Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 1.1e-145 520.0 267 100.0
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.0e-124 450.3 269 87.4
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 3.7e-122 441.8 269 86.6
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 3.7e-122 441.8 269 86.6
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 2.6e-107 392.5 268 73.5
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 5.8e-107 391.3 267 72.3
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 9.8e-107 390.6 267 72.3
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 4.7e-101 371.7 268 71.6
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 8.1e-101 370.9 271 70.8
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.2e-99 367.1 271 70.8
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 5.8e-99 364.8 268 70.9
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.7e-98 363.2 271 70.1
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 3.7e-98 362.1 267 70.8
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.4e-97 360.1 271 69.4
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 1.9e-97 359.8 271 68.6
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 5.4e-97 358.2 271 69.0
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.3e-95 352.8 273 67.4
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 7.3e-94 347.8 269 66.9
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 4.7e-93 345.1 249 71.5
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.4e-91 339.0 269 66.9
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 1.7e-90 336.7 271 64.6
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 8.4e-90 334.3 271 65.3
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 7.1e-89 331.3 268 65.3
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 7.1e-89 331.3 268 65.3
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 3.5e-88 328.9 271 62.4
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 1.0e-87 327.4 260 66.5
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 1.3e-87 327.0 271 61.3
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.3e-87 327.0 272 61.8
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.7e-87 326.6 267 61.4
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 2.3e-87 326.2 271 63.1
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 3.0e-87 325.9 272 61.8
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 3.0e-87 325.9 270 64.4
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 5.1e-87 325.1 274 62.4
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 6.6e-87 324.7 271 61.6
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 1.5e-86 323.6 272 61.4
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 7.3e-86 321.2 267 65.2
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.2e-85 320.5 268 64.2
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.2e-85 320.5 271 61.6
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.8e-85 319.3 248 65.7
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 3.1e-84 315.8 272 62.5
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 4.0e-84 315.5 271 59.8
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 4.0e-84 315.5 267 61.4
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 1.1e-81 307.4 272 59.2
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 1.1e-81 307.4 253 62.1
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 1.2e-80 303.9 270 58.5
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 1.6e-80 303.5 237 63.7
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 2.7e-80 302.8 247 61.5
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 6.0e-80 301.6 249 61.0
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 6.0e-80 301.6 268 61.9
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.3e-79 300.4 238 62.2
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 3.9e-79 298.9 269 59.1
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.1e-78 297.4 233 63.9
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 1.9e-78 296.6 269 58.0
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 5.6e-78 295.0 275 57.8
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 1.4e-76 290.4 269 58.0
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.8e-76 290.0 269 57.2
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.5e-75 287.0 270 57.0
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 2.0e-75 286.6 269 57.6
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 4.4e-75 285.4 272 56.6
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 7.6e-75 284.6 215 63.7
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 9.9e-75 284.3 214 70.1
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.3e-74 283.9 272 57.0
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 6.4e-74 281.6 270 55.9
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.9e-73 280.0 270 56.3
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.6e-72 276.9 268 55.6
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 2.7e-72 276.2 270 55.9
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 4.6e-72 275.4 270 55.2
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 6.0e-72 275.0 272 55.9
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 2.3e-71 273.1 277 55.2
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 5.1e-71 271.9 272 56.2
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.1e-70 270.8 272 55.1
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.1e-70 270.8 272 55.1
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 1.1e-70 270.8 274 54.7
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 1.1e-70 270.8 274 54.7
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 1.5e-70 270.4 269 53.5
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.9e-70 270.0 270 54.1
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 3.3e-70 269.2 278 54.7
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 3.3e-70 269.2 253 58.1
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 4.3e-70 268.9 267 54.7
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 7.3e-70 268.1 270 53.0
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 7.3e-70 268.1 270 54.1
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 8.1e-69 264.6 200 67.5
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 9.9e-67 257.7 270 55.9
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 1.7e-66 256.9 267 52.4
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 3.3e-62 242.7 274 50.7
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 4.3e-62 242.3 274 50.7
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 7.6e-59 231.5 271 47.6
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 5.5e-57 225.3 236 53.4
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 5.5e-57 225.3 269 49.4
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.5e-54 217.2 267 47.6
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 1.3e-53 214.2 268 46.3
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 1.3e-53 214.2 268 46.3
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 1.1e-52 211.1 267 46.8
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 9.0e-52 208.0 269 45.0
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 2.0e-51 206.8 267 46.8
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.0e-50 204.5 221 54.3
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 3.8e-50 202.6 255 45.9
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 3.2e-49 199.5 268 46.6
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 4.2e-49 199.1 259 43.6
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 5.5e-49 198.7 241 48.1
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 2.3e-47 193.4 268 44.4
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 6.7e-47 191.8 235 46.4
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 4.6e-40 169.1 270 41.1
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 3.0e-39 166.4 198 50.0
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 3.9e-39 166.0 198 49.5
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 8.2e-37 158.3 239 41.4
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 4.5e-35 152.5 270 35.2
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 4.7e-32 142.5 225 40.0
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 4.8e-29 132.5 158 46.8
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 3.8e-26 122.9 218 41.3
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 8.5e-26 121.7 107 57.9
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 9.4e-25 118.2 221 33.9
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 1.2e-24 117.9 218 37.6
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.6e-24 117.5 228 36.8
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.8e-23 114.0 108 53.7
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 5.2e-23 112.5 88 60.2
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 5.0e-18 95.9 119 46.2
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 4.7e-16 89.4 89 51.7
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.6e-11 74.3 48 66.7
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 3.8e-10 69.7 223 29.1
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 2.0e-06 57.4 62 48.4
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 9.8e-06 55.1 37 67.6


User provided reference genes

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