Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023128.1 Olea europaea HOM05D000083 ORTHO05D003582 7.5e-127 457.2 233 100.0
Oeu057598.1 Olea europaea HOM05D000083 ORTHO05D003582 2.1e-105 386.0 233 87.1
Oeu007541.1 Olea europaea HOM05D000083 ORTHO05D003582 2.9e-102 375.6 232 84.1
Oeu023129.1 Olea europaea HOM05D000083 ORTHO05D003582 1.5e-87 326.6 188 91.0
Migut.E00701 Erythranthe guttata HOM05D000083 ORTHO05D003582 6.2e-65 251.5 220 64.5
SalBow6G1016 Salvia bowleyana HOM05D000083 ORTHO05D003582 8.4e-62 241.1 208 65.4
MSTRG.2058 Avicennia marina HOM05D000083 ORTHO05D003582 6.0e-60 235.0 208 63.9
Cc00_g03930 Coffea canephora HOM05D000083 ORTHO05D003582 1.3e-59 233.8 220 60.5
DCAR_030398 Daucus carota HOM05D000083 ORTHO05D003582 5.1e-59 231.9 209 61.7
Prupe.1G346000 Prunus persica HOM05D000083 ORTHO05D003582 5.6e-58 228.4 220 58.6
HanXRQChr17g0540841 Helianthus annuus HOM05D000083 ORTHO05D003582 2.1e-57 226.5 208 61.1
MD16G1000900 Malus domestica HOM05D000083 ORTHO05D003582 2.8e-57 226.1 220 57.7
HanXRQChr06g0172001 Helianthus annuus HOM05D000083 ORTHO05D003582 3.7e-57 225.7 208 60.6
Oeu033540.1 Olea europaea HOM05D000083 ORTHO05D003582 1.4e-56 223.8 220 58.6
RcHm_v2.0_Chr4g0446521 Rosa chinensis HOM05D000083 ORTHO05D003582 1.8e-56 223.4 220 56.8
vmacro10904 Vaccinium macrocarpon HOM05D000083 ORTHO05D003582 1.8e-56 223.4 208 59.6
MD13G1006900 Malus domestica HOM05D000083 ORTHO05D003582 2.4e-56 223.0 220 57.3
Lj3C850G18 Lonicera japonica HOM05D000083 ORTHO05D003582 3.1e-56 222.6 208 59.6
FAN07G1039 Fragaria x ananassa HOM05D000083 ORTHO05D003582 5.3e-56 221.9 220 57.3
Rhsim09G0073200 Rhododendron simsii HOM05D000083 ORTHO05D003582 6.9e-56 221.5 208 59.1
FvH4_4g36790 Fragaria vesca HOM05D000083 ORTHO05D003582 1.2e-55 220.7 220 57.7
Nn7g37822 Nelumbo nucifera HOM05D000083 ORTHO05D003582 2.0e-55 219.9 220 58.2
Lj3g0012190 Lotus japonicus HOM05D000083 ORTHO05D003582 2.6e-55 219.5 220 56.8
GSVIVG01012031001 Vitis vinifera HOM05D000083 ORTHO05D003582 3.4e-55 219.2 208 59.6
Dinv11712 Davidia involucrata HOM05D000083 ORTHO05D003582 4.5e-55 218.8 208 59.1
Oeu027907.6 Olea europaea HOM05D000083 ORTHO05D003582 7.6e-55 218.0 220 59.1
Manes.11G101900 Manihot esculenta HOM05D000083 ORTHO05D003582 9.9e-55 217.6 220 57.3
Phvul.011G030800 Phaseolus vulgaris HOM05D000083 ORTHO05D003582 1.3e-54 217.2 220 56.4
Psat7g176440 Pisum sativum HOM05D000083 ORTHO05D003582 1.7e-54 216.9 220 55.9
SGA_v2.0_scaffold99G29461 Striga asiatica HOM05D000083 ORTHO05D003582 2.2e-54 216.5 249 53.4
Glyma.12G027600 Glycine max HOM05D000083 ORTHO05D003582 3.8e-54 215.7 220 56.4
Ca_19030_v3 Cicer arietinum L. HOM05D000083 ORTHO05D003582 4.9e-54 215.3 220 55.0
FAN17G2779 Fragaria x ananassa HOM05D000083 ORTHO05D003582 4.9e-54 215.3 229 55.5
Glyma.11G101700 Glycine max HOM05D000083 ORTHO05D003582 4.9e-54 215.3 220 55.9
CANSAT64G2172 Cannabis sativa HOM05D000083 ORTHO05D003582 6.4e-54 214.9 220 56.8
Ciclev10030510m.g Citrus clementina HOM05D000083 ORTHO05D003582 6.4e-54 214.9 208 58.2
VMungo1383G1323 Vigna mungo HOM05D000083 ORTHO05D003582 6.4e-54 214.9 220 55.5
CiPaw.04G139600 Carya illinoinensis HOM05D000083 ORTHO05D003582 8.4e-54 214.5 220 56.4
TAR629G3380 Trochodendron aralioides HOM05D000083 ORTHO05D003582 8.4e-54 214.5 208 58.2
Gohir.D12G137900 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.4e-53 213.8 220 55.9
THA.LOC104822679 Tarenaya hassleriana HOM05D000083 ORTHO05D003582 1.4e-53 213.8 220 55.9
AL3G25440 Arabidopsis lyrata HOM05D000083 ORTHO05D003582 1.9e-53 213.4 220 55.0
Medtr4g074875 Medicago truncatula HOM05D000083 ORTHO05D003582 1.9e-53 213.4 208 56.7
QL03p043964 Quercus lobata HOM05D000083 ORTHO05D003582 1.9e-53 213.4 220 56.4
Carub.0003s1301 Capsella rubella HOM05D000083 ORTHO05D003582 2.4e-53 213.0 220 55.0
FAN12G3263 Fragaria x ananassa HOM05D000083 ORTHO05D003582 2.4e-53 213.0 229 55.5
Medtr4g075410 Medicago truncatula HOM05D000083 ORTHO05D003582 2.4e-53 213.0 220 54.5
Aqoxy7G03614 Aquilegia oxysepala HOM05D000083 ORTHO05D003582 3.2e-53 212.6 220 55.9
CARHR088200 Cardamine hirsuta HOM05D000083 ORTHO05D003582 3.2e-53 212.6 220 55.0
AUR62017682 Chenopodium quinoa HOM05D000083 ORTHO05D003582 3.2e-53 212.6 208 59.6
TAR371G0617 Trochodendron aralioides HOM05D000083 ORTHO05D003582 3.2e-53 212.6 220 56.4
AUR62015218 Chenopodium quinoa HOM05D000083 ORTHO05D003582 4.2e-53 212.2 208 59.6
Gohir.A03G164300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 5.5e-53 211.8 208 57.7
AT3G13530 Arabidopsis thaliana HOM05D000083 ORTHO05D003582 7.1e-53 211.5 220 54.5
TPR.G32329 Trifolium pratense HOM05D000083 ORTHO05D003582 7.1e-53 211.5 220 54.5
Thhalv10019926m.g Eutrema salsugineum HOM05D000083 ORTHO05D003582 9.3e-53 211.1 220 55.0
Thecc.02G160900 Theobroma cacao HOM05D000083 ORTHO05D003582 9.3e-53 211.1 208 57.7
Duzib132G0002 Durio zibethinus HOM05D000083 ORTHO05D003582 1.2e-52 210.7 208 57.7
Duzib248G1611 Durio zibethinus HOM05D000083 ORTHO05D003582 2.1e-52 209.9 208 57.7
Gorai.008G149400 Gossypium raimondii HOM05D000083 ORTHO05D003582 2.1e-52 209.9 220 55.0
Lalb_Chr19g0139361 Lupinus albus HOM05D000083 ORTHO05D003582 2.1e-52 209.9 208 57.2
Thhalv10019902m.g Eutrema salsugineum HOM05D000083 ORTHO05D003582 2.7e-52 209.5 220 54.5
Gohir.A12G134300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 2.7e-52 209.5 220 55.0
TWI53G2094 Tripterygium wilfordii HOM05D000083 ORTHO05D003582 2.7e-52 209.5 208 56.2
Peaxi162Scf00363g00731 Petunia axillaris HOM05D000083 ORTHO05D003582 3.5e-52 209.1 208 56.7
Sc06g0007920 Simmondsia chinensis HOM05D000083 ORTHO05D003582 4.6e-52 208.8 208 57.7
Gohir.D02G187600 Gossypium hirsutum HOM05D000083 ORTHO05D003582 6.0e-52 208.4 208 56.7
Potri.005G094200 Populus trichocarpa HOM05D000083 ORTHO05D003582 6.0e-52 208.4 208 57.2
BolC3t16908H Brassica oleracea HOM05D000083 ORTHO05D003582 7.9e-52 208.0 220 54.1
Gorai.005G210100 Gossypium raimondii HOM05D000083 ORTHO05D003582 7.9e-52 208.0 208 56.7
BcaB04g18769 Brassica carinata HOM05D000083 ORTHO05D003582 1.3e-51 207.2 220 55.0
CsaV3_3G031470 Cucumis sativus L. HOM05D000083 ORTHO05D003582 1.3e-51 207.2 208 56.7
MELO3C024030.2 Cucumis melo HOM05D000083 ORTHO05D003582 1.8e-51 206.8 208 56.7
THA.LOC104810328 Tarenaya hassleriana HOM05D000083 ORTHO05D003582 1.8e-51 206.8 220 54.5
Sed0020503 Sechium edule HOM05D000083 ORTHO05D003582 2.3e-51 206.5 208 55.8
C03p46440 Brassica napus HOM05D000083 ORTHO05D003582 3.0e-51 206.1 220 53.6
Sabra05G0078000 Salix brachista HOM05D000083 ORTHO05D003582 3.0e-51 206.1 208 57.2
PSO063G5474 Papaver somniferum HOM05D000083 ORTHO05D003582 3.9e-51 205.7 210 58.6
PSO782G1916 Papaver somniferum HOM05D000083 ORTHO05D003582 3.9e-51 205.7 210 58.6
Haze_11721 Corylus avellana HOM05D000083 ORTHO05D003582 5.1e-51 205.3 239 52.7
Aa31LG8G730 Aethionema arabicum HOM05D000083 ORTHO05D003582 6.7e-51 204.9 221 53.4
CAN.G624.28 Capsicum annuum HOM05D000083 ORTHO05D003582 6.7e-51 204.9 220 55.0
Peaxi162Scf01172g00034 Petunia axillaris HOM05D000083 ORTHO05D003582 8.7e-51 204.5 220 55.0
PGSC0003DMG400007647 Solanum tuberosum HOM05D000083 ORTHO05D003582 1.1e-50 204.1 220 54.5
Aa31LG10G1090 Aethionema arabicum HOM05D000083 ORTHO05D003582 1.9e-50 203.4 220 54.5
DCAR_023443 Daucus carota HOM05D000083 ORTHO05D003582 1.9e-50 203.4 208 53.4
TWI74G1512 Tripterygium wilfordii HOM05D000083 ORTHO05D003582 1.9e-50 203.4 208 55.8
AT3G07980 Arabidopsis thaliana HOM05D000083 ORTHO05D003582 2.5e-50 203.0 208 55.3
DCAR_004230 Daucus carota HOM05D000083 ORTHO05D003582 2.5e-50 203.0 220 54.1
Carub.0003s0756 Capsella rubella HOM05D000083 ORTHO05D003582 3.3e-50 202.6 208 54.8
Solyc11g033270.2 Solanum lycopersicum HOM05D000083 ORTHO05D003582 3.3e-50 202.6 220 54.5
Eucgr.J00858 Eucalyptus grandis HOM05D000083 ORTHO05D003582 7.4e-50 201.4 208 55.8
Sp3g06890 Schrenkiella parvula HOM05D000083 ORTHO05D003582 7.4e-50 201.4 220 52.7
ATR0326G043 Amborella trichopoda HOM05D000083 ORTHO05D003582 9.6e-50 201.1 212 57.5
ECA246G2960 Erigeron canadensis HOM05D000083 ORTHO05D003582 9.6e-50 201.1 208 56.7
PGR044G0594 Punica granatum HOM05D000083 ORTHO05D003582 1.3e-49 200.7 208 54.3
Gohir.A01G013000 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.6e-49 200.3 208 56.7
Sopen11g015750 Solanum pennellii HOM05D000083 ORTHO05D003582 1.6e-49 200.3 220 54.1
Ah.01g012890 Amaranthus hybridus HOM05D000083 ORTHO05D003582 2.1e-49 199.9 208 55.8
Gohir.D01G014300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 2.8e-49 199.5 208 56.7
Lsat_1_v5_gn_3_33541 Lactuca sativa HOM05D000083 ORTHO05D003582 1.8e-48 196.8 162 66.0
Potri.007G070100 Populus trichocarpa HOM05D000083 ORTHO05D003582 2.4e-48 196.4 208 56.2
Gorai.002G016000 Gossypium raimondii HOM05D000083 ORTHO05D003582 3.1e-48 196.1 208 56.2
arahy.Tifrunner.gnm1.ann1.ZIJB47 Arachis hypogaea HOM05D000083 ORTHO05D003582 2.0e-47 193.4 220 50.9
Sp3g11740 Schrenkiella parvula HOM05D000083 ORTHO05D003582 3.4e-47 192.6 220 50.9
arahy.Tifrunner.gnm1.ann1.FSDW2L Arachis hypogaea HOM05D000083 ORTHO05D003582 4.5e-47 192.2 220 50.9
ClCG10G011890 Citrullus lanatus HOM05D000083 ORTHO05D003582 1.7e-46 190.3 245 48.2
HPP92_002088 Vanilla planifolia HOM05D000083 ORTHO05D003582 2.9e-46 189.5 212 54.7
EL10Ac9g22930 Beta vulgaris HOM05D000083 ORTHO05D003582 6.5e-46 188.3 208 53.8
AL3G19360 Arabidopsis lyrata HOM05D000083 ORTHO05D003582 1.9e-45 186.8 208 52.9
A03p38250 Brassica napus HOM05D000083 ORTHO05D003582 3.2e-45 186.0 219 50.2
BraA03t12978Z Brassica rapa HOM05D000083 ORTHO05D003582 4.2e-45 185.7 219 49.8
Os04g0660500 Oryza sativa ssp. japonica HOM05D000083 ORTHO05D003582 4.2e-45 185.7 211 55.0
BcaC01g03989 Brassica carinata HOM05D000083 ORTHO05D003582 7.1e-45 184.9 219 49.3
CDE04G1078 Ceratophyllum demersum HOM05D000083 ORTHO05D003582 3.5e-44 182.6 208 51.9
unitig_22.g5627 Utricularia gibba HOM05D000083 ORTHO05D003582 4.6e-44 182.2 205 52.2
Sabra07G0058700 Salix brachista HOM05D000083 ORTHO05D003582 6.0e-44 181.8 208 52.4
Lalb_Chr03g0024821 Lupinus albus HOM05D000083 ORTHO05D003582 1.3e-43 180.6 221 50.7
Ah.01g001600 Amaranthus hybridus HOM05D000083 ORTHO05D003582 1.8e-43 180.3 224 50.0
CARHR082720 Cardamine hirsuta HOM05D000083 ORTHO05D003582 3.9e-43 179.1 210 51.0
Zm00001eb067530 Zea mays HOM05D000083 ORTHO05D003582 5.1e-43 178.7 209 51.7
SHI17990 Sapria himalayana HOM05D000083 ORTHO05D003582 6.7e-43 178.3 210 50.5
Hund24289 Selenicereus undatus HOM05D000083 ORTHO05D003582 8.7e-43 177.9 208 52.4
Zm00001eb432730 Zea mays HOM05D000083 ORTHO05D003582 1.1e-42 177.6 209 52.2
Lalb_Chr10g0095051 Lupinus albus HOM05D000083 ORTHO05D003582 4.3e-42 175.6 220 48.2
BcaB03g11558 Brassica carinata HOM05D000083 ORTHO05D003582 9.7e-42 174.5 168 57.7
A03p35590 Brassica napus HOM05D000083 ORTHO05D003582 2.2e-41 173.3 168 57.7
C03p43230 Brassica napus HOM05D000083 ORTHO05D003582 2.8e-41 172.9 157 59.9
Cpa.g.sc119.48 Carica papaya HOM05D000083 ORTHO05D003582 2.8e-41 172.9 180 54.4
BolC3t16592H Brassica oleracea HOM05D000083 ORTHO05D003582 1.8e-40 170.2 157 59.2
BraA03t12735Z Brassica rapa HOM05D000083 ORTHO05D003582 1.8e-40 170.2 168 57.1
Atru.chr11.1178 Acer truncatum HOM05D000083 ORTHO05D003582 3.1e-40 169.5 172 55.2
Oeu042808.3 Olea europaea HOM05D000083 ORTHO05D290297 6.1e-36 155.2 155 61.3
A01p40080 Brassica napus HOM05D000083 ORTHO05D003582 7.9e-36 154.8 156 58.3
BcaB03g11559 Brassica carinata HOM05D000083 ORTHO05D003582 1.3e-35 154.1 209 45.0
HPP92_002093 Vanilla planifolia HOM05D000083 ORTHO05D003582 2.3e-35 153.3 212 47.6
BcaB04g20987 Brassica carinata HOM05D000083 ORTHO05D003582 3.0e-35 152.9 157 58.0
C01p51560 Brassica napus HOM05D000083 ORTHO05D003582 3.0e-35 152.9 157 58.0
BolC1t05099H Brassica oleracea HOM05D000083 ORTHO05D003582 3.0e-35 152.9 157 58.0
BraA01t04049Z Brassica rapa HOM05D000083 ORTHO05D003582 3.0e-35 152.9 156 57.1
SEGI_08600 Sequoiadendron giganteum HOM05D000083 ORTHO05D003582 2.8e-33 146.4 181 51.4
Sabra07G0058200 Salix brachista HOM05D000083 ORTHO05D003582 6.3e-33 145.2 219 43.8
BcaB03g11561 Brassica carinata HOM05D000083 ORTHO05D003582 4.1e-32 142.5 153 49.0
SEGI_09729 Sequoiadendron giganteum HOM05D000083 ORTHO05D003582 9.1e-32 141.4 213 44.6
DCAR_026911 Daucus carota HOM05D000083 ORTHO05D003582 2.6e-31 139.8 184 47.3
SMO198G0032 Selaginella moellendorffii HOM05D000083 ORTHO05D003582 5.0e-30 135.6 167 50.9
Mapoly0140s0044 Marchantia polymorpha HOM05D000083 ORTHO05D003582 3.9e-27 125.9 181 45.3
Pp3c15_11760 Physcomitrium patens HOM05D000083 ORTHO05D003582 5.1e-27 125.6 209 42.6
Nitab4.5_0002113g0210 Nicotiana tabacum HOM05D000083 ORTHO05D003582 2.8e-25 119.8 220 40.0
HPP92_002069 Vanilla planifolia HOM05D000083 ORTHO05D003582 1.9e-21 107.1 180 42.2
Pp3c15_25040 Physcomitrium patens HOM05D000083 ORTHO05D003582 8.0e-20 101.7 153 41.2
Pp3c9_25590 Physcomitrium patens HOM05D000083 ORTHO05D003582 8.0e-20 101.7 200 37.5
Hma1.2p1_0005F.1_g004230 Hydrangea macrophylla HOM05D000083 ORTHO05D003582 3.0e-19 99.8 164 43.3
BcaB03g11553 Brassica carinata HOM05D000083 ORTHO05D003582 1.1e-18 97.8 168 41.7
CBR_g38927 Chara braunii HOM05D000083 ORTHO05D003582 3.3e-18 96.3 142 40.8
CBR_g66805 Chara braunii HOM05D000083 ORTHO05D003582 1.8e-16 90.5 142 38.0
AagrBONN_evm.TU.Sc2ySwM_344.4764 Anthoceros agrestis HOM05D000083 ORTHO05D003582 4.1e-16 89.4 101 48.5
PRCOL_00002034 Prasinoderma coloniale HOM05D000083 ORTHO05D003582 2.5e-13 80.1 120 39.2
A05p35920 Brassica napus HOM05D000083 ORTHO05D003582 7.7e-07 58.5 59 57.6
BraA05t22398Z Brassica rapa HOM05D000083 ORTHO05D003582 7.7e-07 58.5 59 57.6


User provided reference genes

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