Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023579.1 Olea europaea HOM05D004316 ORTHO05D005149 1.8e-263 912.1 487 100.0
Oeu033010.1 Olea europaea HOM05D004316 ORTHO05D005149 3.0e-218 761.9 495 82.0
MSTRG.19858 Avicennia marina HOM05D004316 ORTHO05D005149 1.4e-151 540.4 492 63.6
CSS0028183 Camellia sinensis var. sinensis HOM05D004316 ORTHO05D005149 2.2e-144 516.5 518 61.0
MSTRG.6426 Avicennia marina HOM05D004316 ORTHO05D005149 4.5e-142 508.8 493 59.2
Migut.J01754 Erythranthe guttata HOM05D004316 ORTHO05D005149 8.0e-139 498.0 389 67.9
Dinv12489 Davidia involucrata HOM05D004316 ORTHO05D005149 2.2e-136 490.0 503 58.1
SalBow6G3548 Salvia bowleyana HOM05D004316 ORTHO05D005149 2.3e-130 469.9 479 57.4
Lju124C42T7 Lonicera japonica HOM05D004316 ORTHO05D005149 2.6e-129 466.5 514 53.5
Peaxi162Scf00130g00012 Petunia axillaris HOM05D004316 ORTHO05D005149 4.8e-128 462.2 475 56.8
Cc06_g17600 Coffea canephora HOM05D004316 ORTHO05D005149 2.0e-126 456.8 468 58.3
DCAR_013604 Daucus carota HOM05D004316 ORTHO05D005149 2.0e-126 456.8 488 53.3
Potri.006G050100 Populus trichocarpa HOM05D004316 ORTHO05D005149 5.4e-119 432.2 532 51.5
Dinv39612 Davidia involucrata HOM05D004316 ORTHO05D005149 3.5e-118 429.5 383 62.7
Lsat_1_v5_gn_9_29201 Lactuca sativa HOM05D004316 ORTHO05D005149 3.3e-116 422.9 492 51.4
Potri.016G056300 Populus trichocarpa HOM05D004316 ORTHO05D005149 3.3e-116 422.9 533 50.5
QL07p000671 Quercus lobata HOM05D004316 ORTHO05D005149 3.6e-115 419.5 511 51.9
CiPaw.09G038700 Carya illinoinensis HOM05D004316 ORTHO05D005149 1.8e-114 417.2 528 49.4
Duzib152G0001 Durio zibethinus HOM05D004316 ORTHO05D005149 2.3e-114 416.8 501 50.9
Sabra16G0058800 Salix brachista HOM05D004316 ORTHO05D005149 2.3e-114 416.8 529 48.6
PGR004G2076 Punica granatum HOM05D004316 ORTHO05D005149 1.5e-113 414.1 506 49.6
Cfa016810 Carpinus fangiana HOM05D004316 ORTHO05D005149 3.4e-113 412.9 526 48.9
Thecc.05G152800 Theobroma cacao HOM05D004316 ORTHO05D005149 4.4e-113 412.5 501 49.3
COL.COLO4_28298 Corchorus olitorius HOM05D004316 ORTHO05D005149 7.5e-113 411.8 514 49.6
TWI74G1076 Tripterygium wilfordii HOM05D004316 ORTHO05D005149 7.5e-113 411.8 502 51.8
Ciclev10004677m.g Citrus clementina HOM05D004316 ORTHO05D005149 6.4e-112 408.7 567 46.2
Lsat_1_v5_gn_8_81220 Lactuca sativa HOM05D004316 ORTHO05D005149 8.3e-112 408.3 497 48.7
Nn2g15213 Nelumbo nucifera HOM05D004316 ORTHO05D005149 8.3e-112 408.3 538 48.1
Duzib093G1448 Durio zibethinus HOM05D004316 ORTHO05D005149 1.1e-111 407.9 521 48.4
Duzib128G1660 Durio zibethinus HOM05D004316 ORTHO05D005149 1.4e-111 407.5 506 48.4
Nitab4.5_0013624g0010 Nicotiana tabacum HOM05D004316 ORTHO05D005149 3.2e-111 406.4 363 59.8
Nitab4.5_0000586g0080 Nicotiana tabacum HOM05D004316 ORTHO05D005149 7.0e-111 405.2 360 59.2
Manes.09G020900 Manihot esculenta HOM05D004316 ORTHO05D005149 1.6e-110 404.1 532 50.0
Haze_19850 Corylus avellana HOM05D004316 ORTHO05D005149 3.5e-110 402.9 532 49.2
Gohir.A01G131000 Gossypium hirsutum HOM05D004316 ORTHO05D005149 1.0e-109 401.4 519 49.5
TAR633G0189 Trochodendron aralioides HOM05D004316 ORTHO05D005149 5.0e-109 399.1 516 48.1
Atru.chr1.1110 Acer truncatum HOM05D004316 ORTHO05D005149 8.6e-109 398.3 516 49.0
TAR623G0492 Trochodendron aralioides HOM05D004316 ORTHO05D005149 1.1e-108 397.9 506 48.4
PGSC0003DMG400027281 Solanum tuberosum HOM05D004316 ORTHO05D005149 2.5e-108 396.7 447 52.8
CiPaw.10G033700 Carya illinoinensis HOM05D004316 ORTHO05D005149 9.5e-108 394.8 538 46.5
Duzib106G1406 Durio zibethinus HOM05D004316 ORTHO05D005149 2.1e-107 393.7 513 47.2
ClCG04G000170 Citrullus lanatus HOM05D004316 ORTHO05D005149 2.8e-107 393.3 519 47.2
Lsat_1_v5_gn_5_161320 Lactuca sativa HOM05D004316 ORTHO05D005149 2.8e-107 393.3 488 49.0
Gorai.002G147000 Gossypium raimondii HOM05D004316 ORTHO05D005149 1.4e-106 391.0 515 49.1
Sopen04g007890 Solanum pennellii HOM05D004316 ORTHO05D005149 1.4e-106 391.0 474 52.1
HanXRQChr10g0296681 Helianthus annuus HOM05D004316 ORTHO05D005149 1.8e-106 390.6 491 49.3
Gohir.D01G120400 Gossypium hirsutum HOM05D004316 ORTHO05D005149 2.3e-106 390.2 515 49.3
Nn7g36300 Nelumbo nucifera HOM05D004316 ORTHO05D005149 6.8e-106 388.7 534 48.3
Prupe.7G058900 Prunus persica HOM05D004316 ORTHO05D005149 3.4e-105 386.3 544 47.6
SGA_v2.0_scaffold105G30405 Striga asiatica HOM05D004316 ORTHO05D005149 9.8e-105 384.8 364 56.6
MD12G1074600 Malus domestica HOM05D004316 ORTHO05D005149 1.3e-104 384.4 533 47.5
Rhsim03G0025000 Rhododendron simsii HOM05D004316 ORTHO05D005149 2.9e-104 383.3 349 60.7
Sabra06G0035000 Salix brachista HOM05D004316 ORTHO05D005149 8.3e-104 381.7 365 57.8
CsaV3_4G011650 Cucumis sativus L. HOM05D004316 ORTHO05D005149 3.2e-103 379.8 513 46.4
unitig_22.g6044 Utricularia gibba HOM05D004316 ORTHO05D005149 4.1e-103 379.4 494 46.4
SGA_v2.0_scaffold66G22353 Striga asiatica HOM05D004316 ORTHO05D005149 2.0e-102 377.1 363 56.2
CANSAT80G0327 Cannabis sativa HOM05D004316 ORTHO05D005149 6.0e-102 375.6 537 47.3
MELO3C023147.2 Cucumis melo HOM05D004316 ORTHO05D005149 1.0e-101 374.8 509 46.4
RcHm_v2.0_Chr3g0482601 Rosa chinensis HOM05D004316 ORTHO05D005149 3.9e-101 372.9 541 45.3
Sed0026358 Sechium edule HOM05D004316 ORTHO05D005149 6.6e-101 372.1 517 46.0
Aa31LG10G12240 Aethionema arabicum HOM05D004316 ORTHO05D005149 8.6e-101 371.7 498 45.4
Gohir.D11G329400 Gossypium hirsutum HOM05D004316 ORTHO05D005149 8.6e-101 371.7 491 46.0
Glyma.02G184700 Glycine max HOM05D004316 ORTHO05D005149 1.1e-100 371.3 495 48.9
FAN02G3785 Fragaria x ananassa HOM05D004316 ORTHO05D005149 9.5e-100 368.2 536 46.1
FAN05G0825 Fragaria x ananassa HOM05D004316 ORTHO05D005149 1.6e-99 367.5 550 45.1
Thhalv10006507m.g Eutrema salsugineum HOM05D004316 ORTHO05D005149 2.1e-99 367.1 498 47.6
THA.LOC104802092 Tarenaya hassleriana HOM05D004316 ORTHO05D005149 2.8e-99 366.7 492 46.5
Gorai.007G360600 Gossypium raimondii HOM05D004316 ORTHO05D005149 6.2e-99 365.5 491 45.0
Gohir.A11G312700 Gossypium hirsutum HOM05D004316 ORTHO05D005149 8.1e-99 365.2 480 45.8
Nitab4.5_0000082g0160 Nicotiana tabacum HOM05D004316 ORTHO05D005149 2.3e-98 363.6 356 56.5
Cpa.g.sc33.204 Carica papaya HOM05D004316 ORTHO05D005149 8.9e-98 361.7 466 53.0
arahy.Tifrunner.gnm1.ann1.WY7AF9 Arachis hypogaea HOM05D004316 ORTHO05D005149 2.0e-97 360.5 502 46.0
MD14G1072700 Malus domestica HOM05D004316 ORTHO05D005149 5.8e-97 359.0 529 45.7
arahy.Tifrunner.gnm1.ann1.7DG8CI Arachis hypogaea HOM05D004316 ORTHO05D005149 7.5e-97 358.6 501 46.3
FAN09G3682 Fragaria x ananassa HOM05D004316 ORTHO05D005149 8.3e-96 355.1 490 47.8
PGSC0003DMG400008166 Solanum tuberosum HOM05D004316 ORTHO05D005149 1.9e-95 354.0 464 46.1
Lalb_Chr01g0017331 Lupinus albus HOM05D004316 ORTHO05D005149 3.2e-95 353.2 488 44.9
VMungo0720G0980 Vigna mungo HOM05D004316 ORTHO05D005149 3.2e-95 353.2 473 45.5
vmacro07846 Vaccinium macrocarpon HOM05D004316 ORTHO05D005149 7.1e-95 352.1 515 45.6
TWI53G1538 Tripterygium wilfordii HOM05D004316 ORTHO05D005149 2.1e-94 350.5 355 55.2
CAN.G676.33 Capsicum annuum HOM05D004316 ORTHO05D005149 4.6e-94 349.4 449 48.1
Lalb_Chr20g0110531 Lupinus albus HOM05D004316 ORTHO05D005149 4.6e-94 349.4 500 47.0
Lj1g0001621 Lotus japonicus HOM05D004316 ORTHO05D005149 7.8e-94 348.6 480 45.0
FvH4_6g23940 Fragaria vesca HOM05D004316 ORTHO05D005149 2.3e-93 347.1 497 46.9
BcaB02g07608 Brassica carinata HOM05D004316 ORTHO05D005149 3.0e-93 346.7 501 45.1
FAN14G3684 Fragaria x ananassa HOM05D004316 ORTHO05D005149 8.6e-93 345.1 498 46.6
Manes.08G051300 Manihot esculenta HOM05D004316 ORTHO05D005149 2.5e-92 343.6 508 44.9
HanXRQChr13g0395921 Helianthus annuus HOM05D004316 ORTHO05D005149 9.5e-92 341.7 492 44.3
THA.LOC104824440 Tarenaya hassleriana HOM05D004316 ORTHO05D005149 9.5e-92 341.7 492 44.5
AT3G57400 Arabidopsis thaliana HOM05D004316 ORTHO05D005149 2.8e-91 340.1 499 46.3
CARHR167600 Cardamine hirsuta HOM05D004316 ORTHO05D005149 3.6e-91 339.7 489 44.0
Sp5g05200 Schrenkiella parvula HOM05D004316 ORTHO05D005149 3.6e-91 339.7 494 44.7
Lalb_Chr25g0287141 Lupinus albus HOM05D004316 ORTHO05D005149 6.2e-91 339.0 501 43.7
AL5G38930 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 1.4e-90 337.8 507 46.4
PSO384G0452 Papaver somniferum HOM05D004316 ORTHO05D005149 3.1e-90 336.7 537 43.8
PSO339G4967 Papaver somniferum HOM05D004316 ORTHO05D005149 2.2e-88 330.5 538 43.9
SGA_v2.0_scaffold5252G54614 Striga asiatica HOM05D004316 ORTHO05D005149 1.4e-87 327.8 305 56.4
BolC8t50893H Brassica oleracea HOM05D004316 ORTHO05D005149 2.4e-87 327.0 488 45.7
Glyma.03G136300 Glycine max HOM05D004316 ORTHO05D005149 1.3e-85 321.2 439 45.8
Eucgr.A02343 Eucalyptus grandis HOM05D004316 ORTHO05D005149 2.5e-84 317.0 484 46.1
C08p32820 Brassica napus HOM05D004316 ORTHO05D005149 4.3e-84 316.2 488 44.1
BcaC02g09937 Brassica carinata HOM05D004316 ORTHO05D005149 8.1e-83 312.0 492 43.7
C04p35000 Brassica napus HOM05D004316 ORTHO05D005149 8.1e-83 312.0 492 43.7
BolC4t25057H Brassica oleracea HOM05D004316 ORTHO05D005149 8.1e-83 312.0 492 43.7
BcaC08g44838 Brassica carinata HOM05D004316 ORTHO05D005149 1.4e-82 311.2 440 47.3
C06p24450 Brassica napus HOM05D004316 ORTHO05D005149 1.4e-82 311.2 440 47.3
BolC6t37592H Brassica oleracea HOM05D004316 ORTHO05D005149 1.4e-82 311.2 440 47.3
A09p50290 Brassica napus HOM05D004316 ORTHO05D005149 1.8e-82 310.8 492 42.9
BraA09t40480Z Brassica rapa HOM05D004316 ORTHO05D005149 1.8e-82 310.8 492 42.9
Aqoxy1G00235 Aquilegia oxysepala HOM05D004316 ORTHO05D005149 2.4e-82 310.5 437 46.0
ECA248G0930 Erigeron canadensis HOM05D004316 ORTHO05D005149 2.6e-81 307.0 407 45.5
Glyma.19G138200 Glycine max HOM05D004316 ORTHO05D005149 2.2e-80 303.9 441 44.0
Solyc10g079390.1 Solanum lycopersicum HOM05D004316 ORTHO05D005149 2.2e-80 303.9 415 44.6
A07p23380 Brassica napus HOM05D004316 ORTHO05D005149 3.8e-80 303.1 366 48.4
Ah.13g076490 Amaranthus hybridus HOM05D004316 ORTHO05D005149 1.7e-77 294.3 460 43.5
BraA07t30003Z Brassica rapa HOM05D004316 ORTHO05D005149 1.7e-77 294.3 364 47.5
BcaB02g08317 Brassica carinata HOM05D004316 ORTHO05D005149 8.7e-77 292.0 364 47.3
EL10Ac3g07095 Beta vulgaris HOM05D004316 ORTHO05D005149 1.1e-76 291.6 538 41.6
HanXRQChr05g0131861 Helianthus annuus HOM05D004316 ORTHO05D005149 4.3e-76 289.7 491 39.9
A04p03150 Brassica napus HOM05D004316 ORTHO05D005149 5.6e-76 289.3 392 43.9
Carub.0005s2424 Capsella rubella HOM05D004316 ORTHO05D005149 5.6e-76 289.3 460 43.5
Medtr7g091450 Medicago truncatula HOM05D004316 ORTHO05D005149 7.3e-76 288.9 363 48.2
Sc19g0006560 Simmondsia chinensis HOM05D004316 ORTHO05D005149 9.6e-76 288.5 520 37.5
BcaC07g40393 Brassica carinata HOM05D004316 ORTHO05D005149 1.3e-75 288.1 494 39.9
AUR62026044 Chenopodium quinoa HOM05D004316 ORTHO05D005149 1.1e-74 285.0 391 46.3
Psat3g072520 Pisum sativum HOM05D004316 ORTHO05D005149 2.4e-74 283.9 347 48.7
Ca_08453_v3 Cicer arietinum L. HOM05D004316 ORTHO05D005149 9.9e-73 278.5 316 53.2
unitig_8.g3507 Utricularia gibba HOM05D004316 ORTHO05D005149 6.4e-72 275.8 297 51.2
ECA247G0299 Erigeron canadensis HOM05D004316 ORTHO05D005149 3.2e-71 273.5 317 49.5
AUR62024455 Chenopodium quinoa HOM05D004316 ORTHO05D005149 5.4e-71 272.7 392 43.9
Actinidia39222 Actinidia chinensis HOM05D004316 ORTHO05D005149 4.6e-70 269.6 235 61.3
AT5G52500 Arabidopsis thaliana HOM05D004316 ORTHO05D005149 1.8e-69 267.7 427 40.5
VMungo1383G1866 Vigna mungo HOM05D004316 ORTHO05D005149 4.3e-68 263.1 366 44.0
Phvul.001G131600 Phaseolus vulgaris HOM05D004316 ORTHO05D005149 3.1e-66 256.9 338 46.2
Solyc04g015850.3 Solanum lycopersicum HOM05D004316 ORTHO05D005149 6.9e-66 255.8 340 49.7
TPR.G3718 Trifolium pratense HOM05D004316 ORTHO05D005149 3.9e-61 240.0 334 45.5
CDE08G1472 Ceratophyllum demersum HOM05D004316 ORTHO05D005149 1.0e-56 225.3 430 36.0
CDE09G0122 Ceratophyllum demersum HOM05D004316 ORTHO05D005149 2.2e-56 224.2 430 35.3
SEGI_13236 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 1.3e-51 208.4 529 32.7
SEGI_35991 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 1.3e-51 208.4 529 32.7
ATR0782G190 Amborella trichopoda HOM05D004316 ORTHO05D005149 2.5e-44 184.1 472 33.5
AL205U10010 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 7.9e-38 162.5 180 50.0
AL8G26960 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 3.0e-37 160.6 180 49.4
Pp3c3_2450 Physcomitrium patens HOM05D004316 ORTHO05D005149 1.5e-33 148.3 242 40.5
Pp3c13_6400 Physcomitrium patens HOM05D004316 ORTHO05D005149 2.2e-32 144.4 399 31.3
Pp3c20_13470 Physcomitrium patens HOM05D004316 ORTHO05D005149 2.9e-32 144.1 409 27.9
Pp3c8_14130 Physcomitrium patens HOM05D004316 ORTHO05D005149 5.0e-32 143.3 430 27.0
Pp3c23_16170 Physcomitrium patens HOM05D004316 ORTHO05D005149 6.5e-32 142.9 332 29.8
Pp3c5_24720 Physcomitrium patens HOM05D004316 ORTHO05D005149 6.1e-30 136.3 548 26.3
SMO201G0108 Selaginella moellendorffii HOM05D004316 ORTHO05D005149 3.9e-29 133.7 576 25.2
Mapoly0052s0060 Marchantia polymorpha HOM05D004316 ORTHO05D005149 6.7e-29 132.9 324 29.9
Mapoly0109s0039 Marchantia polymorpha HOM05D004316 ORTHO05D005149 3.3e-28 130.6 285 31.2
Actinidia39221 Actinidia chinensis HOM05D004316 ORTHO05D005149 1.3e-27 128.6 180 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2535 Anthoceros agrestis HOM05D004316 ORTHO05D005149 9.1e-26 122.5 582 25.1
GSVIVG01033262001 Vitis vinifera HOM05D004316 ORTHO05D005149 3.5e-25 120.6 126 48.4
Pp3c6_3920 Physcomitrium patens HOM05D004316 ORTHO05D005149 1.2e-20 105.5 211 31.3
SEGI_09580 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 1.2e-17 95.5 123 43.1
SEGI_40609 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 1.8e-13 81.6 103 47.6
EL10Ac6g14633 Beta vulgaris HOM05D004316 ORTHO05D005149 4.4e-12 77.0 163 38.0
Nn1g05572 Nelumbo nucifera HOM05D004316 ORTHO05D022954 5.7e-12 76.6 87 48.3
BcaC02g09938 Brassica carinata HOM05D004316 ORTHO05D005149 1.1e-10 72.4 62 59.7
Solyc10g017860.1 Solanum lycopersicum HOM05D004316 ORTHO05D005149 1.6e-09 68.6 69 47.8


User provided reference genes

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