Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023621.1 Olea europaea HOM05D004825 ORTHO05D005415 8.2e-166 587.0 306 100.0
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 2.8e-105 386.0 304 65.1
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 1.9e-101 373.2 303 63.4
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 9.2e-101 370.9 306 61.4
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 1.7e-99 366.7 301 65.1
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 5.1e-99 365.2 301 63.8
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 2.1e-97 359.8 304 60.5
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 1.8e-96 356.7 304 60.9
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 3.4e-95 352.4 304 60.5
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 5.8e-95 351.7 304 59.5
FvH4_6g00770 Fragaria vesca HOM05D004825 ORTHO05D005415 7.6e-95 351.3 306 59.2
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 7.6e-95 351.3 306 59.2
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 7.6e-95 351.3 306 57.8
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 9.9e-95 350.9 304 60.5
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 1.7e-94 350.1 304 59.9
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 2.9e-94 349.4 306 60.8
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 3.8e-94 349.0 305 62.3
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 2.4e-93 346.3 304 58.6
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.6e-92 343.6 306 58.2
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 1.6e-92 343.6 295 61.4
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 3.5e-92 342.4 323 57.3
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 6.0e-92 341.7 308 58.8
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 1.3e-91 340.5 306 57.2
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 6.6e-91 338.2 306 57.2
SalBow6G3714 Salvia bowleyana HOM05D004825 ORTHO05D005415 3.3e-90 335.9 299 58.5
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 9.6e-90 334.3 306 57.2
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 2.1e-89 333.2 307 58.3
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 1.1e-88 330.9 329 54.1
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 1.8e-88 330.1 305 57.0
Solyc11g018740.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 3.1e-88 329.3 317 56.5
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 1.5e-87 327.0 304 56.9
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 2.0e-87 326.6 304 55.3
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 3.8e-86 322.4 304 54.3
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 6.4e-86 321.6 308 56.2
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 1.4e-85 320.5 304 58.2
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 3.2e-85 319.3 289 57.4
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 1.6e-84 317.0 304 54.6
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 4.6e-84 315.5 304 54.9
ECA233G4148 Erigeron canadensis HOM05D004825 ORTHO05D005415 5.1e-83 312.0 304 52.3
Peaxi162Scf01013g00123 Petunia axillaris HOM05D004825 ORTHO05D005415 8.7e-83 311.2 304 55.9
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 3.3e-82 309.3 270 58.9
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 6.2e-81 305.1 304 53.6
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 2.0e-79 300.1 305 52.1
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 2.0e-79 300.1 292 52.1
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 2.2e-78 296.6 292 57.2
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 4.9e-78 295.4 304 54.3
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 4.9e-78 295.4 304 54.3
Potri.009G121800 Populus trichocarpa HOM05D004825 ORTHO05D005415 7.1e-77 291.6 283 54.1
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 1.6e-76 290.4 296 52.7
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 7.9e-76 288.1 321 49.8
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 3.9e-75 285.8 300 51.0
Rhsim10G0138100 Rhododendron simsii HOM05D004825 ORTHO05D005415 3.9e-75 285.8 255 60.0
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 6.7e-75 285.0 304 51.3
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 8.7e-75 284.6 328 48.2
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 5.6e-74 282.0 322 50.3
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 7.4e-74 281.6 303 49.8
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 2.1e-73 280.0 321 49.8
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 3.7e-73 279.3 302 48.7
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 3.7e-73 279.3 327 49.2
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 6.2e-73 278.5 324 47.8
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 1.8e-72 276.9 302 48.7
PSO017G3896 Papaver somniferum HOM05D004825 ORTHO05D005415 1.8e-72 276.9 292 50.7
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 2.4e-72 276.6 302 48.0
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 2.4e-72 276.6 301 54.2
AL5G22510 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 4.0e-72 275.8 291 50.2
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 4.0e-72 275.8 291 50.2
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 5.3e-72 275.4 302 48.3
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 5.3e-72 275.4 302 48.7
BcaC03g14674 Brassica carinata HOM05D004825 ORTHO05D005415 6.9e-72 275.0 302 48.3
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 6.9e-72 275.0 302 48.3
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 6.9e-72 275.0 302 48.3
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 6.9e-72 275.0 300 50.7
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 6.9e-72 275.0 287 50.5
Gohir.A09G053766 Gossypium hirsutum HOM05D004825 ORTHO05D005415 6.9e-72 275.0 274 55.1
QL02p047766 Quercus lobata HOM05D004825 ORTHO05D005415 6.9e-72 275.0 235 61.3
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 1.5e-71 273.9 295 49.8
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 1.5e-71 273.9 295 49.8
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 1.5e-71 273.9 295 49.8
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 2.6e-71 273.1 302 48.0
Psat3g104280 Pisum sativum HOM05D004825 ORTHO05D005415 2.6e-71 273.1 324 47.8
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 5.8e-71 271.9 306 48.0
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 1.0e-70 271.2 313 47.9
Nitab4.5_0000167g0020 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.0e-70 271.2 236 61.0
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 1.3e-70 270.8 306 49.3
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 1.3e-70 270.8 302 47.7
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 2.2e-70 270.0 291 49.8
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 2.9e-70 269.6 300 48.0
vmacro12851 Vaccinium macrocarpon HOM05D004825 ORTHO05D005415 1.1e-69 267.7 235 60.0
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 1.4e-69 267.3 315 48.6
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 3.2e-69 266.2 322 46.0
Sp5g19610 Schrenkiella parvula HOM05D004825 ORTHO05D005415 3.2e-69 266.2 301 47.2
SpUn0108_0010 Schrenkiella parvula HOM05D004825 ORTHO05D005415 3.2e-69 266.2 301 47.2
Nitab4.5_0004158g0040 Nicotiana tabacum HOM05D004825 ORTHO05D005415 4.2e-69 265.8 239 59.4
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 7.1e-69 265.0 300 49.3
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 2.1e-68 263.5 295 48.8
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 6.0e-68 261.9 295 48.5
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 1.0e-67 261.2 304 47.4
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 1.0e-67 261.2 322 45.0
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 8.7e-67 258.1 289 49.8
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 2.1e-65 253.4 285 48.4
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 3.7e-65 252.7 291 47.8
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 1.4e-64 250.8 298 49.0
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 4.6e-60 235.7 298 45.0
unitig_32.g11006 Utricularia gibba HOM05D004825 ORTHO05D005415 1.1e-58 231.1 302 44.4
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 4.3e-58 229.2 315 44.4
Ca_07963_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 2.8e-57 226.5 269 48.7
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 1.1e-56 224.6 291 43.6
COL.COLO4_07810 Corchorus olitorius HOM05D004825 ORTHO05D005415 3.4e-55 219.5 187 62.6
ClCG11G007410 Citrullus lanatus HOM05D004825 ORTHO05D005415 1.7e-54 217.2 240 52.5
Sabra09G0094100 Salix brachista HOM05D004825 ORTHO05D005415 3.6e-52 209.5 218 53.2
Sopen11g007800 Solanum pennellii HOM05D004825 ORTHO05D005415 1.1e-50 204.5 187 57.2
Solyc11g013080.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 1.2e-47 194.5 158 62.0
ATR0582G066 Amborella trichopoda HOM05D004825 ORTHO05D005415 5.0e-46 189.1 291 36.4
Cpa.g.sc18.189 Carica papaya HOM05D004825 ORTHO05D005415 8.5e-46 188.3 188 54.3
Zm00001eb375410 Zea mays HOM05D004825 ORTHO05D005415 2.3e-43 180.3 314 38.5
MD12G1258500 Malus domestica HOM05D004825 ORTHO05D005415 8.8e-43 178.3 217 47.0
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 1.7e-41 174.1 245 42.0
CARHR056570 Cardamine hirsuta HOM05D004825 ORTHO05D005415 3.8e-38 162.9 172 53.5
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 8.5e-38 161.8 287 36.9
SEGI_16462 Sequoiadendron giganteum HOM05D004825 ORTHO05D005415 3.5e-31 139.8 289 32.9
AagrBONN_evm.TU.Sc2ySwM_340.165 Anthoceros agrestis HOM05D004825 ORTHO05D005415 2.1e-28 130.6 285 29.8
Mapoly0072s0017 Marchantia polymorpha HOM05D004825 ORTHO05D005415 1.6e-23 114.4 289 28.0
PGSC0003DMG400018032 Solanum tuberosum HOM05D004825 ORTHO05D005415 6.5e-22 109.0 88 59.1
PGSC0003DMG401000916 Solanum tuberosum HOM05D004825 ORTHO05D005415 6.5e-22 109.0 83 62.7
SGA_v2.0_scaffold71G24001 Striga asiatica HOM05D004825 ORTHO05D005415 7.2e-21 105.5 276 35.5
Cpa.g.c33279 Carica papaya HOM05D004825 ORTHO05D005415 8.0e-20 102.1 87 57.5
PGSC0003DMG400014032 Solanum tuberosum HOM05D004825 ORTHO05D005415 1.0e-19 101.7 83 59.0
Pp3c8_14790 Physcomitrium patens HOM05D004825 ORTHO05D005415 7.0e-16 89.0 179 29.6
Glyma.09G252466 Glycine max HOM05D004825 ORTHO05D005415 1.0e-11 75.1 81 51.9
Nitab4.5_0000188g0370 Nicotiana tabacum HOM05D004825 ORTHO05D005415 6.8e-11 72.4 121 38.8
QL02p047782 Quercus lobata HOM05D004825 ORTHO05D005415 9.2e-08 62.0 53 54.7


User provided reference genes

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