Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022968.1 Olea europaea HOM05D004518 ORTHO05D005434 1.5e-161 572.8 292 100.0
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 2.9e-128 462.2 351 69.5
Dinv05720 Davidia involucrata HOM05D004518 ORTHO05D005434 1.6e-123 446.4 294 76.5
Cc06_g19630 Coffea canephora HOM05D004518 ORTHO05D005434 1.1e-122 443.7 292 74.7
Dinv03206 Davidia involucrata HOM05D004518 ORTHO05D005434 1.1e-122 443.7 294 76.5
Migut.J01644 Erythranthe guttata HOM05D004518 ORTHO05D005434 2.4e-122 442.6 294 76.9
CSS0002759 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 3.8e-120 435.3 295 73.9
CSS0023469 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 3.8e-120 435.3 295 73.9
GSVIVG01025741001 Vitis vinifera HOM05D004518 ORTHO05D005434 6.5e-120 434.5 295 72.5
Atru.chr1.1396 Acer truncatum HOM05D004518 ORTHO05D005434 2.1e-118 429.5 294 73.8
Actinidia06430 Actinidia chinensis HOM05D004518 ORTHO05D005434 3.6e-118 428.7 295 73.2
Cfa019996 Carpinus fangiana HOM05D004518 ORTHO05D005434 6.7e-117 424.5 294 72.8
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla HOM05D004518 ORTHO05D005434 8.8e-117 424.1 295 71.9
Thecc.05G127700 Theobroma cacao HOM05D004518 ORTHO05D005434 8.8e-117 424.1 295 72.2
COL.COLO4_07077 Corchorus olitorius HOM05D004518 ORTHO05D005434 4.3e-116 421.8 294 73.1
SGA_v2.0_scaffold69G23161 Striga asiatica HOM05D004518 ORTHO05D005434 2.2e-115 419.5 294 74.5
Sopen10g031320 Solanum pennellii HOM05D004518 ORTHO05D005434 2.8e-115 419.1 295 70.5
PGSC0003DMG400023695 Solanum tuberosum HOM05D004518 ORTHO05D005434 4.8e-115 418.3 295 70.5
Gohir.D13G001500 Gossypium hirsutum HOM05D004518 ORTHO05D005434 6.3e-115 417.9 295 71.5
Gorai.013G001400 Gossypium raimondii HOM05D004518 ORTHO05D005434 6.3e-115 417.9 295 71.5
TWI53G0703 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 8.2e-115 417.5 293 73.7
Duzib106G1523 Durio zibethinus HOM05D004518 ORTHO05D005434 4.1e-114 415.2 295 71.2
Peaxi162Scf00696g00027 Petunia axillaris HOM05D004518 ORTHO05D005434 5.3e-114 414.8 298 69.8
CiPaw.10G040700 Carya illinoinensis HOM05D004518 ORTHO05D005434 1.2e-113 413.7 294 70.7
MSTRG.19796 Avicennia marina HOM05D004518 ORTHO05D005434 1.3e-112 410.2 294 73.1
Potri.006G040100 Populus trichocarpa HOM05D004518 ORTHO05D005434 5.0e-112 408.3 295 70.5
PGR031G0872 Punica granatum HOM05D004518 ORTHO05D005434 5.0e-112 408.3 294 68.0
Rhsim07G0181600 Rhododendron simsii HOM05D004518 ORTHO05D005434 5.0e-112 408.3 317 66.9
Solyc10g080810.2 Solanum lycopersicum HOM05D004518 ORTHO05D005434 6.5e-112 407.9 295 68.8
TWI74G1405 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.1e-111 407.1 292 72.9
Glyma.19G129500 Glycine max HOM05D004518 ORTHO05D005434 5.5e-111 404.8 294 68.4
Manes.09G003700 Manihot esculenta HOM05D004518 ORTHO05D005434 7.2e-111 404.4 292 71.9
PSO339G3176 Papaver somniferum HOM05D004518 ORTHO05D005434 9.4e-111 404.1 295 70.8
AT3G56740 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 1.2e-110 403.7 294 69.0
Medtr7g089550 Medicago truncatula HOM05D004518 ORTHO05D005434 1.2e-110 403.7 294 68.7
Carub.0005s2348 Capsella rubella HOM05D004518 ORTHO05D005434 1.6e-110 403.3 294 68.7
BcaC07g40121 Brassica carinata HOM05D004518 ORTHO05D005434 2.7e-110 402.5 294 68.7
Nitab4.5_0001173g0020 Nicotiana tabacum HOM05D004518 ORTHO05D005434 3.6e-110 402.1 293 69.3
CiPaw.09G048700 Carya illinoinensis HOM05D004518 ORTHO05D005434 6.1e-110 401.4 294 67.7
Lsat_1_v5_gn_9_30021 Lactuca sativa HOM05D004518 ORTHO05D005434 6.1e-110 401.4 291 71.1
Glyma.03G126400 Glycine max HOM05D004518 ORTHO05D005434 7.9e-110 401.0 294 68.0
MELO3C026597.2 Cucumis melo HOM05D004518 ORTHO05D005434 1.0e-109 400.6 294 69.4
Thhalv10006131m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 1.0e-109 400.6 294 69.0
RcHm_v2.0_Chr2g0125741 Rosa chinensis HOM05D004518 ORTHO05D005434 1.0e-109 400.6 294 69.4
ECA247G2040 Erigeron canadensis HOM05D004518 ORTHO05D005434 1.4e-109 400.2 294 69.7
SGA_v2.0_scaffold66G22264 Striga asiatica HOM05D004518 ORTHO05D005434 1.4e-109 400.2 283 73.9
HanXRQChr10g0292841 Helianthus annuus HOM05D004518 ORTHO05D005434 1.8e-109 399.8 295 70.2
AL5G38100 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 2.3e-109 399.4 294 68.4
Lj1g0025115 Lotus japonicus HOM05D004518 ORTHO05D005434 2.3e-109 399.4 294 68.0
Aa31LG10G11580 Aethionema arabicum HOM05D004518 ORTHO05D005434 3.9e-109 398.7 292 68.2
Sp5g05830 Schrenkiella parvula HOM05D004518 ORTHO05D005434 3.9e-109 398.7 294 68.4
ClCG10G013700 Citrullus lanatus HOM05D004518 ORTHO05D005434 5.2e-109 398.3 294 68.7
Lalb_Chr14g0365751 Lupinus albus HOM05D004518 ORTHO05D005434 5.2e-109 398.3 294 68.0
Phvul.001G121800 Phaseolus vulgaris HOM05D004518 ORTHO05D005434 6.7e-109 397.9 296 66.9
CANSAT64G1638 Cannabis sativa HOM05D004518 ORTHO05D005434 8.8e-109 397.5 294 70.1
MD14G1089500 Malus domestica HOM05D004518 ORTHO05D005434 8.8e-109 397.5 294 67.3
PSO384G3583 Papaver somniferum HOM05D004518 ORTHO05D005434 8.8e-109 397.5 295 70.5
Prupe.7G034400 Prunus persica HOM05D004518 ORTHO05D005434 8.8e-109 397.5 294 68.4
BcaC07g39982 Brassica carinata HOM05D004518 ORTHO05D005434 1.1e-108 397.1 294 69.0
CARHR166870 Cardamine hirsuta HOM05D004518 ORTHO05D005434 1.1e-108 397.1 294 67.7
Sed0000448 Sechium edule HOM05D004518 ORTHO05D005434 1.1e-108 397.1 294 66.7
THA.LOC104803258 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 1.1e-108 397.1 296 67.9
MBI19_g14619_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 2.0e-108 396.4 321 64.2
MD12G1096200 Malus domestica HOM05D004518 ORTHO05D005434 2.0e-108 396.4 293 70.0
TAR623G1611 Trochodendron aralioides HOM05D004518 ORTHO05D005434 2.0e-108 396.4 292 68.2
A09p49580 Brassica napus HOM05D004518 ORTHO05D005434 3.3e-108 395.6 306 67.3
BraA09t40411Z Brassica rapa HOM05D004518 ORTHO05D005434 3.3e-108 395.6 306 67.3
VMungo1383G1992 Vigna mungo HOM05D004518 ORTHO05D005434 5.7e-108 394.8 297 67.0
CsaV3_3G042950 Cucumis sativus L. HOM05D004518 ORTHO05D005434 1.3e-107 393.7 294 68.4
unitig_744.g24180 Utricularia gibba HOM05D004518 ORTHO05D005434 2.2e-107 392.9 296 68.6
TWI77G0289 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 2.8e-107 392.5 293 69.6
FAN05G1433 Fragaria x ananassa HOM05D004518 ORTHO05D005434 3.7e-107 392.1 294 68.0
BolC8t50814H Brassica oleracea HOM05D004518 ORTHO05D005434 1.8e-106 389.8 306 66.7
THA.LOC104824396 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 1.8e-106 389.8 297 67.0
EL10Ac3g07249 Beta vulgaris HOM05D004518 ORTHO05D005434 3.1e-106 389.0 292 66.8
Lalb_Chr24g0400371 Lupinus albus HOM05D004518 ORTHO05D005434 7.0e-106 387.9 294 67.7
Haze_20236 Corylus avellana HOM05D002003 ORTHO05D005434 1.2e-105 387.1 328 62.8
FvH4_6g25340 Fragaria vesca HOM05D004518 ORTHO05D005434 2.6e-105 386.0 294 67.0
Sed0017951 Sechium edule HOM05D004518 ORTHO05D005434 4.5e-105 385.2 293 68.3
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea HOM05D004518 ORTHO05D005434 5.9e-105 384.8 325 62.2
MBI13_g09215_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 7.7e-105 384.4 297 67.0
unitig_21.g20688 Utricularia gibba HOM05D004518 ORTHO05D005434 1.1e-103 380.6 296 64.9
FAN09G3120 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.9e-103 379.8 320 62.5
Thhalv10017035m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 1.6e-102 376.7 292 65.8
BraA05t19203Z Brassica rapa HOM05D004518 ORTHO05D005434 3.6e-102 375.6 301 66.4
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 4.7e-102 375.2 305 64.9
Sp4g23460 Schrenkiella parvula HOM05D004518 ORTHO05D005434 4.7e-102 375.2 294 65.6
Ciclev10012184m.g Citrus clementina HOM05D004518 ORTHO05D005434 1.8e-101 373.2 329 62.9
Eucgr.K01645 Eucalyptus grandis HOM05D004518 ORTHO05D005434 3.0e-101 372.5 295 66.8
Eucgr.A02232 Eucalyptus grandis HOM05D004518 ORTHO05D005434 5.2e-101 371.7 292 64.4
AL4G39130 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 6.7e-101 371.3 293 66.2
AT2G41160 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 2.6e-100 369.4 293 65.5
Aa31LG3G910 Aethionema arabicum HOM05D004518 ORTHO05D005434 1.3e-99 367.1 291 64.3
BolC4t21891H Brassica oleracea HOM05D004518 ORTHO05D005434 1.4e-98 363.6 302 64.6
CARHR136250 Cardamine hirsuta HOM05D004518 ORTHO05D005434 4.1e-98 362.1 298 62.8
Aa31LG3G900 Aethionema arabicum HOM05D004518 ORTHO05D005434 1.6e-97 360.1 310 61.0
CDE08G0004 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 5.9e-97 358.2 297 61.6
Carub.0004s2347 Capsella rubella HOM05D004518 ORTHO05D005434 1.0e-96 357.5 293 64.2
Peaxi162Scf00076g00330 Petunia axillaris HOM05D004518 ORTHO05D005434 5.0e-96 355.1 287 65.5
Gohir.A13G002100 Gossypium hirsutum HOM05D004518 ORTHO05D005434 8.5e-96 354.4 295 64.1
Nn7g36811 Nelumbo nucifera HOM05D004518 ORTHO05D005434 1.1e-95 354.0 271 65.7
A05p02070 Brassica napus HOM05D004518 ORTHO05D005434 1.5e-95 353.6 293 64.8
C04p02460 Brassica napus HOM05D004518 ORTHO05D005434 2.1e-94 349.7 294 63.9
BcaC02g12756 Brassica carinata HOM05D004518 ORTHO05D005434 3.6e-94 349.0 343 56.9
vmacro05025 Vaccinium macrocarpon HOM05D004518 ORTHO05D005434 3.6e-94 349.0 301 61.8
CAN.G128.73 Capsicum annuum HOM05D004518 ORTHO05D005434 6.1e-94 348.2 237 71.3
Potri.016G035800 Populus trichocarpa HOM05D004518 ORTHO05D005434 3.0e-93 345.9 295 62.7
HPP92_018980 Vanilla planifolia HOM05D004518 ORTHO05D005434 1.2e-92 344.0 295 60.3
Aqoxy2G00434 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 8.3e-91 337.8 234 67.9
Duzib128G0186 Durio zibethinus HOM05D004518 ORTHO05D005434 2.4e-90 336.3 236 70.8
QL07p011297 Quercus lobata HOM05D004518 ORTHO05D005434 6.5e-88 328.2 275 62.9
CDE08G0582 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 1.5e-87 327.0 295 61.0
Zm00001eb128690 Zea mays HOM05D004518 ORTHO05D005434 1.6e-86 323.6 295 57.6
Os01g0268800 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 2.7e-86 322.8 295 59.0
FAN02G2919 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.4e-85 320.5 236 67.8
Hund19087 Selenicereus undatus HOM05D004518 ORTHO05D005434 8.8e-85 317.8 294 59.2
Hund24582 Selenicereus undatus HOM05D004518 ORTHO05D005434 1.4e-82 310.5 292 59.2
AUR62030305 Chenopodium quinoa HOM05D004518 ORTHO05D005434 1.3e-80 303.9 292 56.8
Mapoly0023s0107 Marchantia polymorpha HOM05D004518 ORTHO05D005434 2.9e-80 302.8 308 53.2
SMO364G0164 Selaginella moellendorffii HOM05D004518 ORTHO05D005434 3.8e-80 302.4 308 56.8
Sc13g0001070 Simmondsia chinensis HOM05D004518 ORTHO05D005434 6.6e-80 301.6 205 74.6
AUR62018357 Chenopodium quinoa HOM05D004518 ORTHO05D005434 6.1e-78 295.0 292 56.5
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea HOM05D004518 ORTHO05D005434 1.4e-77 293.9 313 52.7
Psat3g079720 Pisum sativum HOM05D004518 ORTHO05D005434 1.3e-75 287.3 209 67.5
Pp3c15_13440 Physcomitrium patens HOM05D004518 ORTHO05D005434 3.2e-74 282.7 294 52.4
Sabra06G0027100 Salix brachista HOM05D004518 ORTHO05D005434 3.2e-74 282.7 274 59.1
Actinidia22259 Actinidia chinensis HOM05D004518 ORTHO05D005434 5.4e-74 282.0 217 69.1
DCAR_020579 Daucus carota HOM05D004518 ORTHO05D005434 9.2e-74 281.2 206 71.8
HPP92_001027 Vanilla planifolia HOM05D004518 ORTHO05D005434 1.6e-73 280.4 258 58.9
Aqoxy2G02076 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 1.6e-70 270.4 205 63.9
Pp3c9_17200 Physcomitrium patens HOM05D004518 ORTHO05D005434 1.0e-69 267.7 271 53.1
Lj1A1090G38 Lonicera japonica HOM05D004518 ORTHO05D005434 6.8e-69 265.0 288 55.2
TPR.G16082 Trifolium pratense HOM05D002003 ORTHO05D002037 1.3e-67 260.8 206 65.5
Zm00001eb150410 Zea mays HOM05D004518 ORTHO05D005434 1.7e-67 260.4 249 56.2
CDE02G2541 Ceratophyllum demersum HOM05D002603 ORTHO05D002907 1.1e-66 257.7 289 50.2
SGA_v2.0_scaffold66G22363 Striga asiatica HOM05D004518 ORTHO05D005434 4.1e-66 255.8 326 48.8
ATR0307G082 Amborella trichopoda HOM05D004518 ORTHO05D005434 1.0e-64 251.1 208 63.5
SHI48963 Sapria himalayana HOM05D004518 ORTHO05D005434 4.3e-63 245.7 367 42.2
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis HOM05D004518 ORTHO05D005434 5.6e-63 245.4 226 55.3
CBR_g11167 Chara braunii HOM05D004518 ORTHO05D005434 1.1e-58 231.1 317 42.0
Os01g0806000 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 1.1e-55 221.1 175 61.7
Lj2A402T37 Lonicera japonica HOM05D004518 ORTHO05D005434 7.3e-55 218.4 177 66.1
CBR_g18715 Chara braunii HOM05D004518 ORTHO05D005434 8.9e-53 211.5 333 39.3
Cpa.g.sc92.78 Carica papaya HOM05D004518 ORTHO05D005434 1.2e-44 184.5 122 74.6
Pp3c26_11360 Physcomitrium patens HOM05D004518 ORTHO05D005434 4.9e-43 179.1 331 36.9
MSTRG.5996 Avicennia marina HOM05D004518 ORTHO05D005434 1.7e-35 154.1 90 80.0
TPR.G27640 Trifolium pratense HOM05D004518 ORTHO05D005434 4.0e-29 132.9 101 65.3
SEGI_26369 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 1.2e-28 131.3 79 74.7
Cre08.g386050 Chlamydomonas reinhardtii HOM05D004518 ORTHO05D005434 4.5e-28 129.4 309 32.0
TAR369G0459 Trochodendron aralioides HOM05D004518 ORTHO05D005434 4.8e-22 109.4 101 57.4
BolC4t21949H Brassica oleracea HOM05D004518 ORTHO05D005434 7.1e-18 95.5 230 33.9
Dinv05308 Davidia involucrata HOM05D004518 ORTHO05D005434 7.1e-18 95.5 60 75.0
Psat3g079760 Pisum sativum HOM05D004518 ORTHO05D005434 7.9e-17 92.0 82 61.0
C04p03070 Brassica napus HOM05D004518 ORTHO05D005434 1.8e-16 90.9 258 31.8
MCO13G544 Micromonas commoda HOM05D004518 ORTHO05D005434 2.5e-15 87.0 329 26.7
FAN02G0789 Fragaria x ananassa HOM05D004518 ORTHO05D011253 1.4e-13 81.3 54 75.9
MBI19_g45264_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 1.4e-13 81.3 142 40.1
PGSC0003DMG400012448 Solanum tuberosum HOM05D004518 ORTHO05D005434 2.1e-09 67.4 42 66.7
PGSC0003DMG400010553 Solanum tuberosum HOM05D004518 ORTHO05D005434 1.0e-08 65.1 38 68.4


User provided reference genes

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