Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 3.6e-83 311.6 164 100.0
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 5.1e-21 105.1 162 46.9
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 2.1e-19 99.8 162 47.5
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 3.1e-18 95.9 172 47.1
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 3.4e-17 92.4 161 44.1
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 5.8e-17 91.7 171 44.4
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 2.7e-14 82.8 162 42.6
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.3e-13 80.5 163 40.5
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 5.1e-13 78.6 158 44.9
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 6.6e-13 78.2 163 40.5
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 8.7e-13 77.8 158 43.0
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 2.5e-12 76.3 158 39.2
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 3.3e-12 75.9 160 45.0
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 5.6e-12 75.1 169 39.6
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 1.2e-11 73.9 160 39.4
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 1.6e-11 73.6 161 43.5
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 2.1e-11 73.2 167 37.7
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 2.8e-11 72.8 159 40.3
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 4.7e-11 72.0 160 41.9
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 6.2e-11 71.6 161 42.9
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 1.8e-10 70.1 181 40.9
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.8e-10 70.1 158 41.1
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 3.1e-10 69.3 161 38.5
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 6.9e-10 68.2 163 39.3
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.5e-09 67.0 157 40.1
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 2.0e-09 66.6 160 36.9
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 2.0e-09 66.6 162 40.1
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.6e-09 66.2 162 40.1
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 3.4e-09 65.9 159 40.9
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 9.9e-09 64.3 155 38.7
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 1.3e-08 63.9 168 37.5
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 1.7e-08 63.5 161 36.0
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 1.7e-08 63.5 158 36.7
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 4.9e-08 62.0 160 38.1
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 8.4e-08 61.2 161 37.9
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.4e-07 60.5 164 37.2
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.4e-07 60.5 164 37.2
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 1.4e-07 60.5 89 46.1
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 1.9e-07 60.1 122 44.3
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 2.4e-07 59.7 168 36.9
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 3.2e-07 59.3 174 36.8
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 4.2e-07 58.9 158 37.3
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 4.2e-07 58.9 171 37.4
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 5.4e-07 58.5 163 38.7
Lsat_1_v5_gn_3_30061 Lactuca sativa HOM05D007617 ORTHO05D007195 7.1e-07 58.2 149 37.6
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 1.2e-06 57.4 158 35.4
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 1.2e-06 57.4 161 37.3
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 2.1e-06 56.6 158 36.7
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 2.7e-06 56.2 162 37.0
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 3.5e-06 55.8 153 32.7
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 4.6e-06 55.5 163 35.0
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 6.0e-06 55.1 90 44.4
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 6.0e-06 55.1 133 37.6


User provided reference genes

Program Settings