Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024066.2 Olea europaea HOM05D005853 ORTHO05D007308 3.1e-100 368.6 206 100.0
Migut.I00880 Erythranthe guttata HOM05D005853 ORTHO05D007308 5.4e-20 102.1 180 41.1
HanXRQChr09g0239771 Helianthus annuus HOM05D005853 ORTHO05D007308 8.6e-18 94.7 161 39.8
MSTRG.22678 Avicennia marina HOM05D005853 ORTHO05D007308 7.3e-17 91.7 208 45.7
MSTRG.11072 Avicennia marina HOM05D005853 ORTHO05D007308 4.0e-15 85.9 211 43.6
Oeu033499.2 Olea europaea HOM05D005853 ORTHO05D007308 8.9e-15 84.7 170 46.5
SGA_v2.0_scaffold5G02572 Striga asiatica HOM05D005853 ORTHO05D007308 8.9e-15 84.7 179 39.1
Cpa.g.sc23.111 Carica papaya HOM05D005853 ORTHO05D007308 2.0e-14 83.6 155 38.1
VMungo0331G1451 Vigna mungo HOM05D005853 ORTHO05D007308 7.5e-14 81.6 115 44.3
Glyma.08G205900 Glycine max HOM05D005853 ORTHO05D007308 2.9e-13 79.7 180 40.0
Lsat_1_v5_gn_7_40661 Lactuca sativa HOM05D005853 ORTHO05D007308 3.7e-13 79.3 191 39.3
Phvul.010G149900 Phaseolus vulgaris HOM05D005853 ORTHO05D007308 4.9e-13 79.0 118 42.4
TAR636G2025 Trochodendron aralioides HOM05D005853 ORTHO05D007308 6.4e-13 78.6 125 41.6
CiPaw.04G164300 Carya illinoinensis HOM05D005853 ORTHO05D007308 8.3e-13 78.2 211 40.8
Manes.03G020200 Manihot esculenta HOM05D005853 ORTHO05D007308 8.3e-13 78.2 125 37.6
MBI13_g01620_MAGBIO Magnolia biondii HOM05D005853 ORTHO05D007308 1.4e-12 77.4 145 49.7
THA.LOC104808760 Tarenaya hassleriana HOM05D005853 ORTHO05D007308 2.4e-12 76.6 157 37.6
A06p34130 Brassica napus HOM05D005853 ORTHO05D007308 4.1e-12 75.9 130 37.7
BraA06t26346Z Brassica rapa HOM05D005853 ORTHO05D007308 4.1e-12 75.9 130 37.7
Gohir.D05G024400 Gossypium hirsutum HOM05D005853 ORTHO05D007308 4.1e-12 75.9 115 40.0
Manes.16G116400 Manihot esculenta HOM05D005853 ORTHO05D007308 4.1e-12 75.9 151 43.7
Gorai.009G024500 Gossypium raimondii HOM05D005853 ORTHO05D007308 7.0e-12 75.1 143 49.0
BcaC01g02942 Brassica carinata HOM05D005853 ORTHO05D007308 9.2e-12 74.7 160 35.0
C03p58060 Brassica napus HOM05D005853 ORTHO05D007308 9.2e-12 74.7 160 35.0
BolC3t18080H Brassica oleracea HOM05D005853 ORTHO05D007308 9.2e-12 74.7 160 35.0
BraA07t28175Z Brassica rapa HOM05D005853 ORTHO05D007308 9.2e-12 74.7 178 33.7
PGR102G0312 Punica granatum HOM05D005853 ORTHO05D007308 9.2e-12 74.7 186 41.9
BcaB03g16471 Brassica carinata HOM05D005853 ORTHO05D007308 1.2e-11 74.3 177 35.0
BcaC06g36242 Brassica carinata HOM05D005853 ORTHO05D007308 1.2e-11 74.3 177 33.9
C07p06090 Brassica napus HOM05D005853 ORTHO05D007308 1.2e-11 74.3 177 33.9
BolC7t41022H Brassica oleracea HOM05D005853 ORTHO05D007308 1.2e-11 74.3 177 33.9
Haze_25712 Corylus avellana HOM05D005853 ORTHO05D007308 1.6e-11 73.9 160 43.8
Sp3g30580 Schrenkiella parvula HOM05D005853 ORTHO05D007308 2.0e-11 73.6 130 36.9
ECA240G1876 Erigeron canadensis HOM05D005853 ORTHO05D007308 2.7e-11 73.2 111 40.5
THA.LOC104804586 Tarenaya hassleriana HOM05D005853 ORTHO05D007308 3.5e-11 72.8 184 32.6
Lj3g0010943 Lotus japonicus HOM05D005853 ORTHO05D007308 6.0e-11 72.0 140 47.1
Aa31LG8G14610 Aethionema arabicum HOM05D005853 ORTHO05D007308 7.8e-11 71.6 122 36.9
A07p03810 Brassica napus HOM05D005853 ORTHO05D007308 7.8e-11 71.6 177 33.3
QL02p085450 Quercus lobata HOM05D005853 ORTHO05D007308 7.8e-11 71.6 159 43.4
Sopen04g003890 Solanum pennellii HOM05D005853 ORTHO05D007308 1.3e-10 70.9 124 37.9
Carub.0003s3118 Capsella rubella HOM05D005853 ORTHO05D007308 1.7e-10 70.5 118 37.3
Gohir.D05G024300 Gossypium hirsutum HOM05D005853 ORTHO05D007308 1.7e-10 70.5 114 42.1
Nitab4.5_0001983g0030 Nicotiana tabacum HOM05D005853 ORTHO05D007308 1.7e-10 70.5 211 40.8
AL3G50100 Arabidopsis lyrata HOM05D005853 ORTHO05D007308 3.0e-10 69.7 111 38.7
CDE04G2734 Ceratophyllum demersum HOM05D005853 ORTHO05D007308 3.9e-10 69.3 111 41.4
Gohir.A05G022800 Gossypium hirsutum HOM05D005853 ORTHO05D007308 3.9e-10 69.3 114 41.2
Ah.01g021430 Amaranthus hybridus HOM05D005853 ORTHO05D007308 5.0e-10 68.9 166 34.3
CSS0027693 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 5.0e-10 68.9 111 39.6
Duzib150G0727 Durio zibethinus HOM05D005853 ORTHO05D007308 8.6e-10 68.2 116 37.9
Potri.018G079700 Populus trichocarpa HOM05D005853 ORTHO05D007308 8.6e-10 68.2 111 37.8
Thecc.06G089900 Theobroma cacao HOM05D005853 ORTHO05D007308 8.6e-10 68.2 162 42.0
Ciclev10009718m.g Citrus clementina HOM05D005853 ORTHO05D007308 3.3e-09 66.2 196 32.7
Pp3c2_3480 Physcomitrium patens HOM05D005853 ORTHO05D007308 3.3e-09 66.2 175 38.9
Aqoxy7G03791 Aquilegia oxysepala HOM05D005853 ORTHO05D007308 4.3e-09 65.9 178 33.7
CSS0003127 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 5.6e-09 65.5 174 35.6
Gorai.009G024400 Gossypium raimondii HOM05D005853 ORTHO05D007308 5.6e-09 65.5 161 36.0
Pp3c1_36270 Physcomitrium patens HOM05D005853 ORTHO05D007308 5.6e-09 65.5 136 44.9
MELO3C025336.2 Cucumis melo HOM05D005853 ORTHO05D007308 9.5e-09 64.7 207 40.6
TAR624G1380 Trochodendron aralioides HOM05D005853 ORTHO05D007308 9.5e-09 64.7 203 41.9
SalBow2G1576 Salvia bowleyana HOM05D005853 ORTHO05D007308 1.2e-08 64.3 159 35.8
HPP92_004788 Vanilla planifolia HOM05D005853 ORTHO05D007308 1.2e-08 64.3 36 91.7
CSS0011641 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 1.6e-08 63.9 174 35.1
Gohir.A05G022900 Gossypium hirsutum HOM05D005853 ORTHO05D007308 2.8e-08 63.2 190 39.5
Gohir.A06G062400 Gossypium hirsutum HOM05D005853 ORTHO05D007308 2.8e-08 63.2 117 35.9
Gohir.D06G060700 Gossypium hirsutum HOM05D005853 ORTHO05D007308 2.8e-08 63.2 116 36.2
Gorai.010G070700 Gossypium raimondii HOM05D005853 ORTHO05D007308 2.8e-08 63.2 116 36.2
Psat7g250480 Pisum sativum HOM05D005853 ORTHO05D007308 2.8e-08 63.2 104 38.5
Oeu033500.1 Olea europaea HOM05D005853 ORTHO05D007308 3.6e-08 62.8 62 80.6
Sabra18G0067400 Salix brachista HOM05D005853 ORTHO05D007308 4.7e-08 62.4 33 78.8
Solyc04g008710.4 Solanum lycopersicum HOM05D005853 ORTHO05D007308 4.7e-08 62.4 174 35.6
ClCG06G008520 Citrullus lanatus HOM05D005853 ORTHO05D007308 8.1e-08 61.6 191 39.8
Eucgr.J02982 Eucalyptus grandis HOM05D005853 ORTHO05D007308 8.1e-08 61.6 132 38.6
COL.COLO4_34918 Corchorus olitorius HOM05D005853 ORTHO05D007308 1.1e-07 61.2 190 37.9
AT2G17240 Arabidopsis thaliana HOM05D005853 ORTHO05D007308 1.4e-07 60.8 175 31.4
CDE07G2010 Ceratophyllum demersum HOM05D005853 ORTHO05D007308 1.4e-07 60.8 111 38.7
Thhalv10022893m.g Eutrema salsugineum HOM05D005853 ORTHO05D007308 1.8e-07 60.5 171 33.9
Nn2g11754 Nelumbo nucifera HOM05D005853 ORTHO05D007308 1.8e-07 60.5 143 45.5
GSVIVG01015393001 Vitis vinifera HOM05D005853 ORTHO05D007308 1.8e-07 60.5 140 44.3
Gohir.A08G241100 Gossypium hirsutum HOM05D005853 ORTHO05D007308 2.3e-07 60.1 203 35.5
Lsat_1_v5_gn_8_95440 Lactuca sativa HOM05D005853 ORTHO05D007308 2.3e-07 60.1 150 30.0
ATR0724G055 Amborella trichopoda HOM05D005853 ORTHO05D007308 3.1e-07 59.7 137 32.8
Glyma.07G005500 Glycine max HOM05D005853 ORTHO05D007308 3.1e-07 59.7 202 42.6
TWI34G0492 Tripterygium wilfordii HOM05D005853 ORTHO05D007308 3.1e-07 59.7 173 31.8
GSVIVG01017090001 Vitis vinifera HOM05D005853 ORTHO05D007308 3.1e-07 59.7 137 46.7
Cc04_g03260 Coffea canephora HOM05D005853 ORTHO05D007308 4.0e-07 59.3 171 34.5
unitig_22.g5469 Utricularia gibba HOM05D005853 ORTHO05D007308 4.0e-07 59.3 163 33.7
Peaxi162Scf00329g00432 Petunia axillaris HOM05D005853 ORTHO05D007308 5.2e-07 58.9 202 38.1
Prupe.7G230800 Prunus persica HOM05D005853 ORTHO05D007308 6.8e-07 58.5 100 36.0
RcHm_v2.0_Chr2g0090481 Rosa chinensis HOM05D005853 ORTHO05D007308 2.6e-06 56.6 142 29.6
Duzib187G1793 Durio zibethinus HOM05D005853 ORTHO05D007308 3.4e-06 56.2 100 35.0
PGR102G2925 Punica granatum HOM05D005853 ORTHO05D007308 3.4e-06 56.2 99 37.4
FAN19G0481 Fragaria x ananassa HOM05D000050 ORTHO05D009634 4.4e-06 55.8 100 37.0
Hma1.2p1_1455F.1_g284500 Hydrangea macrophylla HOM05D005853 ORTHO05D007308 4.4e-06 55.8 173 32.4
Nitab4.5_0000129g0220 Nicotiana tabacum HOM05D005853 ORTHO05D007308 4.4e-06 55.8 211 38.4
Thecc.09G110800 Theobroma cacao HOM05D005853 ORTHO05D007308 4.4e-06 55.8 159 31.4
Oeu063954.1 Olea europaea HOM05D005853 ORTHO05D007308 7.5e-06 55.1 87 48.3
MD02G1047200 Malus domestica HOM05D005853 ORTHO05D007308 9.9e-06 54.7 134 31.3
Sed0009205 Sechium edule HOM05D005853 ORTHO05D007308 9.9e-06 54.7 138 41.3
Sc12g0009330 Simmondsia chinensis HOM05D005853 ORTHO05D007308 9.9e-06 54.7 97 36.1


User provided reference genes

Program Settings