Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023395.1 Olea europaea HOM05D006086 ORTHO05D007396 1.3e-30 135.6 63 100.0
Oeu031234.1 Olea europaea HOM05D006086 ORTHO05D007396 6.2e-28 126.7 63 92.1
Cc03_g03710 Coffea canephora HOM05D006086 ORTHO05D007396 1.8e-27 125.2 62 91.9
Oeu011629.1 Olea europaea HOM05D006086 ORTHO05D007396 5.3e-27 123.6 63 93.7
Nitab4.5_0000043g0210 Nicotiana tabacum HOM05D006086 ORTHO05D007396 3.4e-26 120.9 63 88.9
Nitab4.5_0012971g0020 Nicotiana tabacum HOM05D006086 ORTHO05D007396 3.4e-26 120.9 63 88.9
HanXRQChr15g0492031 Helianthus annuus HOM05D006086 ORTHO05D007396 1.7e-25 118.6 65 86.2
DCAR_030633 Daucus carota HOM05D006086 ORTHO05D007396 3.8e-25 117.5 63 87.3
Migut.G00335 Erythranthe guttata HOM05D006086 ORTHO05D007396 3.8e-25 117.5 64 87.5
GSVIVG01017965001 Vitis vinifera HOM05D006086 ORTHO05D007396 8.4e-25 116.3 62 88.7
Solyc09g075980.3 Solanum lycopersicum HOM05D006086 ORTHO05D007396 1.1e-24 115.9 63 87.3
PGSC0003DMG400030088 Solanum tuberosum HOM05D006086 ORTHO05D007396 1.1e-24 115.9 63 87.3
CAN.G907.3 Capsicum annuum HOM05D006086 ORTHO05D007396 1.9e-24 115.2 63 87.3
CSS0045022 Camellia sinensis var. sinensis HOM05D006086 ORTHO05D007396 3.2e-24 114.4 63 85.7
SalBow2G3603 Salvia bowleyana HOM05D006086 ORTHO05D007396 3.2e-24 114.4 65 84.6
Lsat_1_v5_gn_7_65621 Lactuca sativa HOM05D006086 ORTHO05D007396 4.2e-24 114.0 65 83.1
FvH4_4g15440 Fragaria vesca HOM05D006086 ORTHO05D007396 5.5e-24 113.6 64 85.9
FAN12G3621 Fragaria x ananassa HOM05D006086 ORTHO05D007396 5.5e-24 113.6 64 85.9
FAN17G2927 Fragaria x ananassa HOM05D006086 ORTHO05D007396 5.5e-24 113.6 64 85.9
FAN22G1306 Fragaria x ananassa HOM05D006086 ORTHO05D007396 5.5e-24 113.6 64 85.9
Lj5g0007110 Lotus japonicus HOM05D006086 ORTHO05D007396 7.1e-24 113.2 59 86.4
RcHm_v2.0_Chr4g0416351 Rosa chinensis HOM05D006086 ORTHO05D007396 7.1e-24 113.2 58 89.7
Thecc.04G230800 Theobroma cacao HOM05D006086 ORTHO05D007396 9.3e-24 112.8 63 84.1
Atru.ctg752_3.89 Acer truncatum HOM05D006086 ORTHO05D007396 1.6e-23 112.1 55 90.9
Lalb_Chr05g0210971 Lupinus albus HOM05D006086 ORTHO05D007396 1.6e-23 112.1 63 82.5
Medtr1g104520 Medicago truncatula HOM05D006086 ORTHO05D007396 1.6e-23 112.1 63 81.0
ECA240G3083 Erigeron canadensis HOM05D006086 ORTHO05D007396 2.1e-23 111.7 68 80.9
Glyma.20G145600 Glycine max HOM05D006086 ORTHO05D007396 2.1e-23 111.7 63 82.5
A05p26350 Brassica napus HOM05D006086 ORTHO05D007396 2.7e-23 111.3 63 81.0
BraA05t21510Z Brassica rapa HOM05D006086 ORTHO05D007396 2.7e-23 111.3 63 81.0
Glyma.10G248500 Glycine max HOM05D006086 ORTHO05D007396 2.7e-23 111.3 63 82.5
HPP92_015928 Vanilla planifolia HOM05D006086 ORTHO05D007396 2.7e-23 111.3 57 87.7
BraA01t03396Z Brassica rapa HOM05D006086 ORTHO05D007396 4.6e-23 110.5 62 80.6
Glyma.01G238500 Glycine max HOM05D006086 ORTHO05D007396 4.6e-23 110.5 63 81.0
DCAR_027212 Daucus carota HOM05D006086 ORTHO05D007396 6.0e-23 110.2 60 85.0
Phvul.002G045900 Phaseolus vulgaris HOM05D006086 ORTHO05D007396 6.0e-23 110.2 54 90.7
Sed0006679 Sechium edule HOM05D006086 ORTHO05D007396 6.0e-23 110.2 63 84.1
CsaV3_3G013360 Cucumis sativus L. HOM05D006086 ORTHO05D007396 1.0e-22 109.4 63 84.1
TAR636G0808 Trochodendron aralioides HOM05D006086 ORTHO05D007396 1.3e-22 109.0 59 83.1
A01p32670 Brassica napus HOM05D006086 ORTHO05D007396 1.8e-22 108.6 62 79.0
BolC3t17520H Brassica oleracea HOM05D006086 ORTHO05D007396 1.8e-22 108.6 63 79.4
Hma1.2p1_3079F.1_g332420 Hydrangea macrophylla HOM05D006086 ORTHO05D007396 1.8e-22 108.6 59 81.4
Phvul.007G056800 Phaseolus vulgaris HOM05D006086 ORTHO05D007396 1.8e-22 108.6 62 79.0
Carub.0003s2258 Capsella rubella HOM05D006086 ORTHO05D007396 2.3e-22 108.2 58 84.5
MD13G1192200 Malus domestica HOM05D006086 ORTHO05D007396 2.3e-22 108.2 65 78.5
Nn4g26304 Nelumbo nucifera HOM05D006086 ORTHO05D007396 2.3e-22 108.2 59 84.7
Prupe.1G012900 Prunus persica HOM05D006086 ORTHO05D007396 2.3e-22 108.2 60 85.0
CiPaw.01G165300 Carya illinoinensis HOM05D006086 ORTHO05D007396 3.0e-22 107.8 59 83.1
Manes.15G028500 Manihot esculenta HOM05D006086 ORTHO05D007396 3.0e-22 107.8 59 83.1
Medtr5g006200 Medicago truncatula HOM05D006086 ORTHO05D007396 3.0e-22 107.8 59 83.1
Gohir.A09G215300 Gossypium hirsutum HOM05D006086 ORTHO05D007396 3.9e-22 107.5 54 90.7
Gohir.D09G217800 Gossypium hirsutum HOM05D006086 ORTHO05D007396 3.9e-22 107.5 54 90.7
arahy.Tifrunner.gnm1.ann1.GC569L Arachis hypogaea HOM05D006086 ORTHO05D007396 6.7e-22 106.7 63 81.0
arahy.Tifrunner.gnm1.ann1.I5363L Arachis hypogaea HOM05D006086 ORTHO05D007396 6.7e-22 106.7 63 81.0
arahy.Tifrunner.gnm1.ann1.NA8V5S Arachis hypogaea HOM05D006086 ORTHO05D007396 6.7e-22 106.7 64 79.7
arahy.Tifrunner.gnm1.ann1.K13GF2 Arachis hypogaea HOM05D006086 ORTHO05D007396 8.7e-22 106.3 64 79.7
CARHR098310 Cardamine hirsuta HOM05D006086 ORTHO05D007396 8.7e-22 106.3 60 83.3
Glyma.11G005000 Glycine max HOM05D006086 ORTHO05D007396 8.7e-22 106.3 54 85.2
Thecc.05G288200 Theobroma cacao HOM05D006086 ORTHO05D007396 8.7e-22 106.3 55 87.3
C01p41850 Brassica napus HOM05D006086 ORTHO05D007396 1.1e-21 105.9 55 85.5
BolC1t04139H Brassica oleracea HOM05D006086 ORTHO05D007396 1.1e-21 105.9 55 85.5
EL10Ac3g06420 Beta vulgaris HOM05D006086 ORTHO05D007396 1.5e-21 105.5 62 82.3
Dinv44531 Davidia involucrata HOM05D006086 ORTHO05D007396 1.5e-21 105.5 59 81.4
AL3G36690 Arabidopsis lyrata HOM05D006086 ORTHO05D007396 1.9e-21 105.1 58 82.8
Potri.008G152200 Populus trichocarpa HOM05D006086 ORTHO05D007396 1.9e-21 105.1 59 83.1
CSS0028415 Camellia sinensis var. sinensis HOM05D006086 ORTHO05D007396 2.5e-21 104.8 63 77.8
Sed0021654 Sechium edule HOM05D006086 ORTHO05D007396 3.3e-21 104.4 62 83.9
GSVIVG01021842001 Vitis vinifera HOM05D006086 ORTHO05D007396 4.3e-21 104.0 59 81.4
MD16G1192800 Malus domestica HOM05D006086 ORTHO05D007396 5.7e-21 103.6 68 72.1
Potri.010G088200 Populus trichocarpa HOM05D006086 ORTHO05D007396 5.7e-21 103.6 59 81.4
Nn1g02292 Nelumbo nucifera HOM05D006086 ORTHO05D007396 7.4e-21 103.2 61 80.3
TAR633G0013 Trochodendron aralioides HOM05D006086 ORTHO05D007396 9.6e-21 102.8 59 78.0
Lalb_Chr23g0273411 Lupinus albus HOM05D006086 ORTHO05D007396 1.3e-20 102.4 59 79.7
Gorai.006G238700 Gossypium raimondii HOM05D006086 ORTHO05D007396 1.6e-20 102.1 54 88.9
Prupe.7G268200 Prunus persica HOM05D006086 ORTHO05D007396 1.6e-20 102.1 61 78.7
Os07g0572400 Oryza sativa ssp. japonica HOM05D006086 ORTHO05D007396 3.7e-20 100.9 53 84.9
Phvul.001G152800 Phaseolus vulgaris HOM05D006086 ORTHO05D007396 4.8e-20 100.5 61 80.3
Potri.005G211000 Populus trichocarpa HOM05D006086 ORTHO05D007396 6.3e-20 100.1 57 78.9
Gohir.A11G255000 Gossypium hirsutum HOM05D006086 ORTHO05D007396 1.1e-19 99.4 63 74.6
Gohir.D11G264700 Gossypium hirsutum HOM05D006086 ORTHO05D007396 1.1e-19 99.4 63 74.6
Gorai.007G284800 Gossypium raimondii HOM05D006086 ORTHO05D007396 1.1e-19 99.4 63 74.6
Glyma.03G155400 Glycine max HOM05D006086 ORTHO05D007396 1.4e-19 99.0 61 78.7
Os01g0778500 Oryza sativa ssp. japonica HOM05D006086 ORTHO05D007396 1.8e-19 98.6 61 72.1
Thecc.01G143500 Theobroma cacao HOM05D006086 ORTHO05D007396 1.8e-19 98.6 59 74.6
Glyma.19G157600 Glycine max HOM05D006086 ORTHO05D007396 4.1e-19 97.4 61 77.0
BolC5t32839H Brassica oleracea HOM05D006086 ORTHO05D007396 5.3e-19 97.1 58 77.6
Psat3g063680 Pisum sativum HOM05D006086 ORTHO05D007396 5.3e-19 97.1 53 81.1
Gohir.A02G031700 Gossypium hirsutum HOM05D006086 ORTHO05D007396 9.0e-19 96.3 59 76.3
Gohir.D02G038400 Gossypium hirsutum HOM05D006086 ORTHO05D007396 9.0e-19 96.3 59 76.3
Gorai.005G042300 Gossypium raimondii HOM05D006086 ORTHO05D007396 9.0e-19 96.3 59 76.3
Lj1g0005264 Lotus japonicus HOM05D006086 ORTHO05D007396 9.0e-19 96.3 61 75.4
MD02G1003000 Malus domestica HOM05D006086 ORTHO05D007396 9.0e-19 96.3 60 71.7
Zm00001eb151540 Zea mays HOM05D006086 ORTHO05D007396 9.0e-19 96.3 61 68.9
Manes.03G179500 Manihot esculenta HOM05D006086 ORTHO05D007396 1.5e-18 95.5 53 84.9
Psat4g210480 Pisum sativum HOM05D006086 ORTHO05D007396 1.5e-18 95.5 63 69.8
Medtr7g095120 Medicago truncatula HOM05D006086 ORTHO05D007396 2.0e-18 95.1 62 69.4
CiPaw.07G090400 Carya illinoinensis HOM05D006086 ORTHO05D007396 4.5e-18 94.0 60 73.3
Zm00001eb107360 Zea mays HOM05D006086 ORTHO05D007396 4.5e-18 94.0 59 74.6
Os03g0806800 Oryza sativa ssp. japonica HOM05D006086 ORTHO05D007396 5.9e-18 93.6 54 74.1
Gohir.D11G232700 Gossypium hirsutum HOM05D006086 ORTHO05D007396 1.0e-17 92.8 59 71.2
Gorai.003G066200 Gossypium raimondii HOM05D006086 ORTHO05D007396 1.3e-17 92.4 59 71.2
Manes.05G077700 Manihot esculenta HOM05D006086 ORTHO05D007396 1.3e-17 92.4 60 71.7
Lalb_Chr02g0142691 Lupinus albus HOM05D006086 ORTHO05D007396 1.7e-17 92.0 52 78.8
MD15G1146200 Malus domestica HOM05D006086 ORTHO05D007396 1.7e-17 92.0 53 77.4
Manes.09G155600 Manihot esculenta HOM05D006086 ORTHO05D007396 2.2e-17 91.7 55 76.4
ATR0737G002 Amborella trichopoda HOM05D006086 ORTHO05D007396 2.9e-17 91.3 70 70.0
CiPaw.08G106900 Carya illinoinensis HOM05D006086 ORTHO05D007396 4.2e-16 87.4 53 73.6
Os07g0204400 Oryza sativa ssp. japonica HOM05D006086 ORTHO05D007396 4.2e-16 87.4 54 66.7
Potri.013G037800 Populus trichocarpa HOM05D006086 ORTHO05D007396 4.2e-16 87.4 54 77.8
BraA03t13422Z Brassica rapa HOM05D006086 ORTHO05D007396 2.7e-15 84.7 49 79.6
COL.COLO4_12126 Corchorus olitorius HOM05D006086 ORTHO05D007396 2.7e-15 84.7 54 72.2
Sed0017079 Sechium edule HOM05D006086 ORTHO05D007396 4.6e-15 84.0 62 66.1
Lalb_Chr07g0189661 Lupinus albus HOM05D006086 ORTHO05D007396 7.9e-15 83.2 53 73.6
CSS0043804 Camellia sinensis var. sinensis HOM05D006086 ORTHO05D007396 1.3e-14 82.4 54 74.1
Medtr5g006220 Medicago truncatula HOM05D006086 ORTHO05D007396 1.8e-14 82.0 54 68.5
Dinv32919 Davidia involucrata HOM05D001893 ORTHO05D007396 3.0e-14 81.3 55 69.1
Hund09501 Selenicereus undatus HOM05D006086 ORTHO05D007396 5.1e-14 80.5 55 67.3
CsaV3_7G028010 Cucumis sativus L. HOM05D006086 ORTHO05D007396 1.1e-13 79.3 62 67.7
ClCG09G007150 Citrullus lanatus HOM05D006086 ORTHO05D007396 2.5e-13 78.2 63 65.1
HanXRQChr04g0118911 Helianthus annuus HOM05D006086 ORTHO05D007396 2.5e-13 78.2 58 60.3
Oeu034961.1 Olea europaea HOM05D006086 ORTHO05D007396 2.5e-13 78.2 53 62.3
Cc07_g10970 Coffea canephora HOM05D006086 ORTHO05D007396 3.3e-13 77.8 54 64.8
Lsat_1_v5_gn_8_56520 Lactuca sativa HOM05D006086 ORTHO05D007396 4.1e-11 70.9 54 61.1
Rhsim02G0023700 Rhododendron simsii HOM05D006086 ORTHO05D007396 1.3e-09 65.9 46 69.6
Actinidia00772 Actinidia chinensis HOM05D001893 ORTHO05D001914 8.5e-09 63.2 40 70.0
Medtr5g006260 Medicago truncatula HOM05D006086 ORTHO05D007396 1.1e-08 62.8 78 41.0
SEGI_00264 Sequoiadendron giganteum HOM05D006086 ORTHO05D007396 3.2e-08 61.2 52 55.8
SEGI_12043 Sequoiadendron giganteum HOM05D006086 ORTHO05D007396 3.2e-08 61.2 50 60.0
SEGI_39026 Sequoiadendron giganteum HOM05D006086 ORTHO05D007396 3.2e-08 61.2 37 73.0
Mapoly0080s0018 Marchantia polymorpha HOM05D006086 ORTHO05D007396 1.2e-07 59.3 58 41.4
DCAR_012810 Daucus carota HOM05D002570 ORTHO05D002689 1.8e-06 55.5 50 46.0


User provided reference genes

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