Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 4.2e-65 251.5 157 100.0
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 1.6e-27 126.7 155 67.1
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 1.0e-26 124.0 150 63.3
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 6.5e-26 121.3 152 65.1
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 8.5e-26 120.9 152 62.5
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 4.7e-24 115.2 153 58.2
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 6.1e-24 114.8 152 55.9
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 6.1e-24 114.8 152 51.3
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 1.8e-23 113.2 152 62.5
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 2.3e-23 112.8 153 56.9
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 6.8e-23 111.3 153 56.9
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 1.2e-22 110.5 152 45.4
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 4.4e-22 108.6 153 62.1
CAN.G959.26 Capsicum annuum HOM05D005060 ORTHO05D005975 5.7e-22 108.2 152 60.5
Sopen10g028770 Solanum pennellii HOM05D005060 ORTHO05D005975 5.4e-20 101.7 152 59.9
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 9.1e-20 100.9 160 62.5
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 4.5e-19 98.6 151 49.0
Solyc10g077090.2 Solanum lycopersicum HOM05D005060 ORTHO05D005975 1.7e-18 96.7 152 59.2
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 5.0e-18 95.1 150 56.7
PGSC0003DMG400007184 Solanum tuberosum HOM05D005060 ORTHO05D005975 1.5e-17 93.6 119 65.5
Nitab4.5_0001270g0130 Nicotiana tabacum HOM05D005060 ORTHO05D005975 5.5e-17 91.7 117 66.7
Aqoxy1G00045 Aquilegia oxysepala HOM05D005060 ORTHO05D005975 7.2e-17 91.3 158 56.3
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 1.2e-16 90.5 155 51.0
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 4.7e-16 88.6 144 52.8
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 1.0e-15 87.4 127 64.6
Actinidia24546 Actinidia chinensis HOM05D005060 ORTHO05D005975 1.4e-15 87.0 99 74.7
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 1.4e-15 87.0 153 43.1
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 4.0e-15 85.5 106 67.9
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 5.2e-15 85.1 139 61.9
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 5.2e-15 85.1 139 61.9
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 6.8e-15 84.7 157 38.2
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 8.9e-15 84.3 153 53.6
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 8.9e-15 84.3 162 39.5
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 1.2e-14 84.0 96 72.9
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 2.0e-14 83.2 133 46.6
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 2.6e-14 82.8 112 50.9
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 5.7e-14 81.6 152 55.3
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 9.8e-14 80.9 104 56.7
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 9.8e-14 80.9 139 50.4
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 1.7e-13 80.1 169 53.8
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 6.3e-13 78.2 154 37.0
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 2.4e-12 76.3 135 51.9
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 5.4e-12 75.1 158 50.6
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 7.0e-12 74.7 152 34.2
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.2e-11 73.9 111 45.0
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 1.6e-11 73.6 162 45.7
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 1.6e-11 73.6 133 54.1
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.0e-11 73.2 145 42.8
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 1.3e-10 70.5 127 38.6
Ciclev10013042m.g Citrus clementina HOM05D005060 ORTHO05D005975 1.7e-10 70.1 157 52.9
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 2.3e-10 69.7 143 54.5
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 2.3e-10 69.7 153 42.5
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 2.9e-10 69.3 111 47.7
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 2.9e-10 69.3 156 41.7
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 2.9e-10 69.3 158 37.3
Dinv10816 Davidia involucrata HOM05D005060 ORTHO05D005975 6.6e-10 68.2 81 55.6
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 1.1e-09 67.4 159 37.7
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 1.9e-09 66.6 152 40.8
CDE02G1443 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 2.5e-09 66.2 138 54.3
CDE04G0407 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 2.5e-09 66.2 145 52.4
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 2.5e-09 66.2 111 52.3
TWI74G0567 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 4.3e-09 65.5 159 48.4
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 5.6e-09 65.1 143 46.9
SalBow6G5728 Salvia bowleyana HOM05D005060 ORTHO05D005975 5.6e-09 65.1 150 52.0
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 7.3e-09 64.7 158 41.1
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 7.3e-09 64.7 158 41.1
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 7.3e-09 64.7 91 51.6
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 9.5e-09 64.3 152 46.7
CiPaw.10G123900 Carya illinoinensis HOM05D005060 ORTHO05D005975 2.1e-08 63.2 96 61.5
Hund24512 Selenicereus undatus HOM05D005060 ORTHO05D005975 2.1e-08 63.2 152 49.3
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 2.8e-08 62.8 132 43.9
ATR0787G086 Amborella trichopoda HOM05D005060 ORTHO05D005975 4.7e-08 62.0 155 50.3
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 4.7e-08 62.0 158 40.5
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 6.1e-08 61.6 159 35.2
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 6.1e-08 61.6 153 40.5
SGA_v2.0_scaffold104G30067 Striga asiatica HOM05D005060 ORTHO05D005975 1.0e-07 60.8 82 46.3
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 1.4e-07 60.5 155 34.8
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.4e-07 60.5 152 33.6
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.3e-07 59.7 152 40.8
CANSAT78G0005 Cannabis sativa HOM05D005060 ORTHO05D005975 4.0e-07 58.9 156 44.9
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 4.0e-07 58.9 152 39.5
Ah.13g077380 Amaranthus hybridus HOM05D005060 ORTHO05D005975 5.2e-07 58.5 153 41.8
AUR62020993 Chenopodium quinoa HOM05D005060 ORTHO05D005975 6.8e-07 58.2 116 51.7
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 6.8e-07 58.2 154 39.6
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 1.2e-06 57.4 152 37.5
A09p49780 Brassica napus HOM05D005060 ORTHO05D005975 1.5e-06 57.0 155 39.4
BraA09t40431Z Brassica rapa HOM05D005060 ORTHO05D005975 1.5e-06 57.0 155 39.4
Atru.chr1.1518 Acer truncatum HOM05D005060 ORTHO05D005975 2.0e-06 56.6 145 53.1
Duzib128G1851 Durio zibethinus HOM05D005060 ORTHO05D005975 2.0e-06 56.6 154 48.7
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 2.0e-06 56.6 156 41.7
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 2.6e-06 56.2 156 38.5
EL10Ac3g07347 Beta vulgaris HOM05D005060 ORTHO05D005975 2.6e-06 56.2 111 44.1
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 2.6e-06 56.2 152 38.8
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 2.6e-06 56.2 161 39.8
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 3.4e-06 55.8 140 39.3
Peaxi162Scf00003g00535 Petunia axillaris HOM05D005060 ORTHO05D049430 3.4e-06 55.8 66 50.0
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 3.4e-06 55.8 158 41.8
HPP92_011298 Vanilla planifolia HOM05D065872 ORTHO05D005975 3.4e-06 55.8 93 63.4
HPP92_011277 Vanilla planifolia HOM05D065872 ORTHO05D005975 4.4e-06 55.5 93 63.4
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 7.5e-06 54.7 156 35.3
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 9.8e-06 54.3 152 40.8
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 9.8e-06 54.3 152 40.8
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 9.8e-06 54.3 157 39.5


User provided reference genes

Program Settings