Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 9.1e-74 280.4 170 100.0
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 1.5e-63 246.5 170 88.8
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 1.5e-63 246.5 170 88.8
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 9.5e-39 164.1 169 61.5
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.9e-34 149.8 168 64.3
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 2.1e-33 146.4 174 59.2
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 3.0e-32 142.5 168 67.9
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 3.9e-32 142.1 175 52.6
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.5e-31 139.4 168 50.6
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 2.5e-31 139.4 180 65.0
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 2.1e-30 136.3 172 64.0
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 1.1e-29 134.0 172 61.0
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 1.4e-29 133.7 174 58.6
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.4e-29 133.7 168 54.8
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 6.8e-29 131.3 170 63.5
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 6.8e-29 131.3 172 61.6
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.5e-28 130.2 173 58.4
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 2.0e-28 129.8 161 64.0
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 2.6e-28 129.4 175 57.1
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 2.6e-28 129.4 179 60.3
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 2.6e-28 129.4 173 55.5
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 7.6e-28 127.9 175 56.0
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 9.9e-28 127.5 174 55.7
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 9.9e-28 127.5 178 59.0
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 9.9e-28 127.5 175 63.4
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 1.3e-27 127.1 174 58.6
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 2.2e-27 126.3 174 60.3
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 4.9e-27 125.2 179 59.8
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 8.4e-27 124.4 171 57.9
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 1.1e-26 124.0 171 62.0
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 2.4e-26 122.9 173 58.4
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 2.4e-26 122.9 177 57.6
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 7.1e-26 121.3 169 62.1
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 9.2e-26 120.9 172 47.7
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 6.0e-25 118.2 141 51.1
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 6.0e-25 118.2 180 57.2
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 6.0e-25 118.2 176 57.4
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.0e-24 117.5 171 57.3
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 1.3e-24 117.1 177 53.7
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.3e-24 116.3 130 53.8
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 2.3e-24 116.3 180 56.7
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 3.0e-24 115.9 119 58.8
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 3.0e-24 115.9 132 62.1
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 3.9e-24 115.5 174 56.3
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 8.6e-24 114.4 184 49.5
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 8.6e-24 114.4 178 61.2
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 8.6e-24 114.4 127 66.9
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 7.3e-23 111.3 175 58.3
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 9.6e-23 110.9 175 58.9
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.2e-22 110.5 151 43.7
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 4.7e-22 108.6 151 43.0
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-21 107.5 171 54.4
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.1e-21 107.5 171 54.4
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 1.8e-21 106.7 178 55.1
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.8e-21 106.7 171 55.0
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.8e-21 106.7 172 51.7
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.4e-21 106.3 173 45.1
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.1e-21 105.9 159 54.1
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.1e-21 105.9 173 45.1
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 4.0e-21 105.5 176 47.2
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.2e-21 105.1 171 54.4
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 6.9e-21 104.8 166 58.4
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 8.9e-21 104.4 119 56.3
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 8.9e-21 104.4 174 42.0
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 8.9e-21 104.4 174 42.0
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.5e-20 103.6 174 42.0
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.5e-20 103.6 143 60.8
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 2.6e-20 102.8 175 56.6
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 3.4e-20 102.4 174 42.0
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 3.4e-20 102.4 181 55.2
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 4.4e-20 102.1 176 58.0
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 7.6e-20 101.3 169 47.3
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 9.9e-20 100.9 169 40.2
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 9.9e-20 100.9 168 41.7
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 9.9e-20 100.9 168 41.7
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 1.3e-19 100.5 173 54.3
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.3e-19 100.5 173 42.8
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 1.3e-19 100.5 170 50.0
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 1.3e-19 100.5 135 58.5
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.7e-19 100.1 175 52.0
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 2.2e-19 99.8 124 49.2
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.9e-19 99.4 185 54.6
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.9e-19 99.4 176 56.2
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 2.9e-19 99.4 177 52.5
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 8.4e-19 97.8 174 44.3
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 1.1e-18 97.4 169 40.2
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-18 97.4 171 46.8
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.4e-18 97.1 173 39.9
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 1.4e-18 97.1 173 56.6
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 1.4e-18 97.1 169 51.5
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 1.9e-18 96.7 168 41.1
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 1.9e-18 96.7 168 41.1
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 1.9e-18 96.7 168 41.1
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 1.9e-18 96.7 181 47.5
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.9e-18 96.7 124 46.8
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 2.4e-18 96.3 168 42.3
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 2.4e-18 96.3 171 55.6
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 5.4e-18 95.1 170 56.5
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 7.1e-18 94.7 176 39.2
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 7.1e-18 94.7 165 52.1
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 9.3e-18 94.4 135 57.0
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 1.2e-17 94.0 87 55.2
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 1.2e-17 94.0 169 54.4
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 1.6e-17 93.6 181 51.4
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 4.6e-17 92.0 171 56.7
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 4.6e-17 92.0 176 55.1
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 6.0e-17 91.7 171 56.7
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 1.7e-16 90.1 131 43.5
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 3.0e-16 89.4 126 62.7
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 3.0e-16 89.4 168 54.8
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 3.9e-16 89.0 169 52.1
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 1.5e-15 87.0 165 55.2
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.9e-15 86.7 161 39.1
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 2.5e-15 86.3 143 45.5
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 2.5e-15 86.3 169 52.7
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 4.3e-15 85.5 127 42.5
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 7.3e-15 84.7 174 51.1
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 7.3e-15 84.7 171 52.0
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 7.3e-15 84.7 166 51.2
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 7.3e-15 84.7 165 53.9
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 9.6e-15 84.3 168 50.6
ECA246G0037 Erigeron canadensis HOM05D005335 ORTHO05D006472 6.2e-14 81.6 172 50.0
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 6.2e-14 81.6 169 52.1
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 6.2e-14 81.6 171 36.8
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 8.1e-14 81.3 126 41.3
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 1.1e-13 80.9 89 75.3
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.4e-13 80.5 124 42.7
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.4e-13 80.5 127 40.9
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 6.9e-13 78.2 189 46.0
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 9.0e-13 77.8 126 44.4
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 9.9e-12 74.3 170 50.0
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 1.1e-10 70.9 174 48.3
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 2.4e-10 69.7 115 47.0
unitig_8.g4035 Utricularia gibba HOM05D005335 ORTHO05D006472 5.4e-10 68.6 140 52.9
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 7.1e-10 68.2 172 47.1
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 7.9e-09 64.7 88 68.2
Nitab4.5_0002870g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 3.3e-07 59.3 167 42.5
CAN.G637.28 Capsicum annuum HOM05D000179 ORTHO05D000107 7.4e-07 58.2 166 43.4
Nitab4.5_0004454g0060 Nicotiana tabacum HOM05D000179 ORTHO05D000107 9.6e-07 57.8 167 41.3
Peaxi162Scf00171g00727 Petunia axillaris HOM05D000179 ORTHO05D000107 9.6e-07 57.8 166 39.2
CDE11G1049 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 1.3e-06 57.4 166 42.8
CDE05G0391 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 1.6e-06 57.0 166 42.2
Gorai.006G190500 Gossypium raimondii HOM05D000179 ORTHO05D000107 1.6e-06 57.0 161 36.6
Oeu007933.1 Olea europaea HOM05D000179 ORTHO05D000107 1.6e-06 57.0 146 31.5
PGSC0003DMG400031049 Solanum tuberosum HOM05D000179 ORTHO05D000107 2.1e-06 56.6 161 42.9
Solyc03g098070.3 Solanum lycopersicum HOM05D000179 ORTHO05D000107 2.8e-06 56.2 161 42.9
Sopen03g028770 Solanum pennellii HOM05D000179 ORTHO05D000107 2.8e-06 56.2 161 43.5
CiPaw.05G159500 Carya illinoinensis HOM05D000179 ORTHO05D000107 3.7e-06 55.8 84 54.8
CiPaw.15G149400 Carya illinoinensis HOM05D000179 ORTHO05D000107 3.7e-06 55.8 166 42.2
Ciclev10020125m.g Citrus clementina HOM05D000179 ORTHO05D000107 4.8e-06 55.5 167 42.5
Gohir.A11G002000 Gossypium hirsutum HOM05D000179 ORTHO05D000107 4.8e-06 55.5 166 42.2


User provided reference genes

Program Settings