Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 1.6e-42 175.6 85 100.0
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 1.5e-29 132.5 90 75.6
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 4.8e-15 84.3 82 54.9
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 2.5e-11 72.0 90 46.7
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 4.2e-11 71.2 93 44.1
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.0e-09 66.6 85 45.9
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 1.4e-09 66.2 88 46.6
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.8e-09 65.9 92 44.6
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 2.3e-09 65.5 88 48.9
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 5.1e-09 64.3 84 42.9
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 6.7e-09 63.9 93 41.9
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 3.3e-08 61.6 99 43.4
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 3.3e-08 61.6 91 44.0
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 5.7e-08 60.8 87 47.1
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 7.4e-08 60.5 91 41.8
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 9.7e-08 60.1 97 43.3
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 1.7e-07 59.3 94 35.1
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.2e-07 58.9 87 43.7
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.2e-07 58.9 87 43.7
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 2.2e-07 58.9 87 43.7
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 2.2e-07 58.9 86 40.7
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 2.2e-07 58.9 86 40.7
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 2.8e-07 58.5 82 40.2
Rhsim02G0253700 Rhododendron simsii HOM05D008613 ORTHO05D006961 2.8e-07 58.5 79 45.6
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 2.8e-07 58.5 94 41.5
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.7e-07 58.2 102 37.3
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 3.7e-07 58.2 80 43.8
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 3.7e-07 58.2 86 44.2
Ah.13g070730 Amaranthus hybridus HOM05D008613 ORTHO05D011237 6.3e-07 57.4 88 42.0
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 6.3e-07 57.4 83 39.8
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.3e-07 57.4 82 42.7
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.3e-07 57.4 82 42.7
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 6.3e-07 57.4 86 39.5
Thhalv10009742m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 8.2e-07 57.0 82 39.0
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 8.2e-07 57.0 82 42.7
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 8.2e-07 57.0 82 42.7
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 8.2e-07 57.0 86 39.5
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 8.2e-07 57.0 98 42.9
EL10Ac3g05184 Beta vulgaris HOM05D008613 ORTHO05D006961 1.1e-06 56.6 92 40.2
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 1.1e-06 56.6 82 42.7
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 1.4e-06 56.2 86 45.3
Migut.F00155 Erythranthe guttata HOM05D059867 ORTHO05D011237 1.4e-06 56.2 89 39.3
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.4e-06 56.2 86 44.2
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 1.4e-06 56.2 86 39.5
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.4e-06 56.2 101 37.6
Lsat_1_v5_gn_8_4480 Lactuca sativa HOM05D011561 ORTHO05D011237 1.8e-06 55.8 75 41.3
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.8e-06 55.8 85 42.4
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.8e-06 55.8 85 42.4
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.8e-06 55.8 85 42.4
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 1.8e-06 55.8 90 42.2
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.4e-06 55.5 81 44.4
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 2.4e-06 55.5 81 44.4
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 3.1e-06 55.1 110 41.8
Manes.01G055100 Manihot esculenta HOM05D008613 ORTHO05D006961 3.1e-06 55.1 80 45.0
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 4.1e-06 54.7 94 39.4
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 4.1e-06 54.7 89 40.4
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 4.1e-06 54.7 95 36.8
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 5.3e-06 54.3 84 40.5
Sopen03g022070 Solanum pennellii HOM05D008837 ORTHO05D006961 5.3e-06 54.3 98 41.8
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 6.9e-06 53.9 82 37.8
Nn1g00438 Nelumbo nucifera HOM05D008613 ORTHO05D006961 6.9e-06 53.9 86 45.3
Sp1g28080 Schrenkiella parvula HOM05D008703 ORTHO05D006961 6.9e-06 53.9 82 37.8
AL6G44550 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 9.1e-06 53.5 83 38.6
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 9.1e-06 53.5 88 36.4


User provided reference genes

Program Settings