Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 9.1e-54 213.4 113 100.0
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 1.7e-47 192.6 113 91.2
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 4.2e-43 177.9 113 81.4
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 3.6e-42 174.9 113 80.5
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 4.0e-41 171.4 112 78.6
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 8.8e-41 170.2 112 77.7
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 8.8e-41 170.2 113 81.4
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 2.0e-40 169.1 113 77.9
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.4e-40 168.3 113 77.0
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 5.7e-40 167.5 113 76.1
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 7.5e-40 167.2 112 78.6
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 9.8e-40 166.8 113 79.6
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 1.7e-39 166.0 112 75.9
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 2.2e-39 165.6 112 76.8
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 4.8e-39 164.5 113 77.0
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 6.3e-39 164.1 113 75.2
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 8.3e-39 163.7 113 77.0
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 8.3e-39 163.7 113 74.3
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.1e-38 163.3 110 75.5
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 1.4e-38 162.9 112 75.9
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 1.8e-38 162.5 113 74.3
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.4e-38 162.2 110 75.5
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.1e-38 161.8 112 74.1
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.1e-38 161.4 112 72.3
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.1e-38 161.4 112 72.3
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 4.1e-38 161.4 113 74.3
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.4e-38 161.0 110 75.5
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 9.1e-38 160.2 113 74.3
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 1.2e-37 159.8 113 73.5
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 1.2e-37 159.8 112 75.0
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 1.6e-37 159.5 112 71.4
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.6e-37 159.5 113 77.0
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 1.6e-37 159.5 120 74.2
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 2.0e-37 159.1 113 72.6
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 3.5e-37 158.3 112 75.0
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 4.5e-37 157.9 113 72.6
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 4.5e-37 157.9 112 74.1
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 4.5e-37 157.9 114 72.8
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 5.9e-37 157.5 113 72.6
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 5.9e-37 157.5 112 72.3
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 5.9e-37 157.5 114 71.9
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 5.9e-37 157.5 120 73.3
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 7.7e-37 157.1 112 73.2
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 7.7e-37 157.1 110 73.6
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 1.0e-36 156.8 113 69.9
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 1.3e-36 156.4 114 71.1
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 1.3e-36 156.4 113 69.9
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.7e-36 156.0 112 70.5
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.7e-36 156.0 112 70.5
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.7e-36 156.0 113 73.5
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 2.2e-36 155.6 113 70.8
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 2.2e-36 155.6 127 67.7
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 2.9e-36 155.2 114 71.1
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 2.9e-36 155.2 114 71.1
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 2.9e-36 155.2 114 71.1
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 2.9e-36 155.2 113 71.7
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 2.9e-36 155.2 113 73.5
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 3.8e-36 154.8 113 69.9
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 3.8e-36 154.8 114 72.8
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 3.8e-36 154.8 113 71.7
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 5.0e-36 154.5 112 73.2
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 5.0e-36 154.5 114 72.8
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 6.5e-36 154.1 113 69.0
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 8.5e-36 153.7 113 67.3
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 1.1e-35 153.3 110 74.5
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 1.1e-35 153.3 113 70.8
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.9e-35 152.5 113 70.8
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.9e-35 152.5 113 69.9
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 2.5e-35 152.1 114 73.7
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 2.5e-35 152.1 112 71.4
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 2.5e-35 152.1 113 71.7
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 3.2e-35 151.8 110 70.9
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 4.2e-35 151.4 110 70.9
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 5.5e-35 151.0 118 71.2
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 5.5e-35 151.0 114 71.9
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 7.2e-35 150.6 114 68.4
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 7.2e-35 150.6 113 68.1
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 7.2e-35 150.6 112 67.9
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 7.2e-35 150.6 113 69.9
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 9.5e-35 150.2 116 67.2
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 9.5e-35 150.2 116 68.1
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 1.6e-34 149.4 108 72.2
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 2.1e-34 149.1 114 67.5
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 2.1e-34 149.1 113 70.8
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 2.8e-34 148.7 109 72.5
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 2.8e-34 148.7 111 69.4
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 3.6e-34 148.3 114 69.3
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 3.6e-34 148.3 114 69.3
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 3.6e-34 148.3 114 69.3
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 3.6e-34 148.3 114 68.4
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 3.6e-34 148.3 114 69.3
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 3.6e-34 148.3 116 69.0
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 8.0e-34 147.1 111 66.7
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 8.0e-34 147.1 113 69.0
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 8.0e-34 147.1 116 65.5
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 1.0e-33 146.7 113 69.9
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 2.3e-33 145.6 114 68.4
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 2.3e-33 145.6 114 68.4
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 2.3e-33 145.6 111 68.5
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 2.3e-33 145.6 112 66.1
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 2.3e-33 145.6 113 69.9
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 2.3e-33 145.6 115 68.7
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 5.2e-33 144.4 113 68.1
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 3.4e-32 141.7 112 67.0
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 5.7e-32 141.0 113 67.3
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 7.5e-32 140.6 111 64.9
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 9.8e-32 140.2 111 64.9
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 1.3e-31 139.8 123 62.6
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 1.7e-31 139.4 113 65.5
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 2.2e-31 139.0 113 63.7
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 2.8e-31 138.7 111 63.1
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 3.7e-31 138.3 115 64.3
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 3.7e-31 138.3 111 63.1
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 6.3e-31 137.5 112 63.4
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 4.1e-30 134.8 112 61.6
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 5.4e-30 134.4 167 47.9
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 5.4e-30 134.4 167 47.9
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 2.7e-29 132.1 106 68.9
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 3.5e-29 131.7 115 62.6
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.0e-28 130.2 173 48.0
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 1.1e-27 126.7 115 59.1
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 2.5e-27 125.6 115 59.1
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 3.3e-27 125.2 101 65.3
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 4.3e-27 124.8 113 60.2
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 9.5e-27 123.6 115 58.3
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 6.1e-26 120.9 114 61.4
Oeu023150.1 Olea europaea HOM05D003628 ORTHO05D004253 1.3e-23 113.2 55 96.4
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.9e-23 112.1 87 67.8
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 3.7e-23 111.7 84 71.4
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 1.1e-22 110.2 89 67.4
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 1.4e-22 109.8 84 71.4
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 5.4e-22 107.8 101 60.4
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 4.6e-21 104.8 86 65.1
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 7.8e-21 104.0 87 64.4
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 1.7e-20 102.8 101 56.4
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 5.0e-20 101.3 87 66.7
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 6.6e-20 100.9 107 52.3
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 5.6e-19 97.8 117 49.6
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.6e-18 96.3 84 61.9
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 1.2e-16 90.1 114 49.1
PGSC0003DMG402011586 Solanum tuberosum HOM05D003628 ORTHO05D004253 1.4e-14 83.2 62 71.0
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 3.2e-14 82.0 113 46.9
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 4.1e-14 81.6 77 58.4
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 2.7e-13 79.0 112 43.8
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 1.3e-12 76.6 111 40.5
SHI00869 Sapria himalayana HOM05D003628 ORTHO05D004253 3.3e-11 72.0 78 51.3
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 6.8e-09 64.3 116 44.8
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 3.2e-06 55.5 107 37.4


User provided reference genes

Program Settings