Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023283.1 Olea europaea HOM05D004401 ORTHO05D005169 2.1e-50 202.2 114 100.0
Oeu020614.1 Olea europaea HOM05D004401 ORTHO05D005169 2.3e-41 172.2 112 88.4
MSTRG.15405 Avicennia marina HOM05D004401 ORTHO05D005169 1.5e-32 142.9 113 67.3
Dinv26777 Davidia involucrata HOM05D004401 ORTHO05D005169 4.4e-32 141.4 112 67.0
Migut.K00842 Erythranthe guttata HOM05D004401 ORTHO05D005169 5.8e-32 141.0 94 75.5
Dinv39923 Davidia involucrata HOM05D004401 ORTHO05D005169 1.3e-31 139.8 94 75.5
vmacro05286 Vaccinium macrocarpon HOM05D004401 ORTHO05D005169 1.7e-31 139.4 113 63.7
Cfa004233 Carpinus fangiana HOM05D004401 ORTHO05D005169 3.8e-31 138.3 113 60.2
Haze_15165 Corylus avellana HOM05D004401 ORTHO05D005169 6.4e-31 137.5 113 60.2
SalBow1G0657 Salvia bowleyana HOM05D004401 ORTHO05D005169 6.4e-31 137.5 92 73.9
SalBow1G3467 Salvia bowleyana HOM05D004401 ORTHO05D005169 6.4e-31 137.5 92 73.9
CSS0030032 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 1.1e-30 136.7 112 62.5
CSS0031085 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 1.1e-30 136.7 112 62.5
CiPaw.01G029200 Carya illinoinensis HOM05D004401 ORTHO05D005169 1.4e-30 136.3 112 63.4
CAN.G836.19 Capsicum annuum HOM05D004401 ORTHO05D005169 5.4e-30 134.4 94 70.2
QL06p044258 Quercus lobata HOM05D004401 ORTHO05D005169 7.1e-30 134.0 112 59.8
Hma1.2p1_0739F.1_g211280 Hydrangea macrophylla HOM05D004401 ORTHO05D005169 9.2e-30 133.7 92 75.0
Glyma.01G181200 Glycine max HOM05D004401 ORTHO05D005169 3.5e-29 131.7 113 59.3
Glyma.11G061000 Glycine max HOM05D004401 ORTHO05D005169 3.5e-29 131.7 113 58.4
Prupe.7G145400 Prunus persica HOM05D004401 ORTHO05D005169 3.5e-29 131.7 94 67.0
RhsimUnG0212100 Rhododendron simsii HOM05D004401 ORTHO05D005169 4.6e-29 131.3 94 70.2
PGSC0003DMG400010033 Solanum tuberosum HOM05D004401 ORTHO05D005169 7.8e-29 130.6 93 68.8
GSVIVG01003774001 Vitis vinifera HOM05D004401 ORTHO05D005169 1.3e-28 129.8 94 67.0
Actinidia12088 Actinidia chinensis HOM05D004401 ORTHO05D005169 1.7e-28 129.4 111 62.2
Peaxi162Scf00535g00620 Petunia axillaris HOM05D004401 ORTHO05D005169 2.3e-28 129.0 110 59.1
MD02G1158400 Malus domestica HOM05D004401 ORTHO05D005169 3.0e-28 128.6 111 58.6
Solyc02g090090.3 Solanum lycopersicum HOM05D004401 ORTHO05D005169 3.0e-28 128.6 94 66.0
Ca_24810_v3 Cicer arietinum L. HOM05D004401 ORTHO05D005169 3.9e-28 128.3 113 57.5
Nitab4.5_0005594g0020 Nicotiana tabacum HOM05D004401 ORTHO05D005169 3.9e-28 128.3 112 58.0
PGR102G2627 Punica granatum HOM05D004401 ORTHO05D005169 3.9e-28 128.3 92 69.6
Sopen02g034780 Solanum pennellii HOM05D004401 ORTHO05D005169 3.9e-28 128.3 112 56.2
Cc07_g05390 Coffea canephora HOM05D004401 ORTHO05D005169 5.1e-28 127.9 90 71.1
VMungo1215G0638 Vigna mungo HOM05D004401 ORTHO05D005169 1.1e-27 126.7 94 64.9
Manes.13G132200 Manihot esculenta HOM05D004401 ORTHO05D005169 1.5e-27 126.3 92 69.6
Nitab4.5_0000108g0170 Nicotiana tabacum HOM05D004401 ORTHO05D005169 1.5e-27 126.3 112 57.1
TPR.G29860 Trifolium pratense HOM05D004401 ORTHO05D005169 1.9e-27 125.9 112 58.0
Hma1.2p1_0261F.1_g104910 Hydrangea macrophylla HOM05D004401 ORTHO05D005169 2.5e-27 125.6 94 67.0
Medtr5g018600 Medicago truncatula HOM05D004401 ORTHO05D005169 2.5e-27 125.6 112 57.1
FAN23G0479 Fragaria x ananassa HOM05D004401 ORTHO05D005169 3.3e-27 125.2 113 55.8
FvH4_1g14490 Fragaria vesca HOM05D004401 ORTHO05D005169 4.3e-27 124.8 94 62.8
FAN19G2756 Fragaria x ananassa HOM05D004401 ORTHO05D005169 5.6e-27 124.4 94 62.8
FAN26G1141 Fragaria x ananassa HOM05D004401 ORTHO05D005169 7.3e-27 124.0 94 62.8
RcHm_v2.0_Chr2g0103241 Rosa chinensis HOM05D004401 ORTHO05D005169 9.6e-27 123.6 94 62.8
COL.COLO4_22179 Corchorus olitorius HOM05D004401 ORTHO05D005169 2.1e-26 122.5 92 65.2
FAN28G2641 Fragaria x ananassa HOM05D004401 ORTHO05D005169 2.8e-26 122.1 94 61.7
MD15G1273200 Malus domestica HOM05D004401 ORTHO05D005169 3.6e-26 121.7 113 54.9
arahy.Tifrunner.gnm1.ann1.6IB1GK Arachis hypogaea HOM05D004401 ORTHO05D005169 4.7e-26 121.3 94 62.8
Atru.chr3.472 Acer truncatum HOM05D004401 ORTHO05D005169 6.2e-26 120.9 110 56.4
Lalb_Chr05g0213081 Lupinus albus HOM05D004401 ORTHO05D005169 6.2e-26 120.9 94 63.8
CsaV3_2G017130 Cucumis sativus L. HOM05D004401 ORTHO05D005169 8.1e-26 120.6 92 67.4
unitig_0.g2308 Utricularia gibba HOM05D004401 ORTHO05D005169 1.1e-25 120.2 94 62.8
Ciclev10025507m.g Citrus clementina HOM05D004401 ORTHO05D005169 1.4e-25 119.8 94 63.8
Lj2g0012735 Lotus japonicus HOM05D004401 ORTHO05D005169 1.4e-25 119.8 114 57.9
Lj4A136G82 Lonicera japonica HOM05D004401 ORTHO05D005169 1.8e-25 119.4 112 58.0
Hund14120 Selenicereus undatus HOM05D004401 ORTHO05D005169 2.4e-25 119.0 94 67.0
Lalb_Chr09g0322851 Lupinus albus HOM05D004401 ORTHO05D005169 3.1e-25 118.6 112 54.5
Rhsim08G0109400 Rhododendron simsii HOM05D004401 ORTHO05D005169 4.0e-25 118.2 92 67.4
Phvul.002G023700 Phaseolus vulgaris HOM05D004401 ORTHO05D005169 5.2e-25 117.9 106 56.6
vmacro17880 Vaccinium macrocarpon HOM05D004401 ORTHO05D005169 8.9e-25 117.1 92 66.3
CANSAT01G2530 Cannabis sativa HOM05D004401 ORTHO05D005169 1.2e-24 116.7 94 61.7
Nn6g32163 Nelumbo nucifera HOM05D004401 ORTHO05D005169 1.2e-24 116.7 94 62.8
MELO3C020916.2 Cucumis melo HOM05D004401 ORTHO05D005169 2.6e-24 115.5 92 65.2
Thecc.01G045700 Theobroma cacao HOM05D004401 ORTHO05D005169 2.6e-24 115.5 92 63.0
MBI16_g31340_MAGBIO Magnolia biondii HOM05D004401 ORTHO05D005169 4.4e-24 114.8 94 61.7
TAR625G0432 Trochodendron aralioides HOM05D004401 ORTHO05D005169 4.4e-24 114.8 94 61.7
Eucgr.H01940 Eucalyptus grandis HOM05D004401 ORTHO05D005169 5.8e-24 114.4 113 57.5
Sabra05G0106100 Salix brachista HOM05D004401 ORTHO05D005169 5.8e-24 114.4 109 54.1
AUR62027242 Chenopodium quinoa HOM05D004401 ORTHO05D005169 1.3e-23 113.2 94 63.8
arahy.Tifrunner.gnm1.ann1.ZW82SR Arachis hypogaea HOM05D004401 ORTHO05D005169 1.7e-23 112.8 101 57.4
AUR62003232 Chenopodium quinoa HOM05D004401 ORTHO05D005169 2.2e-23 112.5 94 62.8
Potri.005G130800 Populus trichocarpa HOM05D004401 ORTHO05D005169 2.9e-23 112.1 108 54.6
Ah.02g126040 Amaranthus hybridus HOM05D004401 ORTHO05D005169 4.9e-23 111.3 94 60.6
Lsat_1_v5_gn_4_177820 Lactuca sativa HOM05D004401 ORTHO05D005169 6.4e-23 110.9 89 65.2
TWI73G0228 Tripterygium wilfordii HOM05D004401 ORTHO05D005169 6.4e-23 110.9 110 53.6
ClCG02G013050 Citrullus lanatus HOM05D004401 ORTHO05D005169 1.4e-22 109.8 92 64.1
Aqoxy5G01748 Aquilegia oxysepala HOM05D004401 ORTHO05D005169 1.9e-22 109.4 92 63.0
EL10Ac6g14845 Beta vulgaris HOM05D004401 ORTHO05D005169 1.9e-22 109.4 113 52.2
Glyma.06G250700 Glycine max HOM05D004401 ORTHO05D005169 3.2e-22 108.6 79 63.3
DCAR_025670 Daucus carota HOM05D004401 ORTHO05D005169 4.2e-22 108.2 93 58.1
Gohir.A11G045000 Gossypium hirsutum HOM05D004401 ORTHO05D005169 4.2e-22 108.2 92 62.0
Sabra07G0029800 Salix brachista HOM05D004401 ORTHO05D005169 5.4e-22 107.8 92 58.7
Gohir.A02G161600 Gossypium hirsutum HOM05D004401 ORTHO05D005169 7.1e-22 107.5 91 60.4
Gohir.D03G018900 Gossypium hirsutum HOM05D004401 ORTHO05D005169 7.1e-22 107.5 91 60.4
Gorai.003G019300 Gossypium raimondii HOM05D004401 ORTHO05D005169 9.3e-22 107.1 91 60.4
Sed0006552 Sechium edule HOM05D004401 ORTHO05D005169 9.3e-22 107.1 92 58.7
Gorai.007G052100 Gossypium raimondii HOM05D004401 ORTHO05D005169 1.2e-21 106.7 92 60.9
Potri.007G034200 Populus trichocarpa HOM05D004401 ORTHO05D005169 1.2e-21 106.7 109 53.2
GSVIVG01003776001 Vitis vinifera HOM05D004401 ORTHO05D005169 1.2e-21 106.7 67 74.6
THA.LOC104807569 Tarenaya hassleriana HOM05D004401 ORTHO05D005169 2.1e-21 105.9 90 63.3
TAR381G0351 Trochodendron aralioides HOM05D004401 ORTHO05D005169 2.1e-21 105.9 95 60.0
Carub.0007s0340 Capsella rubella HOM05D004401 ORTHO05D005169 2.7e-21 105.5 92 60.9
Gohir.D11G048500 Gossypium hirsutum HOM05D004401 ORTHO05D005169 4.6e-21 104.8 92 59.8
HanXRQChr09g0264391 Helianthus annuus HOM05D004401 ORTHO05D005169 4.6e-21 104.8 93 60.2
Cpa.g.sc15.60 Carica papaya HOM05D004401 ORTHO05D005169 7.8e-21 104.0 93 61.3
HanXRQChr15g0489601 Helianthus annuus HOM05D004401 ORTHO05D005169 1.3e-20 103.2 93 59.1
ECA232G2743 Erigeron canadensis HOM05D004401 ORTHO05D005169 1.7e-20 102.8 96 58.3
C03p79770 Brassica napus HOM05D004401 ORTHO05D005169 2.3e-20 102.4 91 60.4
Thhalv10025057m.g Eutrema salsugineum HOM05D004401 ORTHO05D005169 2.3e-20 102.4 91 64.8
A08p22480 Brassica napus HOM05D004401 ORTHO05D005169 3.0e-20 102.1 91 60.4
BolC3t20224H Brassica oleracea HOM05D004401 ORTHO05D005169 3.9e-20 101.7 91 60.4
CARHR245290 Cardamine hirsuta HOM05D004401 ORTHO05D005169 3.9e-20 101.7 93 60.2
PSO700G0114 Papaver somniferum HOM05D004401 ORTHO05D005169 3.9e-20 101.7 94 52.1
SHI08724 Sapria himalayana HOM05D004401 ORTHO05D005169 3.9e-20 101.7 91 59.3
BraA08t34203Z Brassica rapa HOM05D004401 ORTHO05D005169 6.6e-20 100.9 91 59.3
Duzib147G0010 Durio zibethinus HOM05D004401 ORTHO05D005169 8.7e-20 100.5 108 50.0
PSO170G1133 Papaver somniferum HOM05D004401 ORTHO05D005169 8.7e-20 100.5 94 51.1
Os07g0122400 Oryza sativa ssp. japonica HOM05D004401 ORTHO05D005169 2.5e-19 99.0 90 57.8
Aa31LG6G13770 Aethionema arabicum HOM05D004401 ORTHO05D005169 7.3e-19 97.4 91 58.2
Sp7g34580 Schrenkiella parvula HOM05D004401 ORTHO05D005169 1.3e-18 96.7 91 58.2
CDE06G0525 Ceratophyllum demersum HOM05D004401 ORTHO05D005169 1.6e-18 96.3 93 53.8
AL7G14010 Arabidopsis lyrata HOM05D004401 ORTHO05D005169 4.8e-18 94.7 91 56.0
Duzib264G0051 Durio zibethinus HOM05D004401 ORTHO05D005169 8.1e-18 94.0 71 63.4
CDE04G2769 Ceratophyllum demersum HOM05D004401 ORTHO05D005169 1.1e-17 93.6 91 53.8
AT4G37210 Arabidopsis thaliana HOM05D004401 ORTHO05D005169 1.4e-17 93.2 91 57.1
Zm00001eb117930 Zea mays HOM05D004401 ORTHO05D005169 1.8e-17 92.8 90 55.6
BraA01t00189Z Brassica rapa HOM05D004401 ORTHO05D005169 9.0e-17 90.5 92 55.4
Gorai.007G208200 Gossypium raimondii HOM05D004401 ORTHO05D005169 9.0e-17 90.5 92 52.2
Gohir.A11G188200 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.2e-16 90.1 92 51.1
Lsat_1_v5_gn_1_2961 Lactuca sativa HOM05D004401 ORTHO05D005169 1.2e-16 90.1 67 62.7
A01p02010 Brassica napus HOM05D004401 ORTHO05D005169 1.5e-16 89.7 92 55.4
Ah.03g142140 Amaranthus hybridus HOM05D004401 ORTHO05D005169 3.4e-16 88.6 67 68.7
HPP92_019643 Vanilla planifolia HOM05D004401 ORTHO05D005169 4.5e-16 88.2 80 60.0
C01p02190 Brassica napus HOM05D004401 ORTHO05D005169 2.9e-15 85.5 91 52.7
BolC1t00211H Brassica oleracea HOM05D004401 ORTHO05D005169 2.9e-15 85.5 91 52.7
Sc03g0001200 Simmondsia chinensis HOM05D004401 ORTHO05D005169 2.9e-15 85.5 61 68.9
ATR0733G114 Amborella trichopoda HOM05D004401 ORTHO05D005169 6.4e-15 84.3 98 52.0
Gohir.D11G194700 Gossypium hirsutum HOM05D004401 ORTHO05D005169 6.4e-15 84.3 92 50.0
Sc07g0000180 Simmondsia chinensis HOM05D004401 ORTHO05D005169 3.0e-12 75.5 62 56.5
Mapoly0080s0039 Marchantia polymorpha HOM05D004401 ORTHO05D005169 5.1e-12 74.7 57 61.4
Sed0017517 Sechium edule HOM05D004401 ORTHO05D005169 6.7e-12 74.3 93 47.3
Pp3c24_5960 Physcomitrium patens HOM05D004401 ORTHO05D005169 5.6e-11 71.2 57 57.9
AagrBONN_evm.TU.Sc2ySwM_228.4759 Anthoceros agrestis HOM05D004401 ORTHO05D005169 1.1e-09 67.0 94 46.8
CBR_g26200 Chara braunii HOM05D004401 ORTHO05D005169 2.6e-08 62.4 57 54.4
SEGI_23846 Sequoiadendron giganteum HOM05D004401 ORTHO05D005169 1.4e-06 56.6 57 50.9
SMO358G0116 Selaginella moellendorffii HOM05D004401 ORTHO05D005169 1.9e-06 56.2 55 50.9
Psat0s4627g0120 Pisum sativum HOM05D004401 ORTHO05D005169 7.1e-06 54.3 77 42.9


User provided reference genes

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