Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 2.6e-74 282.0 141 100.0
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 1.3e-49 199.9 142 76.8
Oeu048107.1 Olea europaea HOM05D026131 ORTHO05D009956 4.6e-23 111.7 142 53.5
MSTRG.13480 Avicennia marina HOM05D026131 ORTHO05D031628 3.2e-16 89.0 147 46.3
Cc11_g11230 Coffea canephora HOM05D011353 ORTHO05D009956 3.2e-16 89.0 136 43.4
Nitab4.5_0005310g0050 Nicotiana tabacum HOM05D011353 ORTHO05D014734 1.0e-14 84.0 138 43.5
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 6.7e-14 81.3 136 45.6
Solyc05g010270.1 Solanum lycopersicum HOM05D011353 ORTHO05D009802 1.5e-13 80.1 136 45.6
Peaxi162Scf00188g00068 Petunia axillaris HOM05D011353 ORTHO05D009802 3.3e-13 79.0 137 43.8
PGSC0003DMG400025096 Solanum tuberosum HOM05D011353 ORTHO05D009802 3.3e-13 79.0 136 44.1
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 9.7e-13 77.4 134 44.8
SGA_v2.0_scaffold14G06777 Striga asiatica HOM05D011353 ORTHO05D009956 1.3e-12 77.0 128 46.1
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 3.5e-10 68.9 81 55.6
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 3.5e-10 68.9 138 39.1
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 7.7e-10 67.8 78 56.4
unitig_21.g20864 Utricularia gibba HOM05D011353 ORTHO05D009956 1.7e-09 66.6 146 41.1
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 1.1e-08 63.9 125 38.4
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 1.9e-08 63.2 79 54.4
Migut.E00267 Erythranthe guttata HOM05D011353 ORTHO05D009956 2.5e-08 62.8 160 39.4
Actinidia30176 Actinidia chinensis HOM05D011353 ORTHO05D009802 3.2e-08 62.4 134 40.3
Phvul.009G190900 Phaseolus vulgaris HOM05D008563 ORTHO05D009802 4.2e-08 62.0 69 56.5
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 5.5e-08 61.6 124 43.5
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 5.5e-08 61.6 126 40.5
Rhsim09G0117600 Rhododendron simsii HOM05D011353 ORTHO05D009802 5.5e-08 61.6 135 38.5
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 7.2e-08 61.2 143 37.8
unitig_699.g19509 Utricularia gibba HOM05D014692 ORTHO05D014734 7.2e-08 61.2 130 40.8
Ca_02709_v3 Cicer arietinum L. HOM05D008563 ORTHO05D009956 9.4e-08 60.8 135 35.6
unitig_744.g24288 Utricularia gibba HOM05D009227 ORTHO05D009956 9.4e-08 60.8 144 39.6
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 1.2e-07 60.5 83 48.2
RcHm_v2.0_Chr7g0184051 Rosa chinensis HOM05D021981 ORTHO05D009802 1.6e-07 60.1 83 48.2
SalBow8G2751 Salvia bowleyana HOM05D026131 ORTHO05D031628 1.6e-07 60.1 142 38.7
SalBow8G3286 Salvia bowleyana HOM05D026131 ORTHO05D031628 1.6e-07 60.1 142 38.7
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 1.6e-07 60.1 133 36.8
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.1e-07 59.7 132 40.2
ECA246G0528 Erigeron canadensis HOM05D008563 ORTHO05D009802 2.7e-07 59.3 132 40.9
Glyma.04G157900 Glycine max HOM05D008563 ORTHO05D009956 2.7e-07 59.3 66 56.1
FvH4_6g45950 Fragaria vesca HOM05D008889 ORTHO05D009956 3.6e-07 58.9 81 48.1
FAN02G0304 Fragaria x ananassa HOM05D008889 ORTHO05D009956 3.6e-07 58.9 81 48.1
FAN14G5446 Fragaria x ananassa HOM05D008889 ORTHO05D009956 3.6e-07 58.9 81 48.1
Nitab4.5_0000149g0140 Nicotiana tabacum HOM05D011353 ORTHO05D009802 3.6e-07 58.9 113 41.6
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 3.6e-07 58.9 66 53.0
Gorai.003G104300 Gossypium raimondii HOM05D008563 ORTHO05D009802 4.7e-07 58.5 151 33.8
Ciclev10013380m.g Citrus clementina HOM05D008889 ORTHO05D009956 6.1e-07 58.2 120 40.0
CiPaw.15G117600 Carya illinoinensis HOM05D008563 ORTHO05D009802 8.0e-07 57.8 136 36.8
RcHm_v2.0_Chr2g0164181 Rosa chinensis HOM05D008889 ORTHO05D009956 8.0e-07 57.8 120 40.8
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.0e-06 57.4 132 39.4
FAN22G0750 Fragaria x ananassa HOM05D014692 ORTHO05D014734 1.0e-06 57.4 104 42.3
unitig_27.g25224 Utricularia gibba HOM05D008889 ORTHO05D009956 1.0e-06 57.4 111 40.5
FAN05G4365 Fragaria x ananassa HOM05D008889 ORTHO05D009956 1.4e-06 57.0 81 46.9
FAN09G2052 Fragaria x ananassa HOM05D008889 ORTHO05D009956 1.8e-06 56.6 81 46.9
Sabra08G0086100 Salix brachista HOM05D018804 ORTHO05D013371 1.8e-06 56.6 97 47.4
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 1.8e-06 56.6 139 31.7
CSS0028308 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009802 2.3e-06 56.2 134 40.3
Gohir.A08G052300 Gossypium hirsutum HOM05D008889 ORTHO05D009956 2.3e-06 56.2 77 44.2
Gohir.D03G099300 Gossypium hirsutum HOM05D008563 ORTHO05D009802 2.3e-06 56.2 150 34.7
Gorai.004G064000 Gossypium raimondii HOM05D009227 ORTHO05D009956 2.3e-06 56.2 77 44.2
Medtr2g058870 Medicago truncatula HOM05D008563 ORTHO05D009956 2.3e-06 56.2 136 34.6
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 2.3e-06 56.2 141 38.3
Potri.008G113800 Populus trichocarpa HOM05D018804 ORTHO05D013371 2.3e-06 56.2 137 41.6
QL02p063786 Quercus lobata HOM05D009227 ORTHO05D009956 2.3e-06 56.2 93 41.9
Sabra10G0103600 Salix brachista HOM05D018804 ORTHO05D013371 3.0e-06 55.8 131 39.7
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 3.0e-06 55.8 130 38.5
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 4.0e-06 55.5 144 39.6
Aqoxy3G03789 Aquilegia oxysepala HOM05D018804 ORTHO05D009802 4.0e-06 55.5 137 35.0
AL7G51640 Arabidopsis lyrata HOM05D009227 ORTHO05D009956 4.0e-06 55.5 74 50.0
FAN07G0328 Fragaria x ananassa HOM05D014692 ORTHO05D014734 4.0e-06 55.5 134 37.3
Nitab4.5_0010998g0060 Nicotiana tabacum HOM05D011353 ORTHO05D009802 4.0e-06 55.5 113 40.7
C02p56090 Brassica napus HOM05D009227 ORTHO05D009956 5.2e-06 55.1 80 47.5
BolC2t11666H Brassica oleracea HOM05D009227 ORTHO05D009956 5.2e-06 55.1 80 47.5
Ca_23534_v3 Cicer arietinum L. HOM05D008889 ORTHO05D009956 5.2e-06 55.1 132 36.4
Duzib133G1477 Durio zibethinus HOM05D008889 ORTHO05D009956 5.2e-06 55.1 113 37.2
FAN17G2419 Fragaria x ananassa HOM05D014692 ORTHO05D014734 5.2e-06 55.1 134 37.3
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 5.2e-06 55.1 68 50.0
Potri.017G107000 Populus trichocarpa HOM05D008889 ORTHO05D009956 5.2e-06 55.1 113 42.5
Sopen06g026600 Solanum pennellii HOM05D014920 ORTHO05D009802 5.2e-06 55.1 106 45.3
Manes.14G093100 Manihot esculenta HOM05D018804 ORTHO05D014734 6.7e-06 54.7 143 41.3
Sabra04G0073700 Salix brachista HOM05D008889 ORTHO05D009956 6.7e-06 54.7 80 45.0
A02p37090 Brassica napus HOM05D009227 ORTHO05D009956 8.8e-06 54.3 80 46.2
BraA02t08695Z Brassica rapa HOM05D009227 ORTHO05D009956 8.8e-06 54.3 80 46.2
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 8.8e-06 54.3 147 36.7


User provided reference genes

Program Settings