Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023439.1 Olea europaea HOM05D003072 ORTHO05D008464 4.6e-61 237.7 116 100.0
Oeu024702.3 Olea europaea HOM05D003072 ORTHO05D008464 5.3e-33 144.4 76 93.4
Actinidia19109 Actinidia chinensis HOM05D003072 ORTHO05D008464 7.7e-32 140.6 79 86.1
CSS0018322 Camellia sinensis var. sinensis HOM05D003072 ORTHO05D008464 2.2e-31 139.0 79 84.8
CSS0033777 Camellia sinensis var. sinensis HOM05D003072 ORTHO05D008464 2.2e-31 139.0 79 84.8
Rhsim12G0166200 Rhododendron simsii HOM05D003072 ORTHO05D008464 8.5e-31 137.1 79 82.3
SalBow5G5496 Salvia bowleyana HOM05D003072 ORTHO05D008464 1.5e-30 136.3 78 84.6
SGA_v2.0_scaffold25G10826 Striga asiatica HOM05D003072 ORTHO05D008464 2.5e-30 135.6 79 77.2
Migut.O00122 Erythranthe guttata HOM05D003072 ORTHO05D008464 3.2e-30 135.2 76 85.5
COL.COLO4_30098 Corchorus olitorius HOM05D003072 ORTHO05D008464 4.2e-30 134.8 76 85.5
Thecc.03G018600 Theobroma cacao HOM05D003072 ORTHO05D008464 4.2e-30 134.8 76 85.5
SGA_v2.0_scaffold25G10821 Striga asiatica HOM05D003072 ORTHO05D008464 5.5e-30 134.4 103 64.1
Cc04_g12330 Coffea canephora HOM05D003072 ORTHO05D008464 9.4e-30 133.7 79 81.0
Potri.012G088700 Populus trichocarpa HOM05D003072 ORTHO05D008464 9.4e-30 133.7 78 84.6
TAR371G0662 Trochodendron aralioides HOM05D003072 ORTHO05D008464 9.4e-30 133.7 78 82.1
vmacro16626 Vaccinium macrocarpon HOM05D003072 ORTHO05D008464 9.4e-30 133.7 79 81.0
Duzib068G0599 Durio zibethinus HOM05D003072 ORTHO05D008464 2.1e-29 132.5 78 83.3
Dinv38563 Davidia involucrata HOM05D003072 ORTHO05D008464 2.7e-29 132.1 74 87.8
Gohir.A09G172700 Gossypium hirsutum HOM05D003072 ORTHO05D008464 3.6e-29 131.7 78 83.3
CANSAT80G0622 Cannabis sativa HOM05D003072 ORTHO05D008464 4.7e-29 131.3 78 83.3
Ca_16157_v3 Cicer arietinum L. HOM05D003072 ORTHO05D008464 6.1e-29 131.0 78 83.3
Hund09452 Selenicereus undatus HOM05D003072 ORTHO05D008464 6.1e-29 131.0 109 60.6
GSVIVG01007705001 Vitis vinifera HOM05D003072 ORTHO05D008464 6.1e-29 131.0 76 81.6
Cfa019166 Carpinus fangiana HOM05D003072 ORTHO05D008464 8.0e-29 130.6 78 83.3
Ciclev10020708m.g Citrus clementina HOM05D003072 ORTHO05D008464 8.0e-29 130.6 78 83.3
ECA247G2325 Erigeron canadensis HOM05D003072 ORTHO05D008464 8.0e-29 130.6 76 81.6
Nitab4.5_0000025g0470 Nicotiana tabacum HOM05D003072 ORTHO05D008464 8.0e-29 130.6 76 84.2
Nitab4.5_0014195g0010 Nicotiana tabacum HOM05D003072 ORTHO05D008464 8.0e-29 130.6 76 84.2
Nn4g22691 Nelumbo nucifera HOM05D003072 ORTHO05D008464 1.0e-28 130.2 77 83.1
Sabra12G0063900 Salix brachista HOM05D003072 ORTHO05D008464 1.0e-28 130.2 78 83.3
Sc10g0010140 Simmondsia chinensis HOM05D003072 ORTHO05D008464 1.0e-28 130.2 73 80.8
Gohir.D09G168400 Gossypium hirsutum HOM05D003072 ORTHO05D008464 1.4e-28 129.8 78 82.1
Gorai.006G190000 Gossypium raimondii HOM05D003072 ORTHO05D008464 1.4e-28 129.8 78 82.1
MD06G1171000 Malus domestica HOM05D003072 ORTHO05D008464 1.4e-28 129.8 76 82.9
CAN.G22.19 Capsicum annuum HOM05D003072 ORTHO05D008464 1.8e-28 129.4 78 79.5
Lsat_1_v5_gn_1_28241 Lactuca sativa HOM05D003072 ORTHO05D008464 2.3e-28 129.0 76 81.6
RcHm_v2.0_Chr7g0193191 Rosa chinensis HOM05D003072 ORTHO05D008464 2.3e-28 129.0 78 80.8
PGSC0003DMG400005293 Solanum tuberosum HOM05D003072 ORTHO05D008464 2.3e-28 129.0 76 81.6
arahy.Tifrunner.gnm1.ann1.I5Y7BI Arachis hypogaea HOM05D003072 ORTHO05D008464 3.9e-28 128.3 78 80.8
arahy.Tifrunner.gnm1.ann1.UB4QBN Arachis hypogaea HOM05D003072 ORTHO05D008464 3.9e-28 128.3 78 80.8
arahy.Tifrunner.gnm1.ann1.X1G4VU Arachis hypogaea HOM05D003072 ORTHO05D008464 3.9e-28 128.3 78 80.8
FAN13G2858 Fragaria x ananassa HOM05D005107 ORTHO05D008464 3.9e-28 128.3 78 79.5
Glyma.04G185500 Glycine max HOM05D003072 ORTHO05D008464 3.9e-28 128.3 78 80.8
Glyma.06G180600 Glycine max HOM05D003072 ORTHO05D008464 3.9e-28 128.3 78 80.8
HanXRQChr02g0035971 Helianthus annuus HOM05D003072 ORTHO05D008464 5.2e-28 127.9 76 81.6
Prupe.5G170600 Prunus persica HOM05D003072 ORTHO05D008464 5.2e-28 127.9 78 80.8
TPR.G14918 Trifolium pratense HOM05D003072 ORTHO05D008464 5.2e-28 127.9 78 79.5
Haze_07541 Corylus avellana HOM05D003072 ORTHO05D008464 6.7e-28 127.5 78 82.1
Migut.D01960 Erythranthe guttata HOM05D003072 ORTHO05D008464 6.7e-28 127.5 78 80.8
FAN04G2540 Fragaria x ananassa HOM05D003072 ORTHO05D008464 6.7e-28 127.5 78 79.5
Medtr3g077500 Medicago truncatula HOM05D003072 ORTHO05D008464 6.7e-28 127.5 78 80.8
FvH4_5g05620 Fragaria vesca HOM05D003072 ORTHO05D008464 8.8e-28 127.1 78 79.5
FAN18G1595 Fragaria x ananassa HOM05D005107 ORTHO05D008464 8.8e-28 127.1 78 79.5
FAN18G3341 Fragaria x ananassa HOM05D003072 ORTHO05D008464 8.8e-28 127.1 78 79.5
QL10p010881 Quercus lobata HOM05D003072 ORTHO05D008464 8.8e-28 127.1 78 82.1
TAR629G1829 Trochodendron aralioides HOM05D003072 ORTHO05D008464 8.8e-28 127.1 74 83.8
MD14G1176700 Malus domestica HOM05D003072 ORTHO05D008464 1.1e-27 126.7 74 83.8
Psat5g115560 Pisum sativum HOM05D003072 ORTHO05D008464 1.1e-27 126.7 78 79.5
TWI23G0250 Tripterygium wilfordii HOM05D003072 ORTHO05D008464 1.1e-27 126.7 78 80.8
Lj1g0004806 Lotus japonicus HOM05D003072 ORTHO05D008464 1.5e-27 126.3 78 80.8
Atru.chr9.2517 Acer truncatum HOM05D003072 ORTHO05D008464 2.0e-27 125.9 78 82.1
Lalb_Chr11g0070411 Lupinus albus HOM05D003072 ORTHO05D008464 2.0e-27 125.9 78 78.2
Manes.06G107000 Manihot esculenta HOM05D003072 ORTHO05D008464 2.0e-27 125.9 74 83.8
ATR1152G060 Amborella trichopoda HOM05D003072 ORTHO05D008464 3.3e-27 125.2 79 74.7
AUR62008185 Chenopodium quinoa HOM05D003072 ORTHO05D008464 3.3e-27 125.2 78 75.6
Lalb_Chr23g0273311 Lupinus albus HOM05D003072 ORTHO05D008464 3.3e-27 125.2 78 79.5
arahy.Tifrunner.gnm1.ann1.9W8DT5 Arachis hypogaea HOM05D003072 ORTHO05D008464 4.4e-27 124.8 78 79.5
FAN08G3219 Fragaria x ananassa HOM05D003072 ORTHO05D008464 5.7e-27 124.4 78 78.2
THA.LOC104821479 Tarenaya hassleriana HOM05D003072 ORTHO05D008464 5.7e-27 124.4 74 85.1
Aqoxy3G02847 Aquilegia oxysepala HOM05D003072 ORTHO05D008464 7.4e-27 124.0 74 78.4
Cpa.g.sc153.4 Carica papaya HOM05D003072 ORTHO05D008464 7.4e-27 124.0 78 80.8
Eucgr.K02823 Eucalyptus grandis HOM05D003072 ORTHO05D008464 7.4e-27 124.0 78 78.2
CARHR276840 Cardamine hirsuta HOM05D003072 ORTHO05D008464 1.3e-26 123.2 74 85.1
ClCG06G017110 Citrullus lanatus HOM05D003072 ORTHO05D008464 1.3e-26 123.2 78 78.2
PSO063G3972 Papaver somniferum HOM05D003072 ORTHO05D008464 1.7e-26 122.9 77 76.6
PSO832G3209 Papaver somniferum HOM05D003072 ORTHO05D008464 1.7e-26 122.9 77 76.6
Phvul.009G176300 Phaseolus vulgaris HOM05D003072 ORTHO05D008464 2.8e-26 122.1 76 80.3
Sed0027860 Sechium edule HOM05D003072 ORTHO05D008464 4.8e-26 121.3 78 76.9
CiPaw.12G028300 Carya illinoinensis HOM05D003072 ORTHO05D008464 1.1e-25 120.2 75 81.3
MELO3C026285.2 Cucumis melo HOM05D003072 ORTHO05D008464 1.1e-25 120.2 78 76.9
Aa31LG11G630 Aethionema arabicum HOM05D003072 ORTHO05D008464 1.4e-25 119.8 74 82.4
BcaC04g23369 Brassica carinata HOM05D003072 ORTHO05D008464 1.4e-25 119.8 74 83.8
A09p08000 Brassica napus HOM05D005107 ORTHO05D006200 1.4e-25 119.8 74 83.8
C09p09050 Brassica napus HOM05D005107 ORTHO05D006200 1.4e-25 119.8 74 83.8
BolC9t53817H Brassica oleracea HOM05D003072 ORTHO05D008464 1.4e-25 119.8 74 83.8
BraA09t36450Z Brassica rapa HOM05D003072 ORTHO05D008464 1.4e-25 119.8 74 83.8
CsaV3_1G001390 Cucumis sativus L. HOM05D003072 ORTHO05D008464 1.8e-25 119.4 78 76.9
MBI10_g36534_MAGBIO Magnolia biondii HOM05D003072 ORTHO05D008464 5.3e-25 117.9 74 78.4
Zm00001eb155560 Zea mays HOM05D003072 ORTHO05D008464 7.0e-25 117.5 66 84.8
MSTRG.4363 Avicennia marina HOM05D003072 ORTHO05D008464 1.6e-24 116.3 66 86.4
CDE06G1157 Ceratophyllum demersum HOM05D003072 ORTHO05D008464 2.0e-24 115.9 73 76.7
PGR044G0204 Punica granatum HOM05D003072 ORTHO05D008464 7.7e-24 114.0 73 79.5
CsaV3_1G029060 Cucumis sativus L. HOM05D003072 ORTHO05D008464 1.1e-22 110.2 78 73.1
DCAR_016474 Daucus carota HOM05D003072 ORTHO05D008464 1.1e-22 110.2 65 80.0
unitig_21.g20445 Utricularia gibba HOM05D003072 ORTHO05D008464 1.1e-22 110.2 71 73.2
TWI14G0324 Tripterygium wilfordii HOM05D003072 ORTHO05D008464 1.5e-22 109.8 65 83.1
Ah.11g051460 Amaranthus hybridus HOM05D004430 ORTHO05D005088 1.9e-22 109.4 60 86.7
Os01g0704200 Oryza sativa ssp. japonica HOM05D003072 ORTHO05D008464 1.9e-22 109.4 62 83.9
Thhalv10004444m.g Eutrema salsugineum HOM05D003072 ORTHO05D008464 3.2e-22 108.6 61 88.5
EL10Ac5g10715 Beta vulgaris HOM05D003072 ORTHO05D008464 4.2e-22 108.2 63 81.0
BcaB04g19952 Brassica carinata HOM05D003072 ORTHO05D008464 7.2e-22 107.5 60 88.3
AT5G63040 Arabidopsis thaliana HOM05D003072 ORTHO05D008464 9.4e-22 107.1 60 88.3
Carub.0008s2375 Capsella rubella HOM05D003072 ORTHO05D008464 9.4e-22 107.1 60 88.3
Sp2g26170 Schrenkiella parvula HOM05D003072 ORTHO05D008464 9.4e-22 107.1 61 86.9
AUR62028765 Chenopodium quinoa HOM05D003072 ORTHO05D008464 2.7e-21 105.5 63 79.4
Lj5A126T85 Lonicera japonica HOM05D003072 ORTHO05D008464 3.6e-21 105.1 64 79.7
AL3G51110 Arabidopsis lyrata HOM05D003072 ORTHO05D008464 4.7e-21 104.8 56 91.1
BcaB04g19949 Brassica carinata HOM05D005107 ORTHO05D006200 4.7e-21 104.8 56 91.1
SEGI_20742 Sequoiadendron giganteum HOM05D003072 ORTHO05D008464 3.0e-20 102.1 80 60.0
SHI17121 Sapria himalayana HOM05D003072 ORTHO05D008464 2.8e-18 95.5 74 66.2
Glyma.05G039200 Glycine max HOM05D003072 ORTHO05D008464 3.5e-16 88.6 80 51.2
AagrBONN_evm.TU.Sc2ySwM_344.2078 Anthoceros agrestis HOM05D003072 ORTHO05D008464 5.0e-15 84.7 74 51.4
arahy.Tifrunner.gnm1.ann1.2PZF9J Arachis hypogaea HOM05D003072 ORTHO05D008464 6.5e-15 84.3 49 79.6
Glyma.05G039300 Glycine max HOM05D003072 ORTHO05D008464 1.9e-14 82.8 72 54.2
Pp3c21_4590 Physcomitrium patens HOM05D003072 ORTHO05D008464 3.2e-14 82.0 77 45.5
Mapoly0071s0121 Marchantia polymorpha HOM05D003072 ORTHO05D008464 5.5e-14 81.3 74 51.4
Mapoly0229s0007 Marchantia polymorpha HOM05D003072 ORTHO05D008464 5.5e-14 81.3 74 51.4
SEGI_11013 Sequoiadendron giganteum HOM05D003072 ORTHO05D008464 7.2e-14 80.9 72 54.2
VMungo1215G1540 Vigna mungo HOM05D003072 ORTHO05D008464 2.0e-11 72.8 68 51.5
TPR.G12340 Trifolium pratense HOM05D003072 ORTHO05D009443 7.7e-08 60.8 73 41.1
Lalb_Chr23g0266741 Lupinus albus HOM05D003072 ORTHO05D009443 5.0e-07 58.2 92 37.0
Psat5g144160 Pisum sativum HOM05D003072 ORTHO05D009443 5.0e-07 58.2 73 38.4
Psat0s2724g0120 Pisum sativum HOM05D003072 ORTHO05D009443 8.6e-07 57.4 73 38.4
Ca_15532_v3 Cicer arietinum L. HOM05D003072 ORTHO05D009443 1.5e-06 56.6 73 39.7
arahy.Tifrunner.gnm1.ann1.GU9I85 Arachis hypogaea HOM05D003072 ORTHO05D009443 2.5e-06 55.8 70 37.1
PSO675G7593 Papaver somniferum HOM05D003072 ORTHO05D009443 5.5e-06 54.7 73 37.0
Aqoxy6G00956 Aquilegia oxysepala HOM05D003072 ORTHO05D009443 9.5e-06 53.9 73 35.6
PSO541G1128 Papaver somniferum HOM05D003072 ORTHO05D009443 9.5e-06 53.9 73 37.0
SGA_v2.0_scaffold48G18036 Striga asiatica HOM05D003072 ORTHO05D009443 9.5e-06 53.9 70 34.3


User provided reference genes

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