 58.3
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 9.7e-11 70.9 155 35.5
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 9.7e-11 70.9 141 38.3
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 1.3e-10 70.5 64 57.8
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.2e-10 69.7 154 35.1
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.2e-10 69.7 139 36.7
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.8e-10 69.3 64 56.2
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 2.8e-10 69.3 145 35.2
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.7e-10 68.9 156 32.7
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 3.7e-10 68.9 134 38.1
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 3.7e-10 68.9 79 49.4
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 6.3e-10 68.2 141 36.9
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 8.2e-10 67.8 147 38.1
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 8.2e-10 67.8 54 63.0
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.1e-09 67.4 115 40.9
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 1.1e-09 67.4 148 33.8
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-09 67.4 64 59.4
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-09 67.4 64 59.4
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.8e-09 66.6 110 45.5
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 3.1e-09 65.9 58 56.9
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 4.1e-09 65.5 61 57.4
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.2e-08 63.9 151 35.1
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.6e-08 63.5 79 43.0
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.0e-08 63.2 133 33.8
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 2.0e-08 63.2 58 53.4
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.7e-08 62.8 62 58.1
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.7e-08 62.8 97 43.3
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 3.5e-08 62.4 56 57.1
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.5e-08 62.0 122 38.5
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 5.9e-08 61.6 56 55.4
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 7.7e-08 61.2 119 37.8
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.0e-07 60.8 148 35.1
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.0e-07 60.8 67 56.7
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 1.3e-07 60.5 67 55.2
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 1.7e-07 60.1 56 55.4
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.7e-07 60.1 129 31.8
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 1.7e-07 60.1 58 53.4
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 2.2e-07 59.7 146 36.3
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.2e-07 59.7 95 45.3
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.2e-07 59.7 60 53.3
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 2.2e-07 59.7 137 35.8
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.9e-07 59.3 145 32.4
SalBow4G0071 Salvia bowleyana HOM05D005967 ORTHO05D005174 2.9e-07 59.3 121 37.2
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.8e-07 58.9 60 51.7
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 3.8e-07 58.9 58 48.3
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 5.0e-07 58.5 99 41.4
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 5.0e-07 58.5 105 39.0
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 6.5e-07 58.2 147 34.7
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 8.5e-07 57.8 95 42.1
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.1e-06 57.4 130 36.9
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 1.1e-06 57.4 152 34.2
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.5e-06 57.0 124 33.1
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 1.5e-06 57.0 103 38.8
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 1.5e-06 57.0 103 38.8
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 1.5e-06 57.0 103 38.8
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 2.5e-06 56.2 77 44.2
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.5e-06 56.2 153 33.3
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 2.5e-06 56.2 76 43.4
Haze_20783 Corylus avellana HOM05D005967 ORTHO05D005174 3.2e-06 55.8 37 75.7
Nitab4.5_0000349g0170 Nicotiana tabacum HOM05D016316 ORTHO05D018871 3.2e-06 55.8 138 39.1
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 4.2e-06 55.5 115 35.7
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 5.5e-06 55.1 83 42.2
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 7.2e-06 54.7 62 48.4
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 7.2e-06 54.7 142 35.2
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 9.4e-06 54.3 58 51.7
Nitab4.5_0000349g0250 Nicotiana tabacum HOM05D016316 ORTHO05D018871 9.4e-06 54.3 106 36.8
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 9.4e-06 54.3 58 48.3
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 9.4e-06 54.3 120 32.5


User provided reference genes

Program Settings