Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024124.1 Olea europaea HOM05D007408 ORTHO05D009325 1.2e-82 309.7 151 100.0
Migut.L01119 Erythranthe guttata HOM05D007408 ORTHO05D009325 2.6e-40 169.1 158 60.1
SalBow8G1270 Salvia bowleyana HOM05D007408 ORTHO05D009325 1.3e-39 166.8 149 59.7
SalBow8G3082 Salvia bowleyana HOM05D007408 ORTHO05D009325 1.3e-39 166.8 149 59.7
Cc11_g10990 Coffea canephora HOM05D007408 ORTHO05D009325 5.5e-38 161.4 153 52.3
SGA_v2.0_scaffold36G14509 Striga asiatica HOM05D007408 ORTHO05D009325 6.7e-36 154.5 151 54.3
CiPaw.06G098200 Carya illinoinensis HOM05D007408 ORTHO05D009325 1.4e-30 136.7 152 50.7
Manes.06G075900 Manihot esculenta HOM05D007408 ORTHO05D009325 1.4e-30 136.7 155 48.4
Solyc05g010130.1 Solanum lycopersicum HOM05D007408 ORTHO05D009325 5.5e-30 134.8 154 45.5
MD13G1050800 Malus domestica HOM05D007408 ORTHO05D009325 4.6e-29 131.7 146 47.9
Atru.chr11.1432 Acer truncatum HOM05D007408 ORTHO05D009325 6.1e-29 131.3 155 45.2
Prupe.1G301300 Prunus persica HOM05D007408 ORTHO05D009325 4.4e-27 125.2 157 43.9
DCAR_026703 Daucus carota HOM05D002818 ORTHO05D003244 4.8e-26 121.7 120 54.2
Glyma.16G099500 Glycine max HOM05D007408 ORTHO05D009325 1.1e-25 120.6 121 52.9
Eucgr.B03072 Eucalyptus grandis HOM05D007408 ORTHO05D009325 1.4e-25 120.2 158 44.3
TWI79G0837 Tripterygium wilfordii HOM05D007408 ORTHO05D009325 5.3e-25 118.2 148 42.6
Cfa008792 Carpinus fangiana HOM05D007408 ORTHO05D009325 2.0e-24 116.3 155 42.6
RcHm_v2.0_Chr4g0436431 Rosa chinensis HOM05D007408 ORTHO05D009325 3.4e-24 115.5 150 46.0
Lalb_Chr20g0122411 Lupinus albus HOM05D007408 ORTHO05D009325 4.5e-24 115.2 154 42.2
Potri.008G111500 Populus trichocarpa HOM05D007408 ORTHO05D009325 4.5e-24 115.2 146 45.9
VMungo0251G2162 Vigna mungo HOM05D007408 ORTHO05D009325 3.8e-23 112.1 124 49.2
Thecc.02G364900 Theobroma cacao HOM05D007408 ORTHO05D009325 6.5e-23 111.3 124 49.2
Sabra08G0084200 Salix brachista HOM05D007408 ORTHO05D009325 8.5e-23 110.9 129 48.1
FAN07G2148 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.4e-22 110.2 117 48.7
HanXRQChr17g0551421 Helianthus annuus HOM05D007408 ORTHO05D009325 1.4e-22 110.2 126 46.8
CANSAT64G2960 Cannabis sativa HOM05D007408 ORTHO05D009325 1.9e-22 109.8 171 39.8
FAN12G0389 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.9e-22 109.8 117 48.7
FAN17G1226 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.9e-22 109.8 117 48.7
FAN22G2286 Fragaria x ananassa HOM05D000227 ORTHO05D001491 3.2e-22 109.0 117 48.7
Phvul.003G281600 Phaseolus vulgaris HOM05D007408 ORTHO05D009325 2.7e-21 105.9 123 48.0
HanXRQChr15g0475971 Helianthus annuus HOM05D007408 ORTHO05D009325 4.7e-21 105.1 128 43.0
PGR119G0146 Punica granatum HOM05D007408 ORTHO05D009325 4.7e-21 105.1 151 44.4
Haze_11804 Corylus avellana HOM05D007408 ORTHO05D009325 6.1e-21 104.8 130 43.1
TAR629G0610 Trochodendron aralioides HOM05D007408 ORTHO05D009325 3.9e-20 102.1 149 40.9
Cpa.g.sc1.248 Carica papaya HOM05D007408 ORTHO05D009325 5.2e-20 101.7 145 44.1
Ah.02g127260 Amaranthus hybridus HOM05D007408 ORTHO05D009325 6.7e-20 101.3 174 34.5
Lj4g0027659 Lotus japonicus HOM05D007408 ORTHO05D009325 6.7e-20 101.3 120 51.7
Lsat_1_v5_gn_3_60200 Lactuca sativa HOM05D007408 ORTHO05D009325 2.0e-19 99.8 141 42.6
THA.LOC104822179 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 4.4e-19 98.6 115 47.8
TPR.G24816 Trifolium pratense HOM05D007408 ORTHO05D009325 4.4e-19 98.6 123 49.6
BcaC06g31130 Brassica carinata HOM05D007408 ORTHO05D009325 1.3e-18 97.1 133 44.4
Gohir.D12G176300 Gossypium hirsutum HOM05D007408 ORTHO05D009325 1.7e-18 96.7 136 45.6
Gorai.008G188700 Gossypium raimondii HOM05D007408 ORTHO05D009325 1.7e-18 96.7 136 45.6
CARHR146570 Cardamine hirsuta HOM05D007408 ORTHO05D009325 2.2e-18 96.3 167 39.5
Gohir.A12G173800 Gossypium hirsutum HOM05D007408 ORTHO05D009325 2.2e-18 96.3 138 43.5
CsaV3_2G010890 Cucumis sativus L. HOM05D007408 ORTHO05D009325 2.8e-18 95.9 142 42.3
Sc11g0002930 Simmondsia chinensis HOM05D007408 ORTHO05D009325 6.3e-18 94.7 149 38.9
Psat4g113200 Pisum sativum HOM05D007408 ORTHO05D009325 1.1e-17 94.0 114 47.4
arahy.Tifrunner.gnm1.ann1.24G1QJ Arachis hypogaea HOM05D007408 ORTHO05D009325 1.8e-17 93.2 142 43.7
BcaC03g17274 Brassica carinata HOM05D007408 ORTHO05D009325 3.1e-17 92.4 169 36.1
C02p52180 Brassica napus HOM05D007408 ORTHO05D009325 3.1e-17 92.4 169 36.1
BolC2t11303H Brassica oleracea HOM05D007408 ORTHO05D009325 3.1e-17 92.4 169 36.1
AT3G25597 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 4.1e-17 92.0 145 39.3
Thhalv10005058m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 4.1e-17 92.0 134 42.5
Medtr8g069910 Medicago truncatula HOM05D007408 ORTHO05D009325 4.1e-17 92.0 114 46.5
Sed0018728 Sechium edule HOM05D007408 ORTHO05D009325 4.1e-17 92.0 116 46.6
Sp2g14870 Schrenkiella parvula HOM05D007408 ORTHO05D009325 5.3e-17 91.7 133 44.4
A06p42710 Brassica napus HOM05D007408 ORTHO05D009325 9.1e-17 90.9 132 43.2
Ciclev10033573m.g Citrus clementina HOM05D007408 ORTHO05D009325 9.1e-17 90.9 113 43.4
BraA06t27184Z Brassica rapa HOM05D007408 ORTHO05D009325 2.0e-16 89.7 146 40.4
AL5G14110 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 2.6e-16 89.4 131 40.5
BcaC06g33976 Brassica carinata HOM05D007408 ORTHO05D009325 4.5e-16 88.6 131 42.7
BraA02t08410Z Brassica rapa HOM05D007408 ORTHO05D009325 4.5e-16 88.6 137 38.0
THA.LOC104805235 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 4.5e-16 88.6 143 40.6
A02p33920 Brassica napus HOM05D007408 ORTHO05D009325 5.9e-16 88.2 130 40.0
C07p34420 Brassica napus HOM05D007408 ORTHO05D009325 5.9e-16 88.2 132 42.4
CARHR061510 Cardamine hirsuta HOM05D007408 ORTHO05D009325 1.0e-15 87.4 113 42.5
Peaxi162Scf00198g00024 Petunia axillaris HOM05D007408 ORTHO05D009325 1.7e-15 86.7 114 39.5
PSO782G1144 Papaver somniferum HOM05D007408 ORTHO05D009325 8.5e-15 84.3 145 41.4
BcaB07g30265 Brassica carinata HOM05D007408 ORTHO05D009325 1.5e-14 83.6 147 35.4
AT1G68700 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 1.9e-14 83.2 113 37.2
Carub.0005s0338 Capsella rubella HOM05D007408 ORTHO05D009325 3.2e-14 82.4 146 36.3
Carub.0001s2482 Capsella rubella HOM05D007408 ORTHO05D009325 4.2e-14 82.0 115 40.0
HanXRQChr12g0365241 Helianthus annuus HOM05D007408 ORTHO05D009325 7.2e-14 81.3 147 36.1
AT1G26140 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 2.7e-13 79.3 117 37.6
AL1G39610 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 4.7e-13 78.6 117 41.0
Carub.0002s1524 Capsella rubella HOM05D007408 ORTHO05D009325 2.3e-12 76.3 105 39.0
Aqoxy3G03838 Aquilegia oxysepala HOM05D007408 ORTHO05D009325 5.2e-12 75.1 147 34.0
C03p72700 Brassica napus HOM05D007408 ORTHO05D009325 5.2e-12 75.1 120 40.8
BolC3t19568H Brassica oleracea HOM05D007408 ORTHO05D009325 5.2e-12 75.1 120 40.8
Manes.14G095101 Manihot esculenta HOM05D007408 ORTHO05D009325 5.2e-12 75.1 71 53.5
A08p27160 Brassica napus HOM05D007408 ORTHO05D009325 6.7e-12 74.7 120 40.8
Sp1g22520 Schrenkiella parvula HOM05D007408 ORTHO05D009325 6.7e-12 74.7 124 37.9
CARHR025780 Cardamine hirsuta HOM05D007408 ORTHO05D009325 8.8e-12 74.3 117 39.3
BcaB03g15446 Brassica carinata HOM05D007408 ORTHO05D009325 2.6e-11 72.8 136 31.6
BcaC05g26429 Brassica carinata HOM05D007408 ORTHO05D009325 2.6e-11 72.8 121 38.0
MELO3C020393.2 Cucumis melo HOM05D007408 ORTHO05D009325 3.3e-11 72.4 142 36.6
BcaC08g46321 Brassica carinata HOM05D000085 ORTHO05D000274 4.4e-11 72.0 151 34.4
C05p24760 Brassica napus HOM05D007408 ORTHO05D009325 4.4e-11 72.0 121 38.0
BolC6t39308H Brassica oleracea HOM05D000085 ORTHO05D000274 4.4e-11 72.0 151 34.4
BcaB03g15828 Brassica carinata HOM05D007408 ORTHO05D009325 5.7e-11 71.6 117 35.0
C06p41170 Brassica napus HOM05D000085 ORTHO05D000274 5.7e-11 71.6 151 33.8
A07p31850 Brassica napus HOM05D007408 ORTHO05D009325 1.3e-10 70.5 139 33.8
A07p35100 Brassica napus HOM05D000085 ORTHO05D000274 1.7e-10 70.1 114 38.6
BraA07t31103Z Brassica rapa HOM05D000085 ORTHO05D000274 1.7e-10 70.1 114 38.6
BraA07t30814Z Brassica rapa HOM05D007408 ORTHO05D009325 2.2e-10 69.7 139 33.8
Thhalv10009687m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 2.8e-10 69.3 112 35.7
BraA08t34661Z Brassica rapa HOM05D007408 ORTHO05D009325 4.8e-10 68.6 117 35.0
Sp5g23800 Schrenkiella parvula HOM05D007408 ORTHO05D009325 1.1e-09 67.4 113 32.7
Nitab4.5_0010987g0020 Nicotiana tabacum HOM05D007408 ORTHO05D009325 1.8e-09 66.6 58 48.3
A09p39710 Brassica napus HOM05D007408 ORTHO05D009325 7.0e-09 64.7 120 35.0
BraA09t39470Z Brassica rapa HOM05D007408 ORTHO05D009325 7.0e-09 64.7 120 35.0
PSO063G0414 Papaver somniferum HOM05D007408 ORTHO05D009325 9.1e-09 64.3 149 36.9
C06p37420 Brassica napus HOM05D007408 ORTHO05D009325 1.2e-08 63.9 112 34.8
BolC7t43970H Brassica oleracea HOM05D007408 ORTHO05D009325 3.5e-08 62.4 104 40.4
ECA246G0813 Erigeron canadensis HOM05D000085 ORTHO05D000274 6.5e-07 58.2 94 42.6
BolC6t38845H Brassica oleracea HOM05D000085 ORTHO05D000274 1.1e-06 57.4 108 34.3
Lsat_1_v5_gn_8_37901 Lactuca sativa HOM05D007408 ORTHO05D009325 7.2e-06 54.7 114 32.5


User provided reference genes

Program Settings