Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023335.1 Olea europaea HOM05D001070 ORTHO05D002096 3.0e-82 308.5 164 100.0
Oeu022558.1 Olea europaea HOM05D001070 ORTHO05D002096 4.9e-40 168.3 112 81.2
Oeu010690.1 Olea europaea HOM05D001070 ORTHO05D002096 2.0e-38 162.9 111 81.1
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 1.9e-31 139.8 128 68.0
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 1.9e-31 139.8 128 68.0
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 2.9e-24 115.9 122 63.1
Solyc00g500040.1 Solanum lycopersicum HOM05D001070 ORTHO05D013014 1.1e-23 114.0 123 61.0
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-23 114.0 123 61.0
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-23 114.0 123 61.0
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.9e-23 113.2 121 62.0
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.9e-23 113.2 121 62.0
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.9e-23 113.2 121 62.0
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.9e-23 113.2 121 62.0
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.9e-23 113.2 121 62.0
Nitab4.5_0023521g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 2.1e-22 109.8 122 61.5
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 8.6e-21 104.4 117 60.7
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.3e-20 102.4 116 60.3
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.3e-20 102.4 116 60.3
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.3e-20 102.4 116 60.3
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.3e-20 102.4 116 60.3
Ciclev10013999m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.3e-20 102.4 116 60.3
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.3e-20 102.4 116 60.3
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.3e-20 102.4 108 61.1
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.3e-20 102.4 116 60.3
Nitab4.5_0002628g0020 Nicotiana tabacum HOM05D001070 ORTHO05D002096 4.3e-20 102.1 120 59.2
Solyc11g044680.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-19 100.5 122 58.2
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 2.1e-19 99.8 120 60.0
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 6.2e-19 98.2 84 72.6
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 6.2e-19 98.2 84 72.6
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.1e-18 95.9 81 71.6
Peaxi162Scf00130g00416 Petunia axillaris HOM05D001070 ORTHO05D002096 6.8e-18 94.7 78 73.1
Peaxi162Scf00338g00618 Petunia axillaris HOM05D001070 ORTHO05D002096 6.8e-18 94.7 78 73.1
Peaxi162Scf00536g00047 Petunia axillaris HOM05D001070 ORTHO05D002096 6.8e-18 94.7 78 73.1
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 2.2e-16 89.7 78 69.2
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.9e-16 89.4 103 57.3
TAR624G0722 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.4e-15 85.1 85 62.4
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.4e-15 85.1 85 62.4
TAR626G0349 Trochodendron aralioides HOM05D001070 ORTHO05D002096 9.2e-15 84.3 86 61.6
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 3.5e-14 82.4 68 72.1
Solyc02g011860.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.5e-14 82.4 107 55.1
Solyc12g036550.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.0e-13 79.3 70 71.4
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 6.6e-13 78.2 108 48.1
Migut.D01245 Erythranthe guttata HOM05D001070 ORTHO05D002096 1.5e-12 77.0 82 58.5
Oeu012767.1 Olea europaea HOM05D001070 ORTHO05D002096 1.5e-12 77.0 63 74.6
CAN.G965.9 Capsicum annuum HOM05D001070 ORTHO05D002096 2.5e-12 76.3 94 55.3
Sed0002593 Sechium edule HOM05D001070 ORTHO05D002096 4.3e-12 75.5 88 55.7
Sed0025207 Sechium edule HOM05D001070 ORTHO05D002096 4.3e-12 75.5 88 55.7
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 9.6e-12 74.3 68 66.2
Sed0021842 Sechium edule HOM05D001070 ORTHO05D002096 9.6e-12 74.3 98 51.0
Sed0000142 Sechium edule HOM05D001070 ORTHO05D002096 2.1e-11 73.2 73 58.9
Aqoxy4G02031 Aquilegia oxysepala HOM05D001070 ORTHO05D002096 2.8e-11 72.8 111 49.5
Sed0025623 Sechium edule HOM05D001070 ORTHO05D002096 6.2e-11 71.6 70 60.0
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 1.1e-10 70.9 52 75.0
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.1e-10 69.3 82 57.3
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 6.9e-10 68.2 62 59.7
Sc04g0003130 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.2e-09 67.4 112 49.1
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 9.9e-09 64.3 110 50.0
Peaxi162Scf00080g00516 Petunia axillaris HOM05D001070 ORTHO05D002096 9.9e-09 64.3 99 47.5
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 4.9e-08 62.0 115 47.0
Sed0020782 Sechium edule HOM05D001070 ORTHO05D002096 3.2e-07 59.3 60 61.7
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 4.2e-07 58.9 50 72.0
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 4.2e-07 58.9 50 72.0
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 7.8e-06 54.7 85 49.4


User provided reference genes

Program Settings