Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 9.1e-251 869.8 441 100.0
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 3.2e-155 552.4 435 66.7
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 6.1e-154 548.1 307 87.3
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.0e-153 547.4 307 87.3
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 5.7e-152 541.6 307 86.6
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 9.7e-152 540.8 433 66.7
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 6.3e-151 538.1 305 85.6
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 2.4e-150 536.2 306 84.6
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 4.1e-150 535.4 307 84.4
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 9.1e-150 534.3 306 84.3
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.5e-149 533.5 312 82.4
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.5e-149 532.3 306 84.0
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 7.7e-149 531.2 312 80.4
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 7.7e-149 531.2 312 82.1
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.3e-148 530.4 312 82.1
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.3e-148 530.4 307 83.7
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 1.7e-148 530.0 312 82.7
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 2.2e-148 529.6 312 83.3
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 2.9e-148 529.3 310 82.9
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 2.9e-148 529.3 306 84.3
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 8.5e-148 527.7 303 84.5
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 8.5e-148 527.7 307 82.4
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.1e-147 527.3 312 81.1
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.4e-147 526.9 307 83.1
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.4e-147 526.9 307 82.7
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.4e-147 526.9 312 79.8
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.9e-147 526.6 312 81.4
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.9e-147 526.6 305 81.6
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 2.5e-147 526.2 305 83.0
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 9.4e-147 524.2 312 81.7
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 9.4e-147 524.2 305 82.6
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 9.4e-147 524.2 311 82.0
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.6e-146 523.5 306 81.4
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 2.1e-146 523.1 429 63.6
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 2.7e-146 522.7 310 82.3
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 2.7e-146 522.7 312 79.2
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 6.1e-146 521.5 312 82.4
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 8.0e-146 521.2 312 82.1
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 5.2e-145 518.5 311 81.7
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.1e-144 517.3 300 82.7
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.5e-144 516.9 312 78.5
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 2.6e-144 516.2 299 83.6
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 3.3e-144 515.8 312 77.9
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 5.7e-144 515.0 302 82.1
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 5.7e-144 515.0 303 82.5
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 5.7e-144 515.0 312 78.8
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 9.7e-144 514.2 429 62.5
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.7e-143 513.5 310 79.4
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.7e-143 513.5 303 81.5
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.7e-143 513.5 312 77.2
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 3.7e-143 512.3 310 79.0
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 3.7e-143 512.3 310 79.0
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 3.7e-143 512.3 304 81.6
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 3.7e-143 512.3 307 81.8
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 4.8e-143 511.9 310 79.0
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 6.3e-143 511.5 303 83.2
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 6.3e-143 511.5 313 80.2
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 6.3e-143 511.5 312 76.9
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.1e-142 510.8 310 79.4
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.4e-142 510.4 310 78.4
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.8e-142 510.0 312 76.6
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.4e-142 509.6 312 76.6
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 3.1e-142 509.2 311 78.8
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 4.1e-142 508.8 421 63.9
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 5.3e-142 508.4 310 79.0
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 7.0e-142 508.1 307 79.5
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.6e-141 506.9 312 81.1
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 1.6e-141 506.9 309 76.4
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.6e-141 506.9 307 78.2
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 2.0e-141 506.5 310 78.1
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.6e-141 506.1 306 78.4
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 3.5e-141 505.8 307 79.2
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.9e-140 502.7 303 79.5
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 5.0e-140 501.9 310 78.7
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 3.6e-138 495.7 309 80.3
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.3e-137 493.0 306 76.8
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 6.3e-135 485.0 306 77.5
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.4e-134 483.8 297 78.8
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.4e-134 483.8 312 78.8
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.4e-134 483.8 305 76.1
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 2.9e-132 476.1 311 74.6
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 8.5e-132 474.6 312 75.6
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.6e-128 463.0 264 86.4
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 1.1e-126 457.6 307 71.7
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 2.0e-125 453.4 304 70.1
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 4.4e-120 435.6 256 84.4
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 9.8e-120 434.5 307 67.4
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 6.3e-119 431.8 308 68.2
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 9.2e-118 427.9 312 70.5
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.7e-111 407.1 231 88.3
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 6.0e-109 398.7 312 65.4
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.3e-108 397.5 357 58.3
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 8.6e-108 394.8 302 69.2
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 1.6e-106 390.6 426 55.4
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 6.2e-106 388.7 609 42.7
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 2.3e-105 386.7 304 66.1
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 3.4e-104 382.9 224 83.9
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.0e-96 357.1 212 81.6
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.4e-89 334.3 276 64.9
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 1.2e-80 304.7 296 55.4
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 5.1e-76 289.3 169 81.1
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 9.0e-73 278.5 186 75.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 9.9e-72 275.0 220 58.6
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 5.6e-67 259.2 365 39.5
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 7.6e-64 248.8 321 44.2
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 6.2e-58 229.2 130 83.1
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 6.7e-52 209.1 129 79.1
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 2.2e-50 204.1 328 39.9
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.2e-46 190.3 128 74.2
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.4e-44 184.9 347 34.3
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.3e-39 168.3 97 82.5
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 6.1e-37 159.5 102 71.6
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.5e-35 154.8 84 83.3
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.2e-24 118.6 81 70.4
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.7e-24 117.5 65 83.1
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 8.3e-18 95.9 76 61.8
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.4e-17 94.4 56 87.5
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.8e-10 70.9 44 63.6
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 7.7e-08 62.8 143 32.2


User provided reference genes

Program Settings