Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023568.1 Olea europaea HOM05D005116 ORTHO05D005937 6.2e-35 150.2 74 100.0
Oeu035627.2 Olea europaea HOM05D005116 ORTHO05D005937 7.1e-15 83.6 45 86.7
Oeu044722.1 Olea europaea HOM05D005116 ORTHO05D005937 1.5e-12 75.9 43 81.4
Ciclev10015278m.g Citrus clementina HOM05D005116 ORTHO05D005937 1.9e-12 75.5 45 75.6
CiPaw.03G178700 Carya illinoinensis HOM05D005116 ORTHO05D005937 2.5e-12 75.1 45 75.6
TWI59G1245 Tripterygium wilfordii HOM05D005116 ORTHO05D005937 3.3e-12 74.7 43 74.4
Ah.09g227990 Amaranthus hybridus HOM05D005116 ORTHO05D005937 4.3e-12 74.3 43 74.4
Hund01029 Selenicereus undatus HOM05D005116 ORTHO05D005937 4.3e-12 74.3 45 71.1
Atru.chr6.2899 Acer truncatum HOM05D005116 ORTHO05D005937 5.6e-12 73.9 43 76.7
CDE02G0148 Ceratophyllum demersum HOM05D005116 ORTHO05D005937 5.6e-12 73.9 45 75.6
ECA234G2480 Erigeron canadensis HOM05D005116 ORTHO05D005937 7.4e-12 73.6 45 73.3
Gohir.A01G018800 Gossypium hirsutum HOM05D005116 ORTHO05D005937 7.4e-12 73.6 43 76.7
Gorai.002G019600 Gossypium raimondii HOM05D005116 ORTHO05D005937 7.4e-12 73.6 43 76.7
HanXRQChr16g0525341 Helianthus annuus HOM05D005116 ORTHO05D005937 7.4e-12 73.6 45 71.1
Aa31LG1G8970 Aethionema arabicum HOM05D005116 ORTHO05D005937 9.6e-12 73.2 45 73.3
PGR042G3305 Punica granatum HOM05D005116 ORTHO05D005937 9.6e-12 73.2 45 68.9
Gohir.D01G017400 Gossypium hirsutum HOM05D005116 ORTHO05D005937 1.3e-11 72.8 42 78.6
CSS0036411 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 1.6e-11 72.4 45 71.1
CSS0044850 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 1.6e-11 72.4 45 71.1
CARHR003090 Cardamine hirsuta HOM05D005116 ORTHO05D005937 1.6e-11 72.4 45 73.3
Cpa.g.sc83.62 Carica papaya HOM05D005116 ORTHO05D005937 1.6e-11 72.4 45 71.1
HanXRQChr15g0470251 Helianthus annuus HOM05D005116 ORTHO05D005937 1.6e-11 72.4 45 68.9
EL10Ac5g11143 Beta vulgaris HOM05D005116 ORTHO05D005937 2.1e-11 72.0 44 72.7
AUR62029845 Chenopodium quinoa HOM05D005116 ORTHO05D005937 2.1e-11 72.0 43 72.1
Ciclev10015471m.g Citrus clementina HOM05D005116 ORTHO05D005937 2.1e-11 72.0 45 71.1
Duzib248G1083 Durio zibethinus HOM05D005116 ORTHO05D005937 2.1e-11 72.0 43 74.4
Potri.017G012500 Populus trichocarpa HOM05D005116 ORTHO05D005937 2.1e-11 72.0 45 73.3
Sabra17G0010300 Salix brachista HOM05D005116 ORTHO05D005937 2.1e-11 72.0 45 73.3
ClCG02G017750 Citrullus lanatus HOM05D005116 ORTHO05D005937 2.8e-11 71.6 45 68.9
Duzib052G0489 Durio zibethinus HOM05D005116 ORTHO05D005937 2.8e-11 71.6 41 78.0
AL1G13310 Arabidopsis lyrata HOM05D005116 ORTHO05D005937 3.7e-11 71.2 45 71.1
AT1G03760 Arabidopsis thaliana HOM05D005116 ORTHO05D005937 3.7e-11 71.2 45 71.1
Dinv13395 Davidia involucrata HOM05D005116 ORTHO05D005937 3.7e-11 71.2 43 69.8
PSO210G2339 Papaver somniferum HOM05D005116 ORTHO05D005937 3.7e-11 71.2 45 68.9
Thecc.06G001400 Theobroma cacao HOM05D005116 ORTHO05D005937 3.7e-11 71.2 43 74.4
Cc00_g12320 Coffea canephora HOM05D005116 ORTHO05D005937 4.8e-11 70.9 45 73.3
Thhalv10007808m.g Eutrema salsugineum HOM05D005116 ORTHO05D005937 6.2e-11 70.5 45 71.1
PSO832G2322 Papaver somniferum HOM05D005116 ORTHO05D005937 6.2e-11 70.5 45 68.9
Sc09g0006700 Simmondsia chinensis HOM05D005116 ORTHO05D005937 6.2e-11 70.5 45 68.9
Carub.0001s0286 Capsella rubella HOM05D005116 ORTHO05D005937 8.1e-11 70.1 45 68.9
MD09G1244900 Malus domestica HOM05D005116 ORTHO05D005937 1.1e-10 69.7 43 69.8
THA.LOC104826035 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 1.1e-10 69.7 43 72.1
Actinidia11017 Actinidia chinensis HOM05D005116 ORTHO05D005937 1.4e-10 69.3 43 72.1
FvH4_5g30750 Fragaria vesca HOM05D005116 ORTHO05D005937 1.4e-10 69.3 43 72.1
FAN13G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 1.4e-10 69.3 43 72.1
FAN18G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 1.4e-10 69.3 43 72.1
QL08p039613 Quercus lobata HOM05D005116 ORTHO05D005937 1.4e-10 69.3 45 68.9
Sed0010367 Sechium edule HOM05D005116 ORTHO05D005937 1.4e-10 69.3 45 66.7
Lj3g0009567 Lotus japonicus HOM05D005116 ORTHO05D005937 1.8e-10 68.9 45 68.9
Manes.13G144900 Manihot esculenta HOM05D005116 ORTHO05D005937 1.8e-10 68.9 43 72.1
PSO478G3970 Papaver somniferum HOM05D005116 ORTHO05D005937 1.8e-10 68.9 45 68.9
Sp1g02620 Schrenkiella parvula HOM05D005116 ORTHO05D005937 1.8e-10 68.9 44 70.5
CsaV3_6G012810 Cucumis sativus L. HOM05D005116 ORTHO05D005937 2.4e-10 68.6 45 66.7
Migut.M00082 Erythranthe guttata HOM05D005116 ORTHO05D005937 2.4e-10 68.6 45 66.7
RcHm_v2.0_Chr4g0410421 Rosa chinensis HOM05D005116 ORTHO05D005937 2.4e-10 68.6 43 69.8
TAR629G1139 Trochodendron aralioides HOM05D005116 ORTHO05D005937 2.4e-10 68.6 45 66.7
ATR0763G277 Amborella trichopoda HOM05D005116 ORTHO05D005937 3.1e-10 68.2 45 66.7
CANSAT64G0665 Cannabis sativa HOM05D005116 ORTHO05D005937 3.1e-10 68.2 45 66.7
RcHm_v2.0_Chr7g0225641 Rosa chinensis HOM05D005116 ORTHO05D005937 3.1e-10 68.2 43 69.8
TPR.G29254 Trifolium pratense HOM05D005116 ORTHO05D005937 3.1e-10 68.2 45 66.7
Ca_18939_v3 Cicer arietinum L. HOM05D005116 ORTHO05D005937 4.0e-10 67.8 45 64.4
MELO3C013631.2 Cucumis melo HOM05D005116 ORTHO05D005937 4.0e-10 67.8 45 64.4
Sopen07g027830 Solanum pennellii HOM05D005116 ORTHO05D005937 4.0e-10 67.8 43 69.8
THA.LOC104801168 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 4.0e-10 67.8 43 67.4
TAR627G0112 Trochodendron aralioides HOM05D005116 ORTHO05D005937 4.0e-10 67.8 45 66.7
Prupe.4G278300 Prunus persica HOM05D005116 ORTHO05D005937 5.3e-10 67.4 43 67.4
Solyc07g053860.3 Solanum lycopersicum HOM05D005116 ORTHO05D005937 5.3e-10 67.4 44 68.2
arahy.Tifrunner.gnm1.ann1.3GE2A8 Arachis hypogaea HOM05D005116 ORTHO05D005937 6.9e-10 67.0 45 66.7
Eucgr.A01831 Eucalyptus grandis HOM05D005116 ORTHO05D005937 6.9e-10 67.0 43 67.4
CAN.G209.35 Capsicum annuum HOM05D005116 ORTHO05D005937 9.0e-10 66.6 43 67.4
unitig_748.g8536 Utricularia gibba HOM05D005116 ORTHO05D005937 9.0e-10 66.6 45 64.4
vmacro15911 Vaccinium macrocarpon HOM05D005116 ORTHO05D005937 9.0e-10 66.6 43 67.4
arahy.Tifrunner.gnm1.ann1.KES1NF Arachis hypogaea HOM05D005116 ORTHO05D005937 1.2e-09 66.2 44 68.2
Phvul.011G115315 Phaseolus vulgaris HOM05D005116 ORTHO05D005937 1.2e-09 66.2 43 67.4
Sc09g0004750 Simmondsia chinensis HOM05D005116 ORTHO05D005937 1.2e-09 66.2 45 66.7
Psat7g169080 Pisum sativum HOM05D005116 ORTHO05D005937 1.5e-09 65.9 43 67.4
DCAR_013025 Daucus carota HOM05D005116 ORTHO05D005937 2.0e-09 65.5 45 62.2
Lalb_Chr03g0029531 Lupinus albus HOM05D005116 ORTHO05D005937 2.0e-09 65.5 43 67.4
COL.COLO4_05946 Corchorus olitorius HOM05D005116 ORTHO05D005937 2.6e-09 65.1 43 72.1
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 2.6e-09 65.1 52 61.5
VMungo1127G1891 Vigna mungo HOM05D005116 ORTHO05D005937 3.4e-09 64.7 43 67.4
SEGI_12795 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 4.5e-09 64.3 45 62.2
SEGI_15947 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 4.5e-09 64.3 45 62.2
Glyma.12G116000 Glycine max HOM05D005116 ORTHO05D005937 5.8e-09 63.9 43 67.4
SalBow7G1661 Salvia bowleyana HOM05D002934 ORTHO05D003937 1.7e-08 62.4 45 60.0
GSVIVG01020569001 Vitis vinifera HOM05D005116 ORTHO05D005937 2.9e-08 61.6 55 54.5
Rhsim06G0139500 Rhododendron simsii HOM05D005116 ORTHO05D005937 4.9e-08 60.8 53 58.5
RhsimUnG0145200 Rhododendron simsii HOM05D005116 ORTHO05D005937 4.9e-08 60.8 53 58.5
Aqoxy4G00731 Aquilegia oxysepala HOM05D005116 ORTHO05D005937 6.5e-08 60.5 48 58.3
Gorai.005G200500 Gossypium raimondii HOM05D005116 ORTHO05D005937 8.4e-08 60.1 41 68.3
Gohir.D02G178750 Gossypium hirsutum HOM05D005116 ORTHO05D005937 1.1e-07 59.7 40 70.0
HPP92_007017 Vanilla planifolia HOM05D005116 ORTHO05D005937 1.9e-07 58.9 45 62.2
MBI07_g40350_MAGBIO Magnolia biondii HOM05D005116 ORTHO05D005937 3.2e-07 58.2 71 47.9
Mapoly0076s0049 Marchantia polymorpha HOM05D005116 ORTHO05D005937 3.2e-07 58.2 44 61.4
AagrBONN_evm.TU.Sc2ySwM_344.4439 Anthoceros agrestis HOM05D005116 ORTHO05D005937 1.2e-06 56.2 43 55.8
AagrBONN_evm.TU.Sc2ySwM_368.1082 Anthoceros agrestis HOM05D005116 ORTHO05D005937 1.2e-06 56.2 43 55.8
Os01g0928300 Oryza sativa ssp. japonica HOM05D005116 ORTHO05D005937 2.1e-06 55.5 41 58.5


User provided reference genes

Program Settings