Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 2.2e-134 482.3 232 100.0
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.1e-119 433.3 226 91.6
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 4.5e-108 394.8 225 82.7
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.0e-107 393.7 218 83.9
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 6.5e-107 391.0 221 82.8
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.2e-105 386.7 225 80.0
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 8.8e-104 380.6 223 78.5
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 7.5e-103 377.5 227 78.4
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.7e-102 376.3 219 79.9
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.7e-102 376.3 223 77.6
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.7e-102 376.3 225 78.2
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 4.8e-102 374.8 223 77.1
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 8.3e-102 374.0 217 78.3
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 8.3e-102 374.0 225 77.8
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.1e-101 373.6 226 75.7
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.4e-101 373.2 229 78.2
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.4e-101 373.2 224 78.6
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 2.4e-101 372.5 226 76.5
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 3.1e-101 372.1 223 76.7
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 5.4e-101 371.3 225 74.2
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.4e-101 371.3 224 78.1
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 5.4e-101 371.3 223 77.1
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 7.0e-101 370.9 225 78.2
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.6e-100 369.8 225 76.0
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.0e-100 369.4 225 76.0
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 4.5e-100 368.2 220 75.9
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 2.3e-99 365.9 226 75.7
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 3.8e-99 365.2 218 76.6
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 3.8e-99 365.2 226 74.3
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 5.0e-99 364.8 214 78.5
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 5.0e-99 364.8 218 73.9
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.5e-98 363.2 224 77.2
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 2.5e-98 362.5 223 75.3
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 3.2e-98 362.1 223 75.3
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 9.5e-98 360.5 220 75.5
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 2.1e-97 359.4 214 76.6
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.6e-97 358.6 220 75.0
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 3.6e-97 358.6 218 74.8
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 3.6e-97 358.6 220 74.5
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 3.6e-97 358.6 214 76.2
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.4e-96 356.7 219 74.0
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.4e-96 356.7 219 74.0
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 3.0e-96 355.5 226 74.8
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 3.0e-96 355.5 226 73.0
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 8.8e-96 354.0 224 74.6
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.5e-95 353.2 223 73.1
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 2.0e-95 352.8 219 74.4
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.0e-95 352.8 237 71.7
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.4e-95 352.1 247 68.8
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.4e-95 352.1 219 72.6
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 7.5e-95 350.9 226 70.4
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.7e-94 349.7 218 72.9
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 2.8e-94 349.0 214 73.8
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 2.8e-94 349.0 224 73.2
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 3.7e-94 348.6 220 72.3
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.7e-94 348.6 217 73.3
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 3.7e-94 348.6 226 71.7
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 6.3e-94 347.8 224 72.8
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 8.3e-94 347.4 220 71.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 1.4e-93 346.7 219 71.2
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.8e-93 346.3 226 71.2
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.4e-93 345.9 225 70.7
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 3.1e-93 345.5 209 73.7
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 4.1e-93 345.1 209 77.0
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 4.1e-93 345.1 223 70.0
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 5.4e-93 344.7 220 71.8
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 5.4e-93 344.7 220 71.8
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 5.4e-93 344.7 220 71.8
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 5.4e-93 344.7 220 71.8
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 7.0e-93 344.4 271 63.8
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 2.0e-92 342.8 201 78.1
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 3.5e-92 342.0 218 71.6
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 4.5e-92 341.7 225 69.3
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 5.9e-92 341.3 220 70.0
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.8e-92 340.9 215 71.6
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.3e-91 340.1 220 70.0
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.7e-91 339.7 225 69.8
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 2.3e-91 339.3 225 70.2
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.3e-91 339.3 217 71.4
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 2.3e-91 339.3 313 56.2
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 2.9e-91 339.0 215 71.2
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 2.9e-91 339.0 224 68.3
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 5.0e-91 338.2 220 70.5
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 5.0e-91 338.2 220 70.5
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.5e-90 336.7 223 70.0
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 5.6e-90 334.7 220 70.5
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 7.3e-90 334.3 225 69.3
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 3.6e-89 332.0 225 68.4
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 3.6e-89 332.0 225 68.4
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 3.6e-89 332.0 220 68.2
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 4.7e-89 331.6 223 66.8
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 6.1e-89 331.3 224 67.0
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 8.0e-89 330.9 223 68.2
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 1.8e-88 329.7 223 67.3
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 1.5e-87 326.6 214 67.8
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 4.1e-85 318.5 214 69.6
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 5.0e-83 311.6 223 62.8
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 1.4e-80 303.5 196 71.9
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 2.2e-78 296.2 206 67.0
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.1e-77 293.9 164 82.3
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 2.4e-77 292.7 172 78.5
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 6.2e-73 278.1 165 77.0
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.4e-71 272.3 215 59.5
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.2e-69 265.8 217 59.0
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.3e-67 259.6 222 56.8
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.0e-63 246.5 214 55.1
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 4.9e-54 215.3 140 70.0
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 1.5e-50 203.8 167 59.9
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 1.3e-46 190.7 225 47.1
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 3.5e-44 182.6 101 79.2
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 7.9e-44 181.4 210 49.5
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 3.7e-41 172.6 128 63.3
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.8e-40 170.2 217 42.9
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 8.7e-35 151.4 106 67.0
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.1e-34 151.0 212 40.6
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.3e-33 147.5 94 75.5
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.8e-33 146.4 93 75.3
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.8e-33 146.4 91 76.9
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.8e-33 146.4 91 76.9
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 8.4e-30 134.8 106 60.4
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.3e-26 122.9 94 66.0
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 4.3e-26 122.5 121 52.9
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 4.3e-26 122.5 121 52.9
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.7e-25 119.4 94 63.8
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 4.5e-23 112.5 190 38.4
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 4.2e-21 105.9 62 75.8
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 9.4e-21 104.8 80 65.0
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 6.1e-20 102.1 68 72.1
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.4e-16 90.9 54 70.4
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.4e-16 90.9 171 32.7
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 2.0e-15 87.0 186 33.3
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.7e-14 84.0 62 67.7
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 3.3e-10 69.7 50 74.0


User provided reference genes

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