Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 1.4e-130 469.5 229 100.0
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 1.6e-113 412.9 229 87.8
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 9.7e-95 350.5 226 75.2
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 2.8e-94 349.0 226 74.8
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 1.1e-93 347.1 226 75.7
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 4.1e-93 345.1 226 75.7
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 6.9e-93 344.4 229 75.5
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 4.5e-92 341.7 226 74.8
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 1.3e-91 340.1 226 72.6
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 2.5e-90 335.9 226 72.1
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 3.2e-90 335.5 226 71.7
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 4.2e-90 335.1 225 72.9
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 9.4e-90 334.0 226 71.7
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 1.2e-89 333.6 227 70.5
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 1.2e-89 333.6 225 71.1
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 1.6e-89 333.2 226 71.2
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 2.1e-89 332.8 226 71.2
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 2.7e-89 332.4 226 71.2
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 2.7e-89 332.4 226 71.7
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 6.1e-89 331.3 226 71.7
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 1.0e-88 330.5 225 71.6
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 1.8e-88 329.7 225 72.0
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 2.3e-88 329.3 227 72.2
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 2.3e-88 329.3 226 71.2
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 3.9e-88 328.6 226 70.8
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 3.9e-88 328.6 226 70.4
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 8.8e-88 327.4 221 71.5
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 8.8e-88 327.4 226 70.4
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 1.5e-87 326.6 225 71.1
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 3.7e-86 322.0 216 71.8
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 4.8e-86 321.6 226 69.0
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 6.3e-86 321.2 222 68.9
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 1.4e-85 320.1 227 67.4
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 1.4e-85 320.1 225 69.8
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 3.1e-85 318.9 227 70.0
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 3.1e-85 318.9 224 71.4
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 2.6e-84 315.8 226 67.7
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 5.9e-84 314.7 227 70.5
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 7.7e-84 314.3 226 68.6
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 1.0e-83 313.9 290 58.6
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 1.0e-83 313.9 226 67.3
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 1.3e-83 313.5 224 68.3
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 3.8e-83 312.0 224 65.2
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 1.9e-82 309.7 222 68.5
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 4.2e-82 308.5 224 67.0
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 5.5e-82 308.1 230 65.2
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 7.2e-82 307.8 219 69.9
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 2.1e-81 306.2 228 65.4
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 3.6e-81 305.4 228 65.8
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 1.4e-80 303.5 226 65.5
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 5.1e-80 301.6 216 66.7
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 8.8e-80 300.8 216 66.7
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 8.8e-80 300.8 224 62.9
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 1.1e-79 300.4 232 66.4
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 1.1e-79 300.4 232 66.4
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 1.5e-79 300.1 223 63.7
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 2.0e-79 299.7 226 65.0
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 2.0e-79 299.7 226 64.6
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 4.4e-79 298.5 226 65.5
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 4.4e-79 298.5 233 64.8
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 1.1e-77 293.9 221 63.8
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 1.8e-77 293.1 217 65.9
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 3.1e-77 292.4 203 69.5
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 4.1e-77 292.0 233 63.5
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 9.1e-77 290.8 224 63.4
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 1.2e-76 290.4 213 65.7
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 1.2e-76 290.4 217 65.4
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 1.2e-76 290.4 212 65.6
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 2.0e-76 289.7 227 64.8
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 5.9e-76 288.1 216 66.2
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 7.7e-76 287.7 216 65.3
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 1.0e-75 287.3 216 65.3
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 1.0e-75 287.3 228 62.7
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 1.7e-75 286.6 217 65.4
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 5.0e-75 285.0 217 65.0
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 5.0e-75 285.0 217 65.0
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 6.5e-75 284.6 217 64.5
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 1.1e-74 283.9 217 64.5
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 3.2e-74 282.3 216 63.9
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 4.2e-74 282.0 223 63.7
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 4.2e-74 282.0 223 61.0
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 5.5e-74 281.6 189 70.4
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 2.7e-73 279.3 217 63.1
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 1.0e-72 277.3 227 61.2
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 1.8e-72 276.6 216 63.0
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 6.7e-72 274.6 199 65.8
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 2.0e-71 273.1 253 54.2
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 2.6e-71 272.7 277 51.3
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 3.3e-71 272.3 274 54.0
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 4.4e-71 271.9 175 73.7
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 1.6e-68 263.5 188 63.8
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 2.0e-68 263.1 187 65.8
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 1.3e-67 260.4 226 60.6
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 2.5e-66 256.1 187 66.8
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 1.4e-64 250.4 222 54.1
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 8.8e-64 247.7 223 52.9
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 3.4e-63 245.7 165 70.9
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 4.1e-61 238.8 222 53.6
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 3.8e-59 232.3 224 52.2
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 5.7e-55 218.4 152 65.1
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 1.6e-52 210.3 183 58.5
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 6.3e-46 188.3 143 63.6
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 1.9e-42 176.8 222 40.5
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 3.3e-34 149.4 120 60.0
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 5.2e-32 142.1 177 43.5
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 9.5e-26 121.3 204 38.2
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 1.2e-25 120.9 208 37.0
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 1.8e-24 117.1 136 51.5
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 9.9e-23 111.3 210 31.9
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 4.9e-22 109.0 213 34.3
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 4.3e-18 95.9 186 31.7
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 2.8e-17 93.2 167 33.5
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 9.9e-15 84.7 115 43.5
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 4.2e-13 79.3 77 50.6
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 2.3e-11 73.6 66 53.0
TPR.G24733 Trifolium pratense HOM05D007231 ORTHO05D009024 2.3e-11 73.6 48 75.0


User provided reference genes

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