Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 3.2e-170 601.7 302 100.0
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 2.9e-115 419.1 302 68.9
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 3.8e-115 418.7 307 66.8
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 5.0e-115 418.3 314 67.5
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 8.5e-115 417.5 307 66.8
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 2.1e-113 412.9 309 67.3
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 4.7e-113 411.8 304 66.8
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 7.4e-111 404.4 285 67.7
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 5.3e-109 398.3 302 67.2
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 9.1e-109 397.5 297 66.0
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 8.5e-107 391.0 275 69.8
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 9.7e-103 377.5 301 65.1
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 5.3e-101 371.7 295 63.7
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 9.1e-101 370.9 297 63.6
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 2.5e-98 362.8 309 61.8
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 2.5e-98 362.8 305 60.3
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 4.4e-95 352.1 278 62.9
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 1.7e-94 350.1 301 58.1
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 2.4e-93 346.3 301 57.5
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 3.5e-92 342.4 296 57.1
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 2.5e-90 336.3 286 58.7
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 3.2e-90 335.9 304 55.3
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 5.5e-90 335.1 319 57.1
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 7.2e-90 334.7 309 54.4
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 9.4e-90 334.3 295 56.9
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 1.2e-89 334.0 282 58.5
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 1.4e-88 330.5 277 58.8
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.8e-88 330.1 280 59.6
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 8.8e-88 327.8 283 59.4
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 3.4e-87 325.9 286 56.6
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 4.4e-87 325.5 299 57.5
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 4.4e-87 325.5 291 57.7
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 2.8e-86 322.8 299 56.5
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 6.3e-86 321.6 293 59.0
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 1.4e-85 320.5 299 57.9
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 1.6e-84 317.0 288 57.6
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 2.0e-84 316.6 285 56.5
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 2.7e-84 316.2 279 54.5
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 3.5e-84 315.8 296 54.7
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 4.5e-84 315.5 279 57.7
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 4.5e-84 315.5 282 55.3
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 7.7e-84 314.7 297 53.5
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.3e-83 313.9 291 56.7
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.1e-82 310.8 302 57.3
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 6.1e-81 305.1 280 54.6
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 1.0e-80 304.3 293 53.6
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 5.2e-80 302.0 266 57.1
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 1.2e-79 300.8 284 54.9
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 1.2e-79 300.8 290 54.1
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.0e-79 300.1 284 54.9
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 7.8e-76 288.1 292 52.4
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 1.3e-75 287.3 296 51.4
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 8.6e-75 284.6 285 50.2
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 1.6e-73 280.4 285 53.0
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 2.1e-73 280.0 281 53.0
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 6.2e-73 278.5 260 57.3
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 1.0e-72 277.7 307 51.8
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 1.4e-72 277.3 280 53.9
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 1.7e-70 270.4 283 52.7
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 6.2e-65 251.9 206 60.7
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 6.2e-65 251.9 295 49.2
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 4.3e-58 229.2 220 53.2
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 3.4e-55 219.5 283 43.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 4.3e-50 202.6 171 62.0
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 1.4e-48 197.6 158 58.9
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 5.3e-40 169.1 184 48.4
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 2.1e-36 157.1 210 45.7
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 6.0e-36 155.6 118 64.4
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 1.9e-29 134.0 103 70.9
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 7.9e-28 128.6 497 24.9
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 2.4e-24 117.1 302 34.8
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 4.2e-21 106.3 82 64.6
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.3e-19 100.5 126 46.8
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 3.3e-10 70.1 39 74.4


User provided reference genes

Program Settings