Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 2.3e-76 288.9 151 100.0
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 5.4e-70 267.7 187 79.7
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 3.0e-52 208.8 153 71.9
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 6.7e-52 207.6 152 70.4
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.5e-51 206.5 153 71.2
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 1.6e-50 203.0 132 80.3
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 3.7e-50 201.8 167 66.5
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 3.1e-49 198.7 134 75.4
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.2e-48 196.8 152 69.7
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.0e-48 196.1 130 78.5
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 3.4e-48 195.3 138 76.1
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 4.5e-48 194.9 152 71.7
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 7.6e-48 194.1 134 73.9
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 2.2e-47 192.6 135 77.0
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 6.5e-47 191.0 152 67.1
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 1.1e-46 190.3 121 79.3
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 1.4e-46 189.9 130 74.6
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 1.9e-46 189.5 152 67.1
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 3.2e-46 188.7 117 82.9
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 4.2e-46 188.3 124 77.4
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.1e-46 187.6 140 72.1
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.2e-45 186.8 133 73.7
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 4.6e-45 184.9 140 71.4
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 1.0e-44 183.7 147 67.3
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 1.0e-44 183.7 128 76.6
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 1.0e-44 183.7 116 81.0
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 1.3e-44 183.3 128 78.1
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 1.8e-44 183.0 135 74.1
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 3.0e-44 182.2 118 81.4
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 3.0e-44 182.2 119 81.5
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 3.0e-44 182.2 137 72.3
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 3.0e-44 182.2 125 74.4
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.9e-44 181.8 140 70.7
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 5.1e-44 181.4 131 76.3
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 6.7e-44 181.0 139 68.3
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.5e-43 179.9 146 67.1
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 2.5e-43 179.1 134 73.9
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 2.5e-43 179.1 151 64.9
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 3.3e-43 178.7 122 75.4
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 4.3e-43 178.3 132 74.2
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 4.3e-43 178.3 131 73.3
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 5.7e-43 177.9 135 72.6
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 7.4e-43 177.6 122 74.6
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.4e-43 177.6 139 68.3
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 9.6e-43 177.2 151 64.9
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 9.6e-43 177.2 120 77.5
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.3e-42 176.8 138 71.0
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 1.3e-42 176.8 154 65.6
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 1.3e-42 176.8 139 69.1
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.3e-42 176.8 122 78.7
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 1.6e-42 176.4 122 73.8
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 2.8e-42 175.6 120 78.3
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.7e-42 175.3 139 68.3
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 3.7e-42 175.3 122 77.9
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 3.7e-42 175.3 155 68.4
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 4.8e-42 174.9 141 70.9
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 6.3e-42 174.5 130 74.6
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 8.2e-42 174.1 125 76.0
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 1.1e-41 173.7 135 71.1
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.8e-41 172.9 125 75.2
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 1.8e-41 172.9 125 76.0
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 1.8e-41 172.9 131 69.5
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 1.8e-41 172.9 135 67.4
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 1.8e-41 172.9 133 66.2
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.8e-41 172.9 119 76.5
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 1.8e-41 172.9 119 79.0
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 2.4e-41 172.6 125 76.0
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 2.4e-41 172.6 127 75.6
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 3.1e-41 172.2 127 73.2
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 4.1e-41 171.8 152 67.8
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 6.9e-41 171.0 126 70.6
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 9.0e-41 170.6 120 75.8
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 9.0e-41 170.6 125 75.2
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 1.2e-40 170.2 134 67.9
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.0e-40 169.5 124 75.8
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 2.0e-40 169.5 127 74.0
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 2.0e-40 169.5 119 75.6
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 2.0e-40 169.5 123 73.2
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 2.6e-40 169.1 127 73.2
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 2.6e-40 169.1 117 75.2
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 5.9e-40 167.9 120 77.5
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 5.9e-40 167.9 130 66.9
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 7.6e-40 167.5 132 68.9
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 1.0e-39 167.2 143 65.0
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 1.3e-39 166.8 116 73.3
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 2.2e-39 166.0 127 72.4
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 2.9e-39 165.6 118 75.4
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 2.9e-39 165.6 130 71.5
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.9e-39 165.6 132 68.9
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 2.9e-39 165.6 132 68.2
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 2.9e-39 165.6 132 65.9
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 5.0e-39 164.9 130 70.8
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 6.5e-39 164.5 118 76.3
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 6.5e-39 164.5 133 67.7
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 8.5e-39 164.1 128 73.4
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 8.5e-39 164.1 125 70.4
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.9e-38 162.9 118 72.9
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 3.2e-38 162.2 129 68.2
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.7e-37 159.1 130 68.5
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 3.6e-37 158.7 127 69.3
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 3.6e-37 158.7 127 69.3
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 1.0e-36 157.1 155 60.0
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 2.3e-36 156.0 114 72.8
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.0e-36 155.6 118 69.5
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 5.1e-36 154.8 156 59.0
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 1.1e-35 153.7 126 66.7
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.5e-35 153.3 141 61.7
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 1.6e-34 149.8 128 67.2
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 4.8e-34 148.3 152 58.6
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.1e-33 147.1 78 92.3
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 5.9e-32 141.4 89 79.8
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 1.3e-31 140.2 133 56.4
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.2e-29 133.7 102 71.6
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 4.6e-29 131.7 115 61.7
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 6.1e-29 131.3 82 81.7
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.8e-28 129.8 94 74.5
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 6.7e-28 127.9 75 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 5.3e-25 118.2 88 64.8
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 4.5e-24 115.2 88 67.0
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.0e-23 114.0 108 57.4
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.7e-23 113.2 123 53.7
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 2.7e-21 105.9 117 47.9
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 6.7e-20 101.3 75 62.7
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 5.7e-19 98.2 78 62.8
MSTRG.9877 Avicennia marina HOM05D006230 ORTHO05D007598 3.5e-16 89.0 74 66.2
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 1.0e-15 87.4 98 49.0
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 2.9e-15 85.9 122 45.1
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 1.0e-07 60.8 65 47.7
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.3e-07 60.5 36 86.1


User provided reference genes

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